Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00624 ATGACTCAATCGGCTGCCATGGCGTTGCAGCCTCAATCCATCACCCCCGTCGTCACTGCCACTAGTTCCGTGGCACCATCGCCGGACTATCGCAACCGTTCCATCTTTGAAGTTCCACCGACCTTTTTCGACTCTTGCACCATCATTCCTTCTCCACATTCTCTCACCTCCGCGACTATCCAGAGATCCTGTGACGATTCCTCCGCAGAAATACTCACGGCGTCGGAGAATTACGTTAAGGATTACGAAGTTTTTGGCTCTAGGCTAACGTGCAACACCTGCAAGTCGGATTTTGAATCTCTGCAGGACCAACGATTGCACTTTAAATCAGATATCCACCGTTTTAATGTGAAGCTAAATATATCTGGAAAAAATATTGTGAAGGAGGAAGAGTTTGATGAGATGACATTTGATTCTTTCAAAGATTATGATGTATCAAGTATATCAGGATCAGAAGATGAAATGGACAAGATTATTGGCCCTCGGAATGATGGGGGAAAGGATTCTAGTGAAAGTGTTAGGAAGAAGTTGTTTATTCGTCTTCAAACTGGGGAGAGGGTATCTATTTGGAAGTGTTTAATTATGAATGAATCTGAAAATATATCATATGAAGATAAAACATCTGCTACCAGTGATAATGACTTTTTTCCTTGTTTGAGAGCAAACGATGTTATAAGCAGATTGGAAAATTTGATTCATGAACCAAGGGATGGGACTCATCTGCGGATTATATTGCTTGCAAGTGGAGGACACTTTGCTGGATGTGTATTTAATGGAAACATGGTTGTTGCTCATAAAACATTTCACAGATATGTGGTGAGAGCAAAGGCTGGTAAGAAACAATCATCAAAAGATGGGACAGGCAGAGCTTTCAGTTCTGCTGGTGCATCACTTCGTCGTTATAATGAACTCGCATTGAAAAAGGATGTACAAGACCTGCTTACTTCATGGAAGCCGTATTTTGATGCTTCATCATGTATATTCATTTATGCTCCCTCAAACAATCGGCAATTGCTTTTTAGTGCAGAAAAACCTTATTTTAGTCATCAGAATTCTGTCGTTAGAAATGTTCCATTAACAGTTAGGAGGCCAACATTTAAAGAAAGCCGACGAGTCTATGAACAATTGATAAAAGTTTCTCATGAAGCAGATGAGGAGTCGGTGTCTAGTATTAATCACGAAACACTAACTTCTATTTCAACAAACAATTTCTGCGACAAAGTTGATAGGGTGGTAGCCCCAAACTTAGAGACAGAAGCTAACTTAGTTTGTAAAGAAACTGACAAAGATCACGTATCAAGTGAGAGCGAGAATGAAGTGATCAGTTCATCAACACCTTTACATGAAGCAGCGGTGGCTGGAAATGCACTTCAGGTTCTGGAACTTCTAGAACAGGGTCTAGATCCTTGCGTAAAAGATGAGAAGGGACGTACCCCTTACATGCTGGCAAATGATAAAGAGGTCAGAAATACTTTTAGAAGGTTTATGGGTTCAAATCTAGATAAGTGGGACTGGATTTCTGCTAAGGTACCAAGTGCACTGACTAAAGAAATGGAGGACTCTCAAGCGGCTAAGCAGGCTGAAAAGGATGCCAAGAGAAAGGCTAAAGCAAAGGAGCTGAAGAAACTGCGGAAAGCAAAAGAGAAGTTGAAAGCTCAGGTGCGTACTGCTTATTTTTGTTCGGAATTTCAGAAGAGTTTCCAGATTTTTCAGCTTAAATTCTGTAGATGTGCTGCTGTATCTCAAAATTCCGAAGCAGTCAATCATTCCTCTGTTGTGAAGGGAGAGGATCAAACAATTTCCAAAGAGGAGGAGTTAAAAAGGGCAACAGCAGAGGAGCGGGAAAAAAGAGCGGCAGCTGCTGAGAAGAGAATTGCTGCGCTAAATGCAGGTGAAGGCAAGACCACATCACCGGGTACTTCACAACCCAAAAATGGGGTGGCGGGGGAGATTAGATGTTCCTGTTGTGATGTATCATTGGCTGGTAAAGTACCTTTTCATCGCTATAATTTCAAATACTGCAGCTCCTCATGCATGCACAATTTTTTGGCACTATGCGCAAGTGGTTATTATGAAGGAACCATTTTTCATCGAAATATTAAAGGTTTTATGATACAAGGTGGAGACCCAACAGGCACTGGCAAAGGGGGGATGAGTATTTGGGGCAAAAAATTTAATGATGAGTTAAGAGAGTCACTCAAGCATAATGCACGAGGAATATTATCTATGGCCAACAGCGGACCCAACACCAATGGCAGCCAGTTTTTCATAACTTACGCAAAGCAACCACATCTGAATGGACTTTATACTATATTTGGTAGGGTGATTCACGGGTTTGAAGTCCTTGATATCATGGAAAAGCTATTTGTGTTGTTGCAGACTCCAACTGGACCAGGGGATCGACCTCTTGCTGAGATCAGGCTCAATCGGTTCGCACTTCTCAGAGTGCAGAAGACGCAGACCGCCCACTGCATAGGATTGGCAGCCGGAGATGGAGCTTCAGCTTATGGGGAAGAAGAAAAGGGAAAAAGCAGCGAAGATAGCGAACAGATGGACAGGAACTTCAAGCTCATGGGCATGAAGATTATTTTGGGTGGAAATATGGACCAGCACCGGACCGGCCGGTCCGGTGCTGTGTTTTTGAAGACCGGTACCGGTCCCATGGAGGTCCGGTGCCGGTGTCGGTGCGGACTGGATAGAACTGAATCGGGCATTTTGCCCTACTCACCGGAGTCAGGAGATGGAGGAGGACGTTCCTCGATTTTTCTCTACCGTCCAGACTGCGCTGCCTCTTTGGAACGATTCCCAGTTGCAGTCCTGTTGTCGTCCACGTTCAACAGCCCCTATGTTCGATCGCTCGCAGCCGCCAACGACCAAACGCTCGCTCGTCGTCTGCTTGGAATGCTCCCGAACAGAAGCTGTCAAAGCTTGGCGACTGGCGACGGACAGAGGTCGGAGCTCGCCGCTCGGAGCTGGCAGTGGCAGACGAACGGAGATCGGAACTCGGAGCTCGAAGCTGGCAGTGGCAGAAGAACGGAGATCGGAACTCGGAGCTCGGAGCTGGCAGTGGCTGCCAGCAAACAGAAGAAGATGGAGTACCAGAAAGAGGCGGCCATCATGAGAAGCAAATGGGTTCCAACCACGAGGCTCTGTGTTAGAATCCGGGCTTGTCCAGGACGTGTTGTCCATGGCCGCCCCTACTGCTTAGTTAGATTTATTTCCATTTATAGTAATTTCCTTGTATTTCTTTTATTTCCATTTTGGGCAAAGTGA 3273 45.0 MTQSAAMALQPQSITPVVTATSSVAPSPDYRNRSIFEVPPTFFDSCTIIPSPHSLTSATIQRSCDDSSAEILTASENYVKDYEVFGSRLTCNTCKSDFESLQDQRLHFKSDIHRFNVKLNISGKNIVKEEEFDEMTFDSFKDYDVSSISGSEDEMDKIIGPRNDGGKDSSESVRKKLFIRLQTGERVSIWKCLIMNESENISYEDKTSATSDNDFFPCLRANDVISRLENLIHEPRDGTHLRIILLASGGHFAGCVFNGNMVVAHKTFHRYVVRAKAGKKQSSKDGTGRAFSSAGASLRRYNELALKKDVQDLLTSWKPYFDASSCIFIYAPSNNRQLLFSAEKPYFSHQNSVVRNVPLTVRRPTFKESRRVYEQLIKVSHEADEESVSSINHETLTSISTNNFCDKVDRVVAPNLETEANLVCKETDKDHVSSESENEVISSSTPLHEAAVAGNALQVLELLEQGLDPCVKDEKGRTPYMLANDKEVRNTFRRFMGSNLDKWDWISAKVPSALTKEMEDSQAAKQAEKDAKRKAKAKELKKLRKAKEKLKAQVRTAYFCSEFQKSFQIFQLKFCRCAAVSQNSEAVNHSSVVKGEDQTISKEEELKRATAEEREKRAAAAEKRIAALNAGEGKTTSPGTSQPKNGVAGEIRCSCCDVSLAGKVPFHRYNFKYCSSSCMHNFLALCASGYYEGTIFHRNIKGFMIQGGDPTGTGKGGMSIWGKKFNDELRESLKHNARGILSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGRVIHGFEVLDIMEKLFVLLQTPTGPGDRPLAEIRLNRFALLRVQKTQTAHCIGLAAGDGASAYGEEEKGKSSEDSEQMDRNFKLMGMKIILGGNMDQHRTGRSGAVFLKTGTGPMEVRCRCRCGLDRTESGILPYSPESGDGGGRSSIFLYRPDCAASLERFPVAVLLSSTFNSPYVRSLAAANDQTLARRLLGMLPNRSCQSLATGDGQRSELAARSWQWQTNGDRNSELEAGSGRRTEIGTRSSELAVAASKQKKMEYQKEAAIMRSKWVPTTRLCVRIRACPGRVVHGRPYCLVRFISIYSNFLVFLLFPFWAK 1090
