Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00581 ATGTTGACGGATTGGGAAAAATGGCAATGGCGTAGGAGAATATTAGCCATGTGGGGGAATTTGGCTACAGCGAATCCGTCGATCCTGGGATCGACCGACTCCACGCAAAATTATGAAAATCCATCTTTCAGCAGCGTGTCGGCTTGTGCTTCGCCTGAAACGACGATGGATAAACCTCGATCTTCCCAAAACGATAAGATTATTCATGTGACAATTGTGAGTTATTTTTCATCTATGGCTATTGTCAATCCTATTTTGCCCTCTGTGTCTGCGATTATGTATCCTGATGCCTCAGAAATAATGGCTACTGGAAGCTTAGAGATCGTGGAGCGGCCACTTTCGTCTATTATCGAAGAAATTGTTTATGTTGCGGTTGGAAAACAAGTGAAAGAGAGCAAGCTCACTTTGATTTATGCTCTGCAAAACTCAGGTGGGAAGAAGATCTGCATCATTCATGTCCATGAGCCTGCCCATATGATACCCTTATTGGGAACAAAGTTTCCAGCAAACTCATTAAAGGACCAGGAAGTGAGAGCCTACCGAGAAATTGAGAGACAGAGCATGCATAAGGTCCTCGATGAGTATCTTCTTCTCTGCCGTCGCACTGGGGCTCGGGCAGAGAAACAATATACTGAATCTGATAGCATTGAGAAGGGAATTGTTGAACTCATTTCTCGGTGTGGCATTCGAAAACTTGTGATGGGAGCTGCCTCAGATAAACACTATTCAAGGAAAATGGTGGATATTAAATCCAAGAAAGCCATTTATATTCGCATGCAAGCTCCAGATTTTTGTCACATCCAATTTATTTGCAAAGGAAACCTTATTCACACCAGGGAAGGTAATCAACATGGAGCACGTGCACAAGTTGTATCTCCTCCATCAGTTGCACCAGCTCTATCTCCATCTGTACCACCGAGCCTGATCCCCCGAGCCTTCCTACCCAGCCACTGGAGATCATTATCCCTCTCCGTTGCACCTATCAATGGAATGAAAAATGGTGATCATCCAAGAGCAAAATCCGTGCATGGCGATTATTCAGGGGCGAACATGATTCATCCTGGTTCTCCAGTTATTGACATTCTTCAAAGTCCAATGGGGTCTCCTCATGGGGCTTTGGAAGATTATGATCGATTATTTCGGAGAAGCCCTTCCGAGCTTTCAGTTTTTTCATTAGCTTCTTGTAGTGGAGAAAATGATATCGTTTCATATACCTCGGAACTTGCTATAGATGAGTCTCATCGATCATCCCCTCCCAGTGATGGATGCACAAATGAAAATCTTTATGAACAACTTAAACGGACGATTACAGAAGCCACAAATGCCAAGCGAGAAGCTTTTGATGAGTCCCTAAGACGTGGAAATGCTGAAAAAGATGCCATTGATGCTATACGCAAGGTTCATAACACTGGTATCAGAGCAATTGTCGGAAGGAAGGGAGACGGAGGGGACGTCGCCGGAGATGACAAAGTCAGGCAAGTCCGAGAAGAGGTTGGCCATGTGCGAGTGGAGGTGGGTTCGCTATGTGAGGAGCTCTCTCTCGAAGTCGGGACGCTGAAGGCGGACATGAAGTCGACTTTGGAGCAGAGCATCGCTCACGAAGTTGAGGTATTGATGGCTGACTTCGCGTGTATTCTGGAGAAACTTGCGGTCTTGACCGTGACACAGAACTCCCTTATGGGTAAGGAGAATGTGAGGATTCCTAGTACGAGTGAGCAGAAAATGATGGAGGAGTTTGAAGAGGATGAAGGGTTCCAGAGCTACCGCCATGAGTTTGCGGCTAAGTTTGGAGAGGTGGGTGAGAACATTGGCCTTAGTAGTCTGGAACGACTATCTGGCAGCTCTGTGACAGTGTCAAATTTTTGGCCTCCGATCACTGAAATGGCAGGAAATTTTACCTGCGACCATTGGGTGAGAAATTTGGACGTGTGTTTGAAGGCGGCAATGTGTGTTTCGGGTCGAACTATTTTTTGCTTTGCACCTTTGACGGTGAGGCACTCGCTTAGTATCAATGGGAGGATAATTATCAAAATTTTCATAATTGGGATACTGATAGAACATGAGAAACTGGTCATAAGAAAAGAAAAGAAGAACGCAGAGGCTATCGGGAAAAGAAGACTACTTTCGGGTGTGGGCGAACAAGAAAAGGCAATTGTTGAAAGTTCCGATAATTGGGTTATACAAGAAACTGTTGTTTTTCAAAAACCAGACCTTGATCGGACCTGGAACGATCAAGAAACGAACATAAAGGAATTCCATGCCATGACGAAACAACTCGAAAAATTGGAATCGCTTTCCGACTTGTTGCAGAAAGCAACAGAAGAAGCAGAGAAAAAAACAAACTTGCAGGCTAGAGTTGCAGAAAGCTTATATGCTGTGGAGTTGAAACAAAAAAATGAACTTGAAAATGCACTAGCAGACGAGAAGGAAAAACTCAATGACATGAAGAATAAATGTGAAAAAGTAATGGAAGAACTCAAAATTTCTCAACTGCAAAGGTCAAATCTTGAGAACCAAATTGCAGAATCTGATCAGACGTCTAAGGAGTTGGAACAAAAAATTATTTCTGCTGTTGACCTGTTACAAAATTACAAAATCGAAAGAGATGAGTTACAGAGGCTGCGGGACAGTTCTCTAAGAGAAGCACAAGAGCTTAGGAGAGCACTTGGAGAGAACTCGAGCACACACATGCCTCAGTTCTTTTCTGAGTTCTCATTTTCAGAAATTGAGGAGGCGACTAGATATTTTGATCCGCCCTTGAAGATTGGAGAAGGAGGATATGGAAGTATATATAGGGGGTTTCTGCGTCACACTGAAGTGGCTATTAAAATGCTGAACTCTCATAGCTTGCAGGGTCCCTCTGAATTCCAGCAGGAGGTGGATGTATTGAGTAAGATGAGACATCCAAATCTTGTCACGCTCATTGGAGCTTGCCCAGAATCCTGCATACTAGTCTATGAATATCTTCCAAACGGAAGCCTTGAAGATAGGCTGAGCTGCAAGGATAATAGTCCGCCATTATCATGGAAATGTCGAATTCGCATTGCCACAGAGTTGTGCTCGGCCATCATGTTTCTTCACTCGGGTAAACCCCACAGCATAATTCATGGTGATTTGAAACCTGCGAATGTATTACTTGATTCCAATTATGGCTGCAAACTTGGAGACTTTGGAATCTGTCGCCTTGTTACACATAACAATGGGTCAAGCAACAATGTGACTCATATTTGCCAAACTGACCCTAAGGGAACTTTTGCATACATGGATCCAGAGTTTGTTTCAACAGGGGAGCTTACTGTAAAATCCGATGTGTATTCATTTGGAATCATATTACTACGGCTACTTACGGGAAGATCAGCCTTGAGGATAGCAAAGGAAGTTCAATATGCATTGGAGAATGGAAATTTGAAAACTCTTTTAGATCCTTTAGCCGGAGACTGGCCATTTGTACAGGCCGAGCAGTTGGCTCATATGGCACTTAGATGTTGTGATGTAAATCGTCGAAGCAGACCAGACCTTGTGGTGGATGTTTGGAGAGTACTTGAACCTATGAAAGCCTCTTGCGGCAGCTCTTTATCATTTAGTTTGGGTTCTGATGAGCATTTTCAACCTCCTGGCTATTTTATTTGTCCCATCTTTCAGGAAGTTATGCAGGATCCACAAGTGGCTGCGGATGGTTTTACATACGAAGCAGAGGCTTTGAAAGGATGGTTGGAGAGCGGGCATGACACTTCGCCGATGACAAACCTTAAACTCGAAAACTCCACTCTCATTCCCAATCGCGCTCTGAGATCTGCAATTCAAGAGTGGCTACAAAACCGATAA 3825 43.84 MLTDWEKWQWRRRILAMWGNLATANPSILGSTDSTQNYENPSFSSVSACASPETTMDKPRSSQNDKIIHVTIVSYFSSMAIVNPILPSVSAIMYPDASEIMATGSLEIVERPLSSIIEEIVYVAVGKQVKESKLTLIYALQNSGGKKICIIHVHEPAHMIPLLGTKFPANSLKDQEVRAYREIERQSMHKVLDEYLLLCRRTGARAEKQYTESDSIEKGIVELISRCGIRKLVMGAASDKHYSRKMVDIKSKKAIYIRMQAPDFCHIQFICKGNLIHTREGNQHGARAQVVSPPSVAPALSPSVPPSLIPRAFLPSHWRSLSLSVAPINGMKNGDHPRAKSVHGDYSGANMIHPGSPVIDILQSPMGSPHGALEDYDRLFRRSPSELSVFSLASCSGENDIVSYTSELAIDESHRSSPPSDGCTNENLYEQLKRTITEATNAKREAFDESLRRGNAEKDAIDAIRKVHNTGIRAIVGRKGDGGDVAGDDKVRQVREEVGHVRVEVGSLCEELSLEVGTLKADMKSTLEQSIAHEVEVLMADFACILEKLAVLTVTQNSLMGKENVRIPSTSEQKMMEEFEEDEGFQSYRHEFAAKFGEVGENIGLSSLERLSGSSVTVSNFWPPITEMAGNFTCDHWVRNLDVCLKAAMCVSGRTIFCFAPLTVRHSLSINGRIIIKIFIIGILIEHEKLVIRKEKKNAEAIGKRRLLSGVGEQEKAIVESSDNWVIQETVVFQKPDLDRTWNDQETNIKEFHAMTKQLEKLESLSDLLQKATEEAEKKTNLQARVAESLYAVELKQKNELENALADEKEKLNDMKNKCEKVMEELKISQLQRSNLENQIAESDQTSKELEQKIISAVDLLQNYKIERDELQRLRDSSLREAQELRRALGENSSTHMPQFFSEFSFSEIEEATRYFDPPLKIGEGGYGSIYRGFLRHTEVAIKMLNSHSLQGPSEFQQEVDVLSKMRHPNLVTLIGACPESCILVYEYLPNGSLEDRLSCKDNSPPLSWKCRIRIATELCSAIMFLHSGKPHSIIHGDLKPANVLLDSNYGCKLGDFGICRLVTHNNGSSNNVTHICQTDPKGTFAYMDPEFVSTGELTVKSDVYSFGIILLRLLTGRSALRIAKEVQYALENGNLKTLLDPLAGDWPFVQAEQLAHMALRCCDVNRRSRPDLVVDVWRVLEPMKASCGSSLSFSLGSDEHFQPPGYFICPIFQEVMQDPQVAADGFTYEAEALKGWLESGHDTSPMTNLKLENSTLIPNRALRSAIQEWLQNR 1274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 24005808 24018551 + BLOR07829 Blo16g00581 71772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00581 1274 SUPERFAMILY RING/U-box 1198 1272 - -
