Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00613 ATGGTGGCCATGCGAGCTTTCCTATCTGTTTTGCTTTTCTATTGTCTTCTTCTCTCTCCCTCCGCTTTTGGGTACTCCAAAAAAGAAATTATCAGCTGGTGCAGTCAAACCCCATACCCAAAACCTTGCGAGTATTTCTTAGACCAAAACCCTTCTTCCACGCCCATCAAAAGCAAGTCTGATTTTCTCAAAATCGCCTTGAAACTAGCTCTGGACCGAGCTTTGAACGCAGAAAAATACACGATTTCGCTAGGCAAAAAGTGTAGAAACGAGAAAGAAAAGACAGCCTGGGCGGACTGTCTAGAGCTCTACGAATACACTGTTGCCAGGCTCAACAAAACCAGCGACCCAACAACCAAGTGTAGCAACGACGACTCGCAGACCTGGCTCAGTACAGCTCTGACCAACCTCGAGACCTGCCGGACTGGGTTCCAAGAGCTTGAAGTTACGGACTACATTTATCCGTTAATGTCTAACAACGTTTCGAACTTAATCTGCAACACTTTGGCTCTAAACAAGCCTCAGGACACCCCAGAACCCAAATACAAAGGCGGGTTCCCGACGTGGGTCAAGCCAAGTGACCGGAAACTGTTGCAGTCGTCTTCTCCTGCTGCGTCTGCAAATATAGTGGTGGCTCAAGATGGGTCTGGAAATTACAAGACGATTAACGACGCTGTAAAAGCTGCTTCTAAGCGATCGGGGAGTGGGAGGTACGTGATTTACGTGAAAGCAGGAACTTATAACGAGAACGTTGAGATTACATTGAAGAACATCATGTTGGTCGGAGATGGAATCGGGAAAACTATCGTCACCGGAAGTAAAAGCGTTGGCGGTGGTTCCACCACCTTCCGATCAGCCACTGTTGCTGTGGTTGGCGATGGATTTATCGGGCAAGGCATCACCTTTAGAAACACAGCCGGCGCAGCAAACCATCAAGCAGTGGCTCTCCGATCAGGGTCTGACCTCTCGGTGTTCTACAAGTGTAGTTTTGAAGGCTATCAAGACACCCTTTACGTCCACTCTGAGCGACAATTCTACCGAGAATGTGACATCTATGGCACCGTCGATTTCATCTTCGGCAATGCTGCAGTTGTGTTCCAAAATTGTAATATTTTCGCCCGTAGACCTCCAAACAAAACCAACACTGTCACTGCACAAGGCCGAACCGATCCGAATCAAAACACTGGCATTTCGATTATCAATTCCCGAGTCACGGCCGCATCCGACTTGAAGCCGGTTGTTAGTTCAGTCAAGACATACCTAGGGCGACCTTGGAAGGAGTATTCCCGAACCGTTTTCATGAAGACGTACCTCGATAGCTTAATCCAACCCGCTGGATGGCTCGAATGGAGTGGTAATTTTGCGCTAAAGACATTGTACTACGGAGAGTATTTAAATACTGGTCCCGGATCTTCAACTGCTAATCGTGTTAAATGGCCAGGATATCGTGCCATCACAAGTTCGACAGAAGCATCAAAATTCACAGTACAAAATTTCATTGCGGGTAATTCTTGGCTCCCGGCCACTAATGTTCCGTTCACCTCTGGGCTCTAA 1554 47.55 MVAMRAFLSVLLFYCLLLSPSAFGYSKKEIISWCSQTPYPKPCEYFLDQNPSSTPIKSKSDFLKIALKLALDRALNAEKYTISLGKKCRNEKEKTAWADCLELYEYTVARLNKTSDPTTKCSNDDSQTWLSTALTNLETCRTGFQELEVTDYIYPLMSNNVSNLICNTLALNKPQDTPEPKYKGGFPTWVKPSDRKLLQSSSPAASANIVVAQDGSGNYKTINDAVKAASKRSGSGRYVIYVKAGTYNENVEITLKNIMLVGDGIGKTIVTGSKSVGGGSTTFRSATVAVVGDGFIGQGITFRNTAGAANHQAVALRSGSDLSVFYKCSFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVVFQNCNIFARRPPNKTNTVTAQGRTDPNQNTGISIINSRVTAASDLKPVVSSVKTYLGRPWKEYSRTVFMKTYLDSLIQPAGWLEWSGNFALKTLYYGEYLNTGPGSSTANRVKWPGYRAITSSTEASKFTVQNFIAGNSWLPATNVPFTSGL 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 24726464 24728616 - BLOR07861 Blo16g00613 71804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00613 517 CDD PMEI-like_3 32 173 - -
Blo16g00613 517 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 173 IPR035513 -
Blo16g00613 517 ProSitePatterns Pectinesterase signature 2. 351 360 IPR033131 -
Blo16g00613 517 SUPERFAMILY Pectin lyase-like 202 516 IPR011050 -
Blo16g00613 517 SMART PMEI_2 25 171 IPR006501 GO:0004857
Blo16g00613 517 Gene3D - 203 517 IPR012334 -
Blo16g00613 517 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 173 IPR006501 GO:0004857
Blo16g00613 517 Pfam Pectinesterase 208 503 IPR000070 GO:0030599|GO:0042545
Blo16g00613 517 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 174 IPR035513 -
Blo16g00613 517 ProSitePatterns Pectinesterase signature 1. 234 253 IPR018040 -
Blo16g00613 517 PANTHER PECTINESTERASE 6 516 - -
Blo16g00613 517 PANTHER PECTINESTERASE 6 516 - -
Blo16g00613 517 Pfam Plant invertase/pectin methylesterase inhibitor 30 171 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00276 Blo-Chr2:2669087 Blo16g00613 Blo-Chr16:24726464 1.74E-43 dispersed
Blo02g00277 Blo-Chr2:2673369 Blo16g00613 Blo-Chr16:24726464 1.64E-159 dispersed
Blo05g00293 Blo-Chr5:3296310 Blo16g00613 Blo-Chr16:24726464 1.72E-139 dispersed
Blo06g00502 Blo-Chr6:26918789 Blo16g00613 Blo-Chr16:24726464 1.28E-164 dispersed
Blo06g01006 Blo-Chr6:33299721 Blo16g00613 Blo-Chr16:24726464 0 dispersed
Blo07g00473 Blo-Chr7:10502942 Blo16g00613 Blo-Chr16:24726464 0 dispersed
Blo09g00029 Blo-Chr9:358877 Blo16g00613 Blo-Chr16:24726464 1.93E-147 dispersed
Blo10g00955 Blo-Chr10:28634906 Blo16g00613 Blo-Chr16:24726464 1.46E-146 dispersed
Blo10g00957 Blo-Chr10:28640646 Blo16g00613 Blo-Chr16:24726464 5.54E-83 dispersed
Blo16g00522 Blo-Chr16:21412622 Blo16g00613 Blo-Chr16:24726464 9.74E-100 dispersed
Blo16g00613 Blo-Chr16:24726464 Blo06g01091 Blo-Chr6:34203091 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00613 K01051 - vvi:100255703 830.091