Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00629 ATGAGTTTTGGGGGTTTTCTTGATAATCCTCACGATTCTAGTGGCGGTGGCACAAGAATGGTCGCCGATATACCTTTCGCCGCCAGAAACGCCGAAACCGCCATTAATATGGCTTCAGCTACAATAGCTCAGCCTCGTCTTCTTTCTCAATCTCTCGCCAAATCCATTTTCAACTCTCCTGGCCTCTCTTTGGCTCTTACTGATATTGATGTGCAAGGAGACATGGCTGCTAGAATGGCTGAGAAGTTAGTTCGAAAACTTGGTAGAAGAAGCAGAGATGAAGAACACGAGAGCAAATCTGCCAGCGATAACGTAGACGGTGGTTCAGGAGATGATCTAGACGGTGCTGATAATCGGCCAAGGAAGAAGAGATATCACCGACACACTCCTCAGCAAATCCAAGAACTAGAAGCTCTGTTTAAGGAGAGTCCTCATCCTGATGAGAAACAAAGATTGGATCTTGGCCAAAGGCTTTGCTTGGAAACCCGACAAGTCAAATTCTGGTTTCAAAATCGTCGAACTCAGATGAAGACTCAACTGGAACGCCACGAAAATACATTATTGAGACAGGAAAATGATAAGCTAAGAGCAGAAAACATGTCAATACGCGACGCCATGAGAAATCCGATGTGCTCAAACTGTGGGGGCCCTGCGATTATCGGTGAAATCTCGCTCGAAGAGCAGCATCTGAGGATTGAAAATATGCGATTGAAGGACGAGTTAGACCGTGTTTGTGCGCTTGCGGGAAAGTTTTTGGGTