Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00598 ATGTCAAGGGTTGCTGTCTCACAGTGTCAAGGCAATGATTCTTTAGCATTTATTGGTGGAAATGGTAGAAATGCGGAGTTCATGGATGACCGTGATGATGCTTTAGAATCAAGGTGCACTGATGATGATCAGCCCTTAGGTTTGAGGGAAGTTGATGAAAAAGATGAAGAGAGAGAAAAAGATGAGCCCAGTGTGGATGAATTGAGAGAATCGCTTCAAACTGTCATAATGGAACTGGAAGTTGCTAGGATCAATAGCACCATGTTTGAGGAAAAGGCCCAGAAGATATCAGAAGCAGCGATAGCCTTGCAAGATGAAGCTGCCAACGCTTGGAATGACATTAATTCTACCCTTGACATTATTCAACAAATTGTGAATGAAGAATGTATCGCCAAAGAGTCAGTTCAGAAAGCAACAATGGCTCTTTCCCTAGCTGAGGCAAGGCTTCAGGTTTCAATCGAATCTTTAGAGATTGCAAAAGGTGGAGATGATTCTCCAGAAATGTCAGGAGATAGTGATGGGGAATACGATGTTAAGGATGCAGAAAAAGTTGTGTTAATGGTTCAAGAGGACATAAAGGAGTGCCAACAGGATTTGGCAAATTGTGAGGCAGAACTGAAGCGCATACGGAGTAAAAAGGAGGAACTTCAGAAAGAAGTGGACAGGCTCAATGAGGTTGCAGAAAAAACACAACTGAATGCTTTGAAGGCTGAGGAGGATGTGACAAACATAATGCATTTAGCTGAGCAAGCTGTTGCTCTGGAACTTGAGGCTGCACAGAGGGTCAATGATGCTGAGATTGCTTTACAGAAAGCAGAGAAATCTTTTGCTAATACTTCTATCGATCCTTCTGAAACTATGCAAGGGAAGGAGTTCAGTGATGAGGTTGCTGTTGAGGAGGAGAGACTGCTTCAAGCAATGTCTGTTGATTTCACAGTTGAAAGTGACAGAAATGTTTCAACAGACGGTAATTCTTTTGATATCAAGCCTTTACTGGATAGCTTTTCTGATTCTGAAGACCTCAACAAATCTAATGACTTTAGTGACCATGAGAATGGAAAGTTAAGTTTTGACTCCCCCAAGGAGGGTGACATCGAACTGGATAAGTCAAAGGTTGTGGGTCAAACAAAAAAACAGGAAATGCAGAAGGACTTGGTCAGGGAAACTTCACCCTTAAATGCTCCCAAGGCATTATTGAACAAATCTTCTCGTTTTTTTTCTGCATCATTCTTTTCTTTTACTGATGACGGGACTGAGTTCACACCAACAGCAGTTTTCCAGAGTCTTATGGAGTTTTCAAGGAAGCATTTGCCCAAAATAGTTGTTGGATTACTACTATTAGGAGGGGCAACCTTTGTTGCTACTCGTGCCGAGAGGAGTCCTCAGCTATTGCAACAAGAAGATATTGTCACCTCTAGCAGTGAAGAAGTTTCCTCAAAACCGCTTGTTCATCAACTCAGAATTCTTCCAAAGAAAGTTAAAAAATTAATAGCAATGCTTCCGCAGCAAGAGGTGAATGAAGAAGAAGCTTCCCTTTTTGACATGCTGTGGCTACTGCTTGCTAGTGTAATATTTGTGCCTCTATTTCAGAAGATTCCTGGAGGCAGCCCTGTTCTTGGTTACTTAGCTGCTGGAATCTTGATCGGGCCTTATGGTCTTTCCATAATTCGTCATGTGCATGGAACAAAAGCAATTGCTGAATTTGGAGTTGTATTTCTACTGTTCAACATTGGCCTTGAGCTATCAGTGGAAAGGTTGAGTTCCATGAAGAAATATGTTTTTGGGTTGGGCTCTGCTCAGGTTTTGGTTACGGCTGTGGTGGTTGGCTTGGTTGCTCATTTCCTTTGTGGGCAGCTTGGTCCTGCTGCAATTGTCATCGGAAATGGTCTAGCTTTATCATCCACTGCTGTTGTTCTGCAGGTGTTGCAGGAACGAGGTGAGAGCACATCACGGCATGGACGGGCTACATTTTCTGTCCTATTGTTCCAGGATTTGGCCGTTGTTGTATTGCTGATACTCATACCTCTTATTTCACCGAATTCATCAAAAGGAGGGGTAGGTTTTCAAGCCATTGCTGAAGCTCTTGGAATGGCTGCTGTTAAGGCAGTAGTTGCCATTTCTGCCATTATAGCTGGTGGGCGCTTGCTACTGCGGCCTATTTATAAGCAAATAGCAGAAAACCAAAATGCAGAAATATTCTCTGCAAATACACTCCTTGTTATTTTAGGAACAAGTTTACTAACAGCAAGGGCTGGACTATCCATGGCATTGGGTGCATTTCTAGCTGGTTTACTTCTTGCAGAAACAGAATTTTCTTTGCAAGTTGAATCTGATATTGCTCCTTATCGTGGTCTTTTGTTGGGTCTTTTCTTCATGACGGTTGGAATGTCTATTGATCCAAAGCTTCTTATTTCAAATTTTCCAATTGTTGCGGGGTCATTGGGGCTCCTAATCGGTGGCAAGACCTTATTAGTTGTGTTAGTTGGTAGGCTTTTTGGTATCTCAATCATATCTGCAATACGAGTTGGTCTACTTCTTGCTCCAGGGGGAGAGTTTGCTTTTGTTGCTTTTGGGGAAGCTGTTAATCAGGGTATAATGTCTTCTCAGTTGTCCTCGTTGCTATTTCTTGTGGTTGGGATTTCTATGGCCCTCACCCCATGGCTAGCTGCTGGAGGCCAATTGATTGCTTCTCGATTTGAACTGCATGATGTTCGGAGTTTGTTACCTGATGAGAGAGAGACAGATGATTTGCAAGATCATATTATCCTTTGTGGTTTTGGACGAGTTGGCCAGATAATTGCACAGCTTCTTTCAGAGCGGCTTATTCCTTTTGTTGCTCTTGATGTGAGGAGTGACAGAGTGGCGGTTGGACGTGCACTTGACCTTCCTGTGTATTTTGGTGATGCTGGTAGTAGAGAGGTTCTTCATAAAATTGGTGCTGAAAGAGCATGCGCAGCTGCAATAACTCTGGATTCACCTGGTGCAAATTATAGAACTGTTTGGGCGCTTAGCAAGTATTTTCCAAATGTCAAGACTTTTGTTCGTGCTCATGATGTTGATCATGGGCTTAATTTAGAAAAGGCTGGTGCAACAGCGGTTGTCCCAGAAACTTTGGAACCAAGTCTACAGCTCGCAGCTGCAGTTCTTGCCCAGGCTAAACTACCCACATCAGAGATTGCAGCTACAATCAACGAATTCAGGTCTCGTCATTTGTCAGAGCTCAGTGAGTTATGTGAAGCCAGTGGAAGTTCTCTTGGATATGGGTTTTCAAGAATGATGAGTAAATCAAAACCTCAATCCCCAGATTCTTCAGAAGAGAACCAAATTATTGAAGGAACTTTGGCAATATGA 3351 42.61 MSRVAVSQCQGNDSLAFIGGNGRNAEFMDDRDDALESRCTDDDQPLGLREVDEKDEEREKDEPSVDELRESLQTVIMELEVARINSTMFEEKAQKISEAAIALQDEAANAWNDINSTLDIIQQIVNEECIAKESVQKATMALSLAEARLQVSIESLEIAKGGDDSPEMSGDSDGEYDVKDAEKVVLMVQEDIKECQQDLANCEAELKRIRSKKEELQKEVDRLNEVAEKTQLNALKAEEDVTNIMHLAEQAVALELEAAQRVNDAEIALQKAEKSFANTSIDPSETMQGKEFSDEVAVEEERLLQAMSVDFTVESDRNVSTDGNSFDIKPLLDSFSDSEDLNKSNDFSDHENGKLSFDSPKEGDIELDKSKVVGQTKKQEMQKDLVRETSPLNAPKALLNKSSRFFSASFFSFTDDGTEFTPTAVFQSLMEFSRKHLPKIVVGLLLLGGATFVATRAERSPQLLQQEDIVTSSSEEVSSKPLVHQLRILPKKVKKLIAMLPQQEVNEEEASLFDMLWLLLASVIFVPLFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHFLCGQLGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGMAAVKAVVAISAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLISNFPIVAGSLGLLIGGKTLLVVLVGRLFGISIISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAAGGQLIASRFELHDVRSLLPDERETDDLQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAITLDSPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLSELSELCEASGSSLGYGFSRMMSKSKPQSPDSSEENQIIEGTLAI 1116
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 24430924 24441170 + BLOR07846 Blo16g00598 71789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00598 1116 Coils Coil 65 85 - -
Blo16g00598 1116 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 4 1116 - -
Blo16g00598 1116 Gene3D - 508 894 IPR038770 -
Blo16g00598 1116 MobiDBLite consensus disorder prediction 31 66 - -
Blo16g00598 1116 Coils Coil 178 240 - -
Blo16g00598 1116 Gene3D - 916 1080 - -
Blo16g00598 1116 Pfam Sodium/hydrogen exchanger family 518 888 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Blo16g00598 1116 ProSiteProfiles RCK N-terminal domain profile. 920 1042 IPR003148 GO:0006813
Blo16g00598 1116 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 519 799 IPR004771 GO:0006812|GO:0008324|GO:0016021
Blo16g00598 1116 Pfam TrkA-N domain 921 1034 IPR003148 GO:0006813
Blo16g00598 1116 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 4 1116 - -
Blo16g00598 1116 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 917 1058 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00894 Blo-Chr1:17964690 Blo16g00598 Blo-Chr16:24430924 6.56E-86 dispersed
Blo16g00598 Blo-Chr16:24430924 Blo17g00290 Blo-Chr17:3059252 3.86E-19 dispersed
Blo16g00598 Blo-Chr16:24430924 Blo18g00286 Blo-Chr18:3002232 2.62E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00598 - - jre:109012107 1615.13