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 24949487 24960044 - BLOR07872 Blo16g00624 71815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00624 1090 ProSiteProfiles Ankyrin repeat profile. 442 474 IPR002110 GO:0005515
Blo16g00624 1090 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 27 681 - -
Blo16g00624 1090 Pfam Bacteroidetes VLRF1 release factor 243 381 IPR041175 -
Blo16g00624 1090 Gene3D - 673 823 IPR029000 -
Blo16g00624 1090 Coils Coil 602 631 - -
Blo16g00624 1090 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 661 813 IPR002130 GO:0000413|GO:0003755
Blo16g00624 1090 CDD Cyclophilin_PPIL3_like 674 810 - -
Blo16g00624 1090 Coils Coil 518 553 - -
Blo16g00624 1090 ProSitePatterns Zinc finger C2H2 type domain signature. 91 113 IPR013087 -
Blo16g00624 1090 SUPERFAMILY Cyclophilin-like 680 810 IPR029000 -
Blo16g00624 1090 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 696 708 IPR002130 GO:0000413|GO:0003755
Blo16g00624 1090 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 739 754 IPR002130 GO:0000413|GO:0003755
Blo16g00624 1090 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 754 766 IPR002130 GO:0000413|GO:0003755
Blo16g00624 1090 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 767 782 IPR002130 GO:0000413|GO:0003755
Blo16g00624 1090 Gene3D - 405 502 IPR036770 -
Blo16g00624 1090 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 680 792 IPR002130 GO:0000413|GO:0003755
Blo16g00624 1090 Pfam Vms1-associating treble clef domain 651 680 IPR041540 -
Blo16g00624 1090 SUPERFAMILY Ankyrin repeat 443 496 IPR036770 -
Blo16g00624 1090 ProSiteProfiles Ankyrin repeat region circular profile. 442 474 - -
Blo16g00624 1090 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 691 708 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00019 Blo-Chr6:381516 Blo16g00624 Blo-Chr16:24949487 8.09E-27 dispersed
Blo06g00020 Blo-Chr6:395409 Blo16g00624 Blo-Chr16:24949487 1.92E-40 dispersed
Blo09g00488 Blo-Chr9:16074021 Blo16g00624 Blo-Chr16:24949487 9.08E-34 dispersed
Blo16g00624 Blo-Chr16:24949487 Blo13g00569 Blo-Chr13:27805002 1.44E-30 dispersed
Blo16g00624 Blo-Chr16:24949487 Blo03g01057 Blo-Chr3:36941150 5.61E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00624 K26089 - csv:101216211 700.279