Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00585 ATGGCTGGAATTAAGTTATCTATGTTGAAGAGGCCACTGTGTGATTGGAAGCCACATTCCTTTCAATGTTTCGACTATATTGAATGTGGAAATTATGCCCATCGTCTTCCTGTAACAGTCAGATCATCGTTTGCTCTTCTAAATCACAAGTTTCACTCAACTCTGAAATCTGAAAATATTGCCAATACCCATTCCGGAACAGCATGTATAGAACCTCTGGCTGCCAAAAACTATTATAAAACCAAACCCTTGACTGCATTTTCACTTATGTCTTCAAATTCACAATTACGAAATACTGTTCCTCTTTCTATGTCAAACCCTCTATATAATTATCGATCATATTCATCATCATCTGGTAATAAAGTGGGCGACTACAGAGATGTGGGAGTTAAGGCAGCATCTGGGACTGATGAAGGGGATGTTAATACCACAAGCATTCTTGGAGGTGATTGGCATGAAAAAGTTAAGGATGCTTATCAAAGTGCTGTAGAGGCTGTATCATTTTCTGGGCAGAGGGCAAAAGAAGTATCTGATGAATGGACACCTTATGTTGATCAATTGCTAGACACACATCCATATCTCAAAAATGTGATTGTTCCGGTGAGTTGTACATTGACTGCCTCTGTTTTGGCATGGGTGGTGATGCCTAAGGTGTTGAGAAGATTTCACAAGTATGCATCATCAGGTCCGGCTGCTCTTCTCTCTGGCAGTCTCTTAGGAGAACCAATTCCTTACGAGAAGACCTTTTGGGGTGCGTTGGAGGACCCCGTTCGATACCTTACGACCTTCATTGCATTTACACAAATTGGCATGATTGTAGCACCAACAACTATAGCCTCGGAATATGTTATACAGGCCAGCAGGGGAGCAGTTATTGTATCCTTGGTTTGGTTTTTGTATCGATGGAAAACAAACGTGCTAACCCGTGCATTGACTGCCAAGAATATGGCAGGGTTTGCTCGGGATAGGGATAAGTTACTGGCTCTGGATAAAATTTCATCTGTTGGACTATTTGTACTTGGGTTAATGGCTTTCGCTGAAGCTTGTGGTGTGGCTGTTCAGTCTATTCTTACTGTTGGTGGTATTGGAGGAGTCGCTACTGCTTTCGCTGCAAAGGACGTCCTTGGAAATGTCCTTAGTGGTTTAGCCATGCAATTTTCCAAGCCCTTCTCAATTGGAGACACAATAAAGGCTGGATCGATAGAAGGTCAGGTGGTTGAGATGGGACTAACGACGACATCATTGCTTAGTGCTGAGAAATTTCCCGTTATAGTTCCAAATTCGCTGTTCTCTAGCCAGAAAATGATCCATCTAACTAACATAAAATCTCACAAAAAAATGTTGCTTAGATTGTTTTTGTCATTTGAGGTTGGAAGCTTCTTTTTTAGCTCATCACTGATGGTTATAACGAACAAGTCACGAGCTCAATGGCGTGCGATGACCACTAAAATCCCTCTGCAAGTTGATGATTTCAGTAAGATTGCTCAAATAGGAGAAGACATCAAGAGTATGCTAAGATCAAACCCAAATGTGTTTTTGGAGAAGGAAGCTCCTTATTGCTTTCTCTCCCGCATTGAAAGTTCATTTTCCGAGCTAACTCTAGGCTACAACCTCAAACATATGAAAAAAGACGAACTATACTCGGCGGAACAAGAGATTCTCCTCCAATCCGTGCAAATCATCAAAGAACATGGCGTTGCATTGGGCAGCACAGCCGCGAGTTAA 1725 41.86 MAGIKLSMLKRPLCDWKPHSFQCFDYIECGNYAHRLPVTVRSSFALLNHKFHSTLKSENIANTHSGTACIEPLAAKNYYKTKPLTAFSLMSSNSQLRNTVPLSMSNPLYNYRSYSSSSGNKVGDYRDVGVKAASGTDEGDVNTTSILGGDWHEKVKDAYQSAVEAVSFSGQRAKEVSDEWTPYVDQLLDTHPYLKNVIVPVSCTLTASVLAWVVMPKVLRRFHKYASSGPAALLSGSLLGEPIPYEKTFWGALEDPVRYLTTFIAFTQIGMIVAPTTIASEYVIQASRGAVIVSLVWFLYRWKTNVLTRALTAKNMAGFARDRDKLLALDKISSVGLFVLGLMAFAEACGVAVQSILTVGGIGGVATAFAAKDVLGNVLSGLAMQFSKPFSIGDTIKAGSIEGQVVEMGLTTTSLLSAEKFPVIVPNSLFSSQKMIHLTNIKSHKKMLLRLFLSFEVGSFFFSSSLMVITNKSRAQWRAMTTKIPLQVDDFSKIAQIGEDIKSMLRSNPNVFLEKEAPYCFLSRIESSFSELTLGYNLKHMKKDELYSAEQEILLQSVQIIKEHGVALGSTAAS 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 24086860 24090224 + BLOR07833 Blo16g00585 71776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00585 574 Pfam Mechanosensitive ion channel 331 440 IPR006685 GO:0016020|GO:0055085
Blo16g00585 574 Gene3D - 389 437 IPR023408 -
Blo16g00585 574 SUPERFAMILY Sm-like ribonucleoproteins 373 437 IPR010920 -
Blo16g00585 574 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL-RELATED 98 572 - -
Blo16g00585 574 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 289 372 IPR011014 GO:0016020
Blo16g00585 574 Gene3D - 282 388 - -
Blo16g00585 574 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 98 572 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00332 Blo16g00585 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00585 Blo-Chr16:24086860 Blo18g00106 Blo-Chr18:991140 8.64E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00585 K22047 - vvi:100261915 621.698