Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00544 ATGGATATTGTAGAGTCTACACTCGACCTTACAGTTCAGAATCCAGAGGTGGAGGAGTTTTCTTCTGCTAATTTAACTTGGACCAAGTTTGGGAACGCAAAACATTATGAGGAAGTAGCCCTGATTCCATACGCGCGTGTAGATGAGTTTATTATCGGTGAATGCTCGAACGTTGAGTGCCCAACTAGATTTCATATCGAGAGGGGAAGAAAACGCTCAAAGGGTAGCTTGAAAGAGTTCAAGAGTGATGAATACTTGGAATACCGAATGTATTGGTGCTCTTTTGGTCCTGAAAATTATGGAGAGGGTGGAGGTATATTGCCTAGTAGAAGATATCGGCTCAATACACGAAATCGTGCTGCTAGACCTCAATCAATGCGAGGCTGCACATGCCATTTTGTGGTGAAGAGGTTGTATGCACGTCCTTGGCTGGCACTTCTCATCTACAGTGAGAGGCGTCATGTAAATAATTCTGGCTTTGTTTGCCATGGTCCACTTGATAGGGATGCAATTGGCCCAGGTGCTGGTAAAGTTCCTTATATCTGTAACGAGATTCAACAACAAACTATGTCTATGATTTATCTGGGTATTCCTGAAGCCAACATTGTAGAGAAGCATCTTGAGGGACTTCAGCGATATTGTGGTCCAAATGCAAAAGTCAATAGTCTTGCTTCCCAATATGTTCATAAACTTGGAATGATTATTAAGCGGTCAAGTCATGAGTTGGATTTGGACGATCAAGCTAGCATCAAAATGTGGGTTGAACGCAATAAGAAGTCCATCTTTGTCTATCAGGATGCTTCGGAATCGGATTCTTTCATTCTTGGAATTCAAACGGACTGGCAATTGCAACAAATGATTCGATTTGGCGATGGTAGTCTTATTGCTGCTGATTCGACATTTGGCATCAAGAGACTAAAGTACCCGCTCTGCACACTTCTAGTTTTTGACTCAAGACAACATGCACTCCCAGTTGCCTGGGTTATCACTCGTAGCTTTGCAAGGCCAGATGTTTCTAAGTGGATGAAAGCTCTTCTAACTCGAGCACACATGGTGGATCCTGGCTGGAAGATCAGTGGTTTTCTAATTGACGATGCAGCAACAGAGATTGATACAATCAGGCATGATTTTTGTGCTTCTAGTACCTTTCTTACGGATGTATTTTGTTGCCCTATACTTTTTTCTTTGTGGCGCATCCGTAGATCATGGCTAAGGAATATTGTTAAGAGATGCAGTAACACTGAAATTCAGCGGGAAATGTTTAAACGTCTTGGAGAAATTGTGTACAGCATTTGGAGAGAAGTTGATACCATGATTGTCTTGGAAGAATTCACTCATGATTTTGCAGATCAAACATTATTCATGGAATATTTTAAAGGCTCTTGGGTGCCAAAGATTGAAATGTGGCTTTCATCAATGAAGAGTCTTCCGCTTGCAAGCCAGGAATCATCTGGTGCTATCGAATCCTATCATGTAAAGCTAAAAGCAAAACTATTTGATGATTCACATCTTGGAGCTCTGGAAAGAGTAGATTGGTTGGTCCACAAGCTGACTACCGAGTTGCATTCCAGTTATTGGCTAGATCGATATGCAGATGAAAGTGATTCTTTTCAAAATGTCAAGGAGGAATATATTGCTTCTACTTCCTGGCATCGGGCTCGTCAAATCCCAGATTCTGCAGTTTCATTGGATGATAAAGATCACCTTTTCGCAAAGGTTTTAAGCCAAAAAGACAGAAATCTAACTAACTTGGTATGGAATCCTGGCTCAGAATTTTCCTTTTGTGATTGTGCATGGTCAAAGGAAGGAAATCTTTGCAAGCACGTGATAAAGGTAAATATGATCTGTGAGACTCATCAAGGTTTCCAGGCGTCAATGTCCTTCCAATCATACAAGAAAATTTTAATGAATTTGTGTGAATTACCGCCAGATGATTCAGTTTCTTTAGACCTGTCTATGGCATTGACCCACCAGATGCTTGATCAAATTCAGAAACTTGTTGAGCTACATAGTTCAGAAAATATTAGTGCAGTTGTGAATAAACTACCATTGAAATGGGTTTCTAAGAAGGGAAGAACCTCCATTGGCAAGCCATCATCTACTATATCTCTTCTAGCCAATTCTAAAGTTACTAAGAAAGCTCCTGCAAAAAAGCATAGAAAGCGGAAGAGATTGTCGAGATTAAGGAAATCTCACCTTATCCACACTCTCACCACAACCTTTCATCACCTTCATAATCACTCCCTCTTTAAAACCCATGATCCCGAAAACACCACCTCACCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACAAACAACCTTCCCTCCAATGGCAACAGTCAGCTCAGCCAATCTGTCCTGCAGCTATGCCCTTTCTGGAGTTGGACAATCCGAGCTCTCAAAGCTCAACACAAAGCCGTCAATGGCTTCCCCTGTCGGGGCAGGTCGGAAATTGCCATTGATCAGAGCTCAGCAAAGCAAGGCTTCAAATTCCCATGAATCAAAAGGAAATGAAGGAAGAAGGGCTGCTCTTACCTTCCTGGCTGCATCCATTTTTGCATCTGTTGCTGCTGCTTCTAACTCATCTGCAAATGCTGGAATCATTGAAGAATACCTTGAGAAGAGTAAAGCAAATAAGGAACTGAATGACAAGAAAAGGTTGGCAACAAGTGGTGCAAACTTTGCAAGAGCATACACTGTTCAGTTCGGAACCTGCAAATTCCCCGAGAATTTCACTGGCTGCCAAGATCTTGCTAAGCAAAAGAAAGTTCCATTTTTGAGTGAGGACTTGGCGCTTGAATGTGAAGGTAAAGACAAGTACAAGTGTGGTTCCAACGTCTTCTGGAAATGGTGA 2859 41.87 MDIVESTLDLTVQNPEVEEFSSANLTWTKFGNAKHYEEVALIPYARVDEFIIGECSNVECPTRFHIERGRKRSKGSLKEFKSDEYLEYRMYWCSFGPENYGEGGGILPSRRYRLNTRNRAARPQSMRGCTCHFVVKRLYARPWLALLIYSERRHVNNSGFVCHGPLDRDAIGPGAGKVPYICNEIQQQTMSMIYLGIPEANIVEKHLEGLQRYCGPNAKVNSLASQYVHKLGMIIKRSSHELDLDDQASIKMWVERNKKSIFVYQDASESDSFILGIQTDWQLQQMIRFGDGSLIAADSTFGIKRLKYPLCTLLVFDSRQHALPVAWVITRSFARPDVSKWMKALLTRAHMVDPGWKISGFLIDDAATEIDTIRHDFCASSTFLTDVFCCPILFSLWRIRRSWLRNIVKRCSNTEIQREMFKRLGEIVYSIWREVDTMIVLEEFTHDFADQTLFMEYFKGSWVPKIEMWLSSMKSLPLASQESSGAIESYHVKLKAKLFDDSHLGALERVDWLVHKLTTELHSSYWLDRYADESDSFQNVKEEYIASTSWHRARQIPDSAVSLDDKDHLFAKVLSQKDRNLTNLVWNPGSEFSFCDCAWSKEGNLCKHVIKVNMICETHQGFQASMSFQSYKKILMNLCELPPDDSVSLDLSMALTHQMLDQIQKLVELHSSENISAVVNKLPLKWVSKKGRTSIGKPSSTISLLANSKVTKKAPAKKHRKRKRLSRLRKSHLIHTLTTTFHHLHNHSLFKTHDPENTTSPFSLSLSLSLSLQTTFPPMATVSSANLSCSYALSGVGQSELSKLNTKPSMASPVGAGRKLPLIRAQQSKASNSHESKGNEGRRAALTFLAASIFASVAAASNSSANAGIIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFLSEDLALECEGKDKYKCGSNVFWKW 952
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 22431760 22437027 + BLOR07792 Blo16g00544 71735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00544 952 Gene3D - 868 952 IPR044907 -
Blo16g00544 952 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 822 952 IPR008796 GO:0009522|GO:0015979
Blo16g00544 952 PANTHER OS09G0309100 PROTEIN 1 729 - -
Blo16g00544 952 PANTHER ZINC ION BINDING PROTEIN 1 729 - -
Blo16g00544 952 ProSiteProfiles Zinc finger SWIM-type profile. 580 617 IPR007527 GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00917 Blo-Chr1:20254638 Blo16g00544 Blo-Chr16:22431760 0 dispersed
Blo16g00544 Blo-Chr16:22431760 Blo16g00705 Blo-Chr16:27057301 1.42E-70 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00544 - - vvi:100247174 1195.65