Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo16g00540 | ATGCCTGTTCGTAACACTATGCACTCTTATTTTTATTCTCGTGATACCTTTGTGTCATTTGACAAGGTTCTTCTTGTATCATGGGTTCTCAAGGCTATTGACTATACACCTCCAAGGCTACAGTTTGAGAACTCATGCGAAATTGGTGTGTTTTCTAAGCTCACAAATGCTTACTGTTTGGTTGCCATTGGTGGCTCGGAGAACTTCTACAGTACTTTCGAAGCTGAATTAGCAGATGTGATTCCTGTTGTTAAGACCTCTATTGGAGGCACTCGAATTATTGGCCGCCTCTGTGCTGGTAACAAAAATGGGCTTCTTGTTCCCCATACAACCACTGATCAAGAACTTCAGCATTTGAGGAACAGTCTACCTGATCAAGTGGTTGTTCAGCGCATAGATGAGAGGCTATCAGCTCTGGGAAATTGTATCGCATGCAATGACCATGTTGCTCTGACCCACACTGATCTTGACAGGGAAACTGAGGAAATGATTGCAGATGTTCTTGGAGTAGAAGTATTTAGGCAGAGTGTGGCTGGTAATATCCTTGTGGGAAGTTACTGTGTCTTTTCTAACACGGGTGGCCTGGTACATCCCCATACCTCGATTGAAGATTTGGATGAACTCTCAACGCTTCTTCAAGTCCCCTTGGTGGCAGGCACTGTGAACCGTGGTAGTGAAGTTATTGCTGCGGGCGTTACAGTGAATGACTGGACTGCCTTTTGCGGATCTGACACTACAGCAACTGAGCTCTCGGTCATAGAGAGCGTATTCAAGTTGAGAGAGGCTCAACCAAGCGCAATAGCCGACGAGATGAGAAAATCTCTCATCGACAGTTACGTATGA | 843 | 45.2 | MPVRNTMHSYFYSRDTFVSFDKVLLVSWVLKAIDYTPPRLQFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQSVAGNILVGSYCVFSNTGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGVTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIADEMRKSLIDSYV | 280 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 22268824 | 22273189 | - | BLOR07788 | Blo16g00540 | 71731 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo16g00540 | 280 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 6 | 39 | 280 | IPR002769 | GO:0042256|GO:0043022 | |
Blo16g00540 | 280 | CDD | IF6 | 39 | 258 | IPR002769 | GO:0042256|GO:0043022 | |
Blo16g00540 | 280 | SMART | eIF6neu2 | 38 | 239 | IPR002769 | GO:0042256|GO:0043022 | |
Blo16g00540 | 280 | SUPERFAMILY | Pentein | 39 | 259 | - | - | |
Blo16g00540 | 280 | Pfam | eIF-6 family | 39 | 238 | IPR002769 | GO:0042256|GO:0043022 | |
Blo16g00540 | 280 | Gene3D | - | 38 | 260 | - | - | |
Blo16g00540 | 280 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 6 | 39 | 280 | - | - | |
Blo16g00540 | 280 | TIGRFAM | eIF-6: putative translation initiation factor eIF-6 | 39 | 259 | IPR002769 | GO:0042256|GO:0043022 | |
Blo16g00540 | 280 | Hamap | Translation initiation factor 6 [eif6]. | 25 | 280 | IPR002769 | GO:0042256|GO:0043022 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo04g00952 | Blo16g00540 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo16g00540 | Blo-Chr16:22268824 | Blo04g00952 | Blo-Chr4:11576432 | 1.67E-167 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo16g00540 | K03264 | - | han:110895539 | 462.225 |