Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00540 ATGCCTGTTCGTAACACTATGCACTCTTATTTTTATTCTCGTGATACCTTTGTGTCATTTGACAAGGTTCTTCTTGTATCATGGGTTCTCAAGGCTATTGACTATACACCTCCAAGGCTACAGTTTGAGAACTCATGCGAAATTGGTGTGTTTTCTAAGCTCACAAATGCTTACTGTTTGGTTGCCATTGGTGGCTCGGAGAACTTCTACAGTACTTTCGAAGCTGAATTAGCAGATGTGATTCCTGTTGTTAAGACCTCTATTGGAGGCACTCGAATTATTGGCCGCCTCTGTGCTGGTAACAAAAATGGGCTTCTTGTTCCCCATACAACCACTGATCAAGAACTTCAGCATTTGAGGAACAGTCTACCTGATCAAGTGGTTGTTCAGCGCATAGATGAGAGGCTATCAGCTCTGGGAAATTGTATCGCATGCAATGACCATGTTGCTCTGACCCACACTGATCTTGACAGGGAAACTGAGGAAATGATTGCAGATGTTCTTGGAGTAGAAGTATTTAGGCAGAGTGTGGCTGGTAATATCCTTGTGGGAAGTTACTGTGTCTTTTCTAACACGGGTGGCCTGGTACATCCCCATACCTCGATTGAAGATTTGGATGAACTCTCAACGCTTCTTCAAGTCCCCTTGGTGGCAGGCACTGTGAACCGTGGTAGTGAAGTTATTGCTGCGGGCGTTACAGTGAATGACTGGACTGCCTTTTGCGGATCTGACACTACAGCAACTGAGCTCTCGGTCATAGAGAGCGTATTCAAGTTGAGAGAGGCTCAACCAAGCGCAATAGCCGACGAGATGAGAAAATCTCTCATCGACAGTTACGTATGA 843 45.2 MPVRNTMHSYFYSRDTFVSFDKVLLVSWVLKAIDYTPPRLQFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQSVAGNILVGSYCVFSNTGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGVTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIADEMRKSLIDSYV 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 22268824 22273189 - BLOR07788 Blo16g00540 71731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00540 280 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 39 280 IPR002769 GO:0042256|GO:0043022
Blo16g00540 280 CDD IF6 39 258 IPR002769 GO:0042256|GO:0043022
Blo16g00540 280 SMART eIF6neu2 38 239 IPR002769 GO:0042256|GO:0043022
Blo16g00540 280 SUPERFAMILY Pentein 39 259 - -
Blo16g00540 280 Pfam eIF-6 family 39 238 IPR002769 GO:0042256|GO:0043022
Blo16g00540 280 Gene3D - 38 260 - -
Blo16g00540 280 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 39 280 - -
Blo16g00540 280 TIGRFAM eIF-6: putative translation initiation factor eIF-6 39 259 IPR002769 GO:0042256|GO:0043022
Blo16g00540 280 Hamap Translation initiation factor 6 [eif6]. 25 280 IPR002769 GO:0042256|GO:0043022
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00952 Blo16g00540 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00540 Blo-Chr16:22268824 Blo04g00952 Blo-Chr4:11576432 1.67E-167 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00540 K03264 - han:110895539 462.225