Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00563 ATGCAGCTTGCAAACCTGTTTCAGCTTTGCAATTTTGTTTTCCACATGTTGACCTTGAGGGCAAGGTTTGTTCCAGCGGGGGGAGTTTCAATAACTGGAAGGGGAGCTGAGGAGAGATTATCAGCTAAGCGAGATAAAAATCATTTATTATTTGGTGGAACAAAAATATTGCAGCATACCCCAGATAAGAATTTTCCTCTTAAAAGTCCTGATGGTGGCTGCGTGGCAGTTGTTTTAAGAACCGGTTTTGAAACAAGTCAGGGAAAGCTAATGCGGACAATTCTGTTTTCTACAGAAAGAGTTACTGCAAACAGCTGGGAAAGTGGACTTTTCATTTTATTCTTAGTCATATTTGCGGTAATAGCTGCAGGTTATGTACTTAAAAAGGGACTGGAGGATCCTACTCGGAGCAAATACAAACTTTTTCTTAGTTGTTCTCTCATTATTACCTCTGTGATCCCACCTGAGCTGCCAATGGAATTGTCAATTGCTGTCAATACATCCTTGATTGCGCTTGCCAGACGAGGAATATTTTGCACGGAGCCTTTCCGAATTCCATTTGCTGGAAAGGTTGATATTTGTTGCTTTGACAAAACTGGAACCTTAACATCAGATGATATGGAGTTCCGCGGAGTTGTTGGGTTGGATGCTGCTATGAATTCTGAAATGGATCTGTCCAGAGTACCTTTGCGCACTATGGAAATTCTAGCCTCTTGTCACGCCTTGGTGTTTGTGGACAATAAGCTGGTTGGAGATCCTCTTGAAAAGGCCGCACTTAAGGGAATAGATTGGTCATACAAGTCGGACGAAAAGGCCACGCCAAAAAAGGGAAGTGGTCATGCTGTGCAGATTGTTCAGAGACACCACTTTGCTTCCCATTTGAAGCGAATGGCAGTTGTTGTTCGGGTCCAGGAGGAGTTTTTTTCTTTTGTCAAGGGTGCCCCCGAAACTATCCAAGAACGACTCATTGATGTGCCTCAATCATATGTTGAAACATACAAGAAATATACAAGACAAGGATCCCGTGTTTTGGCACTTGCTTTCAAGTCTATTCCAGATATGACAGTTAGTGAAGCTAGAAGCTTGGATAGGGATAAAGTGGAGAGTGACCTTAACTTCGCTGGTTTTGCGGTATTTAACTGTCCGATTAGGGCTGATTCAGCTAAAGTTTTGTCTGAATTAGGTGGATCATCACATGACATGGTGATGATAACTGGTGATCAGACTTTAACAGCTTGCCATGTGGCTGGCCAAGTGCATATCATATCCAAACCAGCATTAATTCTTACCCAGAAAAGGAAACGGGAAGGATATGAGTGGATATCCCCTGATGAGAAGGAGACAATTCCATACAGCGAGAAAGAGGTTGAAACATTATCAGAGACTCGTGATCTCTGTATTGGAGGTGATAGCATTCAAATGCTACAGGAGACCTCTGCCGTTCTAAGAGTTGTTCCATATGTTAAGGTATTTGCCAGAGTTGCTCCTGAGCAAAAAGAACTCATTATGACTACTTTTAAAACGGTGGGGAGGATGACGCTTATGTGTGGGGATGGAACAAATGACGTGGGAGCTTTGAAACAAGCTCATGTGGGAGTTGCTCTATTAAATGCTGTGCCTCCTATTCAAAGTGACAACTCTTCTTCAGAAACATCTAAGGATGAAAAAGCAAAACCTGGCAAAGCAAAGAAAACTAAGTCAGTATTGGATGTAGCTGGAAAGCCTATCAGTCTAAATGGGGAAAGTCCTCCTAAGGGGAAAGTGACTGCAAAGACGGATTCCACAACCCACCACCCAGGGGGTCGCCATTTGACGGCTGCAGAGATGCAGAGGCAGAAGCTAAAGAAGATGATGGATGAACTAAATGAGGAGGGCGATGGACGTGCAGCGCCCATTGTCAAGCTCGGGGACGCCTCCATGGCTTCTCCATTCACAGCAAAGCATGCCTCAGTTGCTCCCACCACTGACATAATTCGTCAGGGTAGGAGCACTCTTGTGACCACCCTCCAAATGTTCAAAATACTTGGACTCAACTGTCTCGCCACAGCATACGTGCTGAGTGTAATGTATTTGGACGGTGTGAAATTGGGGGACATCCAAGCCACCATAAGCGGAGTATTCACAGCCGCATTTTTCCTTTTCATCTCACATGCCCGGCCACTTCCGACACTCTCGGCCGAAAGGCCTCATCCCCATGTCTTTTGCTCCTATGTCTTACTTTCTCTATTGGGTCAGTTTGCAATTCACATAGTTTTCTTGATTTCTTCAGTGAAGGAAGCCGAGAAACACATGCCCGATGAATGCATAGAGCCAGACTCAGAATTTCATCCGAATTTGGTAAACACAGTTTCATACATGGTGAGCATGATGCTTCAGGTGGCCACTTTTGCTGTGAATTACATGGGCCACCCATTCAACCAGAGCATCTCAGAGAACAAGCCGTTCTGTTGCGCACTGTTGGGTGCTGTCGTTTTCTTCACAGTCATAACTTCTGACCTGTTTCGAAATCTGAATGATTGGTTGAAATTGGTTCCTTTGCCTGTGGGATTGAGAGACAAACTTTTGCTTTGGGCTGTGCTCATGTTTTTGTGCTGCTACTCATGGGAGAGACTCTTGAGATGGGCCTTCCCGGGTAAAATCCCTGCATGGAAGAAACGACAACGGCTGGCCTCTACTAATTTAGATAAGAAGCGAGTCTGA 2700 44.59 