Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00554 ATGAACTTGATTGGCGATGCCACAGTCGGCGAATCCGCCATCGGAAGTGGCCGGACGGTGGTTGTCGGTGTCAAGTTGGAGTTGGAAAGCCGGGAATTGCTCACTTGGACTCTTCTTAAAGTGGCTCAGCCTGGTGACCTTGTCATTGCACTTCACGTCCTCGATGCCTTCACTGAGACTCCGTCGTCGCTGCTATCTTTGGTGAAGGAGTTGCATTCCGTTCTGTCAGTGTACGAAACTTTCTGCAACCTGAAGCAGGTATGTTTGAAACTGAAGGTATGCCGTGGATCTCCTGTTCATAAAATCATCAAACGAGAAGTTGAATCGTTTGATGAGGCCATAGTAATTGTTGGAATTTCCAAATCTCGCCATAGAATTCATTCATCTGCATCTGTTGCCAAGTATTGTGCAAGAAGATTATCCAAAAAATTTCAAATTCTTGCAGTTAACAATGGCAAAATTTTGTTTCGTAGAGAAGTAACTCTATCTGCCCACAAAGTTCAAGATAAGGATGGCAATGGAAATTGTGTTGGCTTTGTTCGCTATTCACCCAGTCAGAGATTTGAAGTACTTGATAGTAAAAAGGCTTCAACGACGGATGTAAAGGAGGATGGCATTCCCCGTCATTTGTTACTAAAATATGTTTCAGGTTTGAAGAAATATCTAAAGGGAAATGTGACTAATGAAAAAGCTTTGAGCGGATCTGAAAATAATGATGCTCGGGTGATGAATGAGCCACCCTCATCTAGCAATGACAGTGAGGGCAATTCATCTACTTTGGTACCATGGCGACAATCACTGCAAAGAAATACCAGCTGGCCAAACCTTCGTCGGATTTTTTTATCAAAGAAACATTTGAGAACAATGTCTATGACCGAGGATTTTTGTTCTTCATCTATTGCAAATTCAGATCTGGAACAGTGCAAATCTGATCTGGATCAATGTTCAAATGTTGACAGGGAGGATGCTTCTTTTCCGTCCATCACGGCTACTCATCAATCTTTAGGAAGCCTTCCAGAAGAGTTATTGTCATTGACTAATAAGTGCTCCTGCACTTGCAGATTATTTACCTATGAGGAACTTTCGTCAGCAACCTCAAACTTCATTCCCGAGAATATGGTGGGTAAAGGCGGTAGTAGCCATGTTTATAGGGGTTGTCTTCCAGATGGCAATGAACTGGCAGTGAAGATCTTAAAACCATCTGGAGATGTCCTTAAAGAGTTTGTACAGGAAATTGAAATCATAACATCTTTACGTCACAAGAACATTATATCTTTATCTGGTTTCTGTTTTGAGGACCTTAAATTACTCTTGGTATACAATTTTCTGTCAAGAGGGAGCTTAGAAGAGAATCTTCATGGTAACAAAAAGGATTCAAGTACATTTGGTTGGCAAGAGAGATTTAAGGTCGCTCTTGGAGTAGCAGAGGCTGTAGACTATCTCCACCATGGATGTGATGAACCTGTGATTCACAGAGACGTGAAGTCCTCTAACATTCTTCTCACACGGGATTTCGAGGCGAAACTTTCAGATTTTGGTCTTGCCAGCTGGGCTTCCTCATCATCCCATATAATTTGCACTGATATTGCTGGAACATTTGGGTACCTCGCTCCAGAGTACTTCATGTATGGCAAAGTAAGTGAGAAAATTGATATATATGCATTTGGTGTCGTACTCCTGGAATTACTTTCAGGTCGGAAACCGATCAACAGTGACAATCCCAGGGGACAAGAAAGCCTTGTAATGTGGGCTATGCCGATATTGAAGGAAGGGAAAATTTCTCAGTTATTGGATCCTTGCCTAGGAAGTTATTACAACCAGGATCAGATAGGAAGAATGATATTAGCTGCCACCCTCTGCATTAGACGCTCCCCTAAGTTACGTCCTAAAATGGCTCTTGTTTTGAAACTTTTACAAGGCGATGAGCAAGTAAATAATTGGGCAAGGCGGCAGGTTCACCAAATGGAAGAACTCGAAGCCATTGATGGAGAACCATTAGCTTCTAACATACAATCCCACCTCAACCTTGTTTTTGTAGATTTCCATGACGATTCTCTTTCGGTTAACAGCAACGAGCAATGCATCTCCGTAGAAGATTACTTGCGAGGGAGATGGAGCCGCTCATCTAGCTTCACTTAG 2139 42.12 MNLIGDATVGESAIGSGRTVVVGVKLELESRELLTWTLLKVAQPGDLVIALHVLDAFTETPSSLLSLVKELHSVLSVYETFCNLKQVCLKLKVCRGSPVHKIIKREVESFDEAIVIVGISKSRHRIHSSASVAKYCARRLSKKFQILAVNNGKILFRREVTLSAHKVQDKDGNGNCVGFVRYSPSQRFEVLDSKKASTTDVKEDGIPRHLLLKYVSGLKKYLKGNVTNEKALSGSENNDARVMNEPPSSSNDSEGNSSTLVPWRQSLQRNTSWPNLRRIFLSKKHLRTMSMTEDFCSSSIANSDLEQCKSDLDQCSNVDREDASFPSITATHQSLGSLPEELLSLTNKCSCTCRLFTYEELSSATSNFIPENMVGKGGSSHVYRGCLPDGNELAVKILKPSGDVLKEFVQEIEIITSLRHKNIISLSGFCFEDLKLLLVYNFLSRGSLEENLHGNKKDSSTFGWQERFKVALGVAEAVDYLHHGCDEPVIHRDVKSSNILLTRDFEAKLSDFGLASWASSSSHIICTDIAGTFGYLAPEYFMYGKVSEKIDIYAFGVVLLELLSGRKPINSDNPRGQESLVMWAMPILKEGKISQLLDPCLGSYYNQDQIGRMILAATLCIRRSPKLRPKMALVLKLLQGDEQVNNWARRQVHQMEELEAIDGEPLASNIQSHLNLVFVDFHDDSLSVNSNEQCISVEDYLRGRWSRSSSFT 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 22812215 22815736 - BLOR07802 Blo16g00554 71745