Blo16g00581 1274 PANTHER OS02G0152300 PROTEIN 715 1270 - -
Blo16g00581 1274 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 33 715 1270 - -
Blo16g00581 1274 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 33 116 487 - -
Blo16g00581 1274 SMART Ubox_2 1207 1270 IPR003613 GO:0004842|GO:0016567
Blo16g00581 1274 Coils Coil 755 785 - -
Blo16g00581 1274 PANTHER OS02G0152300 PROTEIN 116 487 - -
Blo16g00581 1274 Coils Coil 791 888 - -
Blo16g00581 1274 SUPERFAMILY Protein kinase-like (PK-like) 892 1173 IPR011009 -
Blo16g00581 1274 CDD RING-Ubox_WDSUB1_like 1208 1249 - -
Blo16g00581 1274 SMART serkin_6 916 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00581 1274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1034 1046 IPR008271 GO:0004672|GO:0006468
Blo16g00581 1274 Pfam U-box domain 1205 1273 IPR003613 GO:0004842|GO:0016567
Blo16g00581 1274 Gene3D Transferase(Phosphotransferase) domain 1 989 1192 - -
Blo16g00581 1274 ProSitePatterns Protein kinases ATP-binding region signature. 922 943 IPR017441 GO:0005524
Blo16g00581 1274 Coils Coil 425 449 - -
Blo16g00581 1274 Gene3D Phosphorylase Kinase; domain 1 901 988 - -
Blo16g00581 1274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1203 1274 IPR013083 -
Blo16g00581 1274 Pfam Protein kinase domain 921 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00581 1274 CDD STK_N 120 273 - -
Blo16g00581 1274 ProSiteProfiles Protein kinase domain profile. 916 1185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00581 1274 ProSiteProfiles U-box domain profile. 1203 1274 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00396 Blo-Chr7:6875537 Blo16g00581 Blo-Chr16:24005808 1.81E-26 dispersed
Blo10g00478 Blo-Chr10:10187070 Blo16g00581 Blo-Chr16:24005808 2.09E-40 dispersed
Blo13g01077 Blo-Chr13:32924627 Blo16g00581 Blo-Chr16:24005808 9.78E-26 dispersed
Blo16g00581 Blo-Chr16:24005808 Blo17g00048 Blo-Chr17:307230 1.22E-86 dispersed
Blo16g00581 Blo-Chr16:24005808 Blo16g00977 Blo-Chr16:38034996 9.14E-99 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84755 PF00069 Pkinase 2.90E-40 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00581 - - mnt:21395628 748.814