MQLANLFQLCNFVFHMLTLRARFVPAGGVSITGRGAEERLSAKRDKNHLLFGGTKILQHTPDKNFPLKSPDGGCVAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVIFAVIAAGYVLKKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFRGVVGLDAAMNSEMDLSRVPLRTMEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKATPKKGSGHAVQIVQRHHFASHLKRMAVVVRVQEEFFSFVKGAPETIQERLIDVPQSYVETYKKYTRQGSRVLALAFKSIPDMTVSEARSLDRDKVESDLNFAGFAVFNCPIRADSAKVLSELGGSSHDMVMITGDQTLTACHVAGQVHIISKPALILTQKRKREGYEWISPDEKETIPYSEKEVETLSETRDLCIGGDSIQMLQETSAVLRVVPYVKVFARVAPEQKELIMTTFKTVGRMTLMCGDGTNDVGALKQAHVGVALLNAVPPIQSDNSSSETSKDEKAKPGKAKKTKSVLDVAGKPISLNGESPPKGKVTAKTDSTTHHPGGRHLTAAEMQRQKLKKMMDELNEEGDGRAAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDIQATISGVFTAAFFLFISHARPLPTLSAERPHPHVFCSYVLLSLLGQFAIHIVFLISSVKEAEKHMPDECIEPDSEFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSISENKPFCCALLGAVVFFTVITSDLFRNLNDWLKLVPLPVGLRDKLLLWAVLMFLCCYSWERLLRWAFPGKIPAWKKRQRLASTNLDKKRV 899
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 23058144 23068129 - BLOR07811 Blo16g00563 71754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00563 899 Coils Coil 604 624 - -
Blo16g00563 899 SFLD Haloacid Dehalogenase 176 663 - -
Blo16g00563 899 ProSitePatterns Hypothetical cof family signature 2. 516 538 - -
Blo16g00563 899 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 484 535 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo16g00563 899 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 110 217 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo16g00563 899 SUPERFAMILY HAD-like 190 543 IPR036412 -
Blo16g00563 899 Gene3D - 205 377 IPR023299 GO:0000166
Blo16g00563 899 SUPERFAMILY Calcium ATPase, transmembrane domain M 110 877 IPR023298 -
Blo16g00563 899 TIGRFAM P-ATPase-V: P-type ATPase of unknown pump specificity (type V) 24 857 IPR006544 GO:0006812|GO:0016021|GO:0019829|GO:0140358
Blo16g00563 899 MobiDBLite consensus disorder prediction 549 568 - -
Blo16g00563 899 ProSitePatterns E1-E2 ATPases phosphorylation site. 197 203 IPR018303 -
Blo16g00563 899 SFLD p-type atpase 176 663 IPR044492 -
Blo16g00563 899 MobiDBLite consensus disorder prediction 541 602 - -
Blo16g00563 899 PANTHER CATION-TRANSPORTING ATPASE-RELATED 23 891 - -
Blo16g00563 899 PRINTS P-type cation-transporting ATPase superfamily signature 516 535 - -
Blo16g00563 899 PRINTS P-type cation-transporting ATPase superfamily signature 397 407 - -
Blo16g00563 899 PRINTS P-type cation-transporting ATPase superfamily signature 195 209 - -
Blo16g00563 899 Pfam haloacid dehalogenase-like hydrolase 192 420 - -
Blo16g00563 899 Gene3D - 28 95 - -
Blo16g00563 899 Gene3D - 378 551 IPR023214 -
Blo16g00563 899 PANTHER CATION-TRANSPORTING ATPASE 23 891 - -
Blo16g00563 899 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 201 385 IPR023299 GO:0000166
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00563 Blo-Chr16:23058144 Blo04g00700 Blo-Chr4:6403840 4.37E-15 dispersed
Blo16g00563 Blo-Chr16:23058144 Blo12g00987 Blo-Chr12:27907713 1.38E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00563 K14950 - jre:108982215 1485.7