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00554 712 SUPERFAMILY Protein kinase-like (PK-like) 350 638 IPR011009 -
Blo16g00554 712 Pfam Universal stress protein family 18 141 IPR006016 -
Blo16g00554 712 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 14 706 - -
Blo16g00554 712 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 140 - -
Blo16g00554 712 ProSiteProfiles Protein kinase domain profile. 368 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00554 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Blo16g00554 712 Pfam Protein kinase domain 372 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00554 712 Gene3D Transferase(Phosphotransferase) domain 1 443 657 - -
Blo16g00554 712 PANTHER OS01G0253100 PROTEIN 14 706 IPR045271 GO:0004714|GO:0006468
Blo16g00554 712 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524
Blo16g00554 712 SMART serkin_6 368 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00554 712 Gene3D Phosphorylase Kinase; domain 1 336 442 - -
Blo16g00554 712 MobiDBLite consensus disorder prediction 229 259 - -
Blo16g00554 712 CDD USP_Like 19 139 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00554 - - - mcha:111017492 800.045
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo06g00187 Blo16g00554 CCT
Blo06g00187 Blo16g00554 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00526 Blo-Chr5:9741036 Blo16g00554 Blo-Chr16:22812215 0 dispersed
Blo06g00187 Blo-Chr6:7864244 Blo16g00554 Blo-Chr16:22812215 0 dispersed
Blo15g00396 Blo-Chr15:5541042 Blo16g00554 Blo-Chr16:22812215 1.01E-69 dispersed
Blo16g00554 Blo-Chr16:22812215 Blo17g00166 Blo-Chr17:1676419 0 dispersed
Blo16g00554 Blo-Chr16:22812215 Blo18g00172 Blo-Chr18:1660993 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1322 . Blo16g00554 . . . Bpe13g00054 . Bma15g00776 Cmo02g00650 Cmo20g01056 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo06g00187 . . Bpe10g00266 Bpe06g00305 . Bma06g00472 . . . . Cma20g01050 . . Cpe05g01044 Cpe16g00096 Bhi10g01716 . . . . . . Cla02g00030 . . . . . . Lsi10g00758 . . Cme11g00032
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005017 2 1 2 3 2 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 0 1 1 1 0 0 1 38
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84752 PF00069 Pkinase 1.40E-42 CL0016 Blo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g00554 Blo_Chr16 FPKM 22.330624 23.068878 5.82443 5.690312 53.436974 52.879601 55.817818 2.453293 2.505787 2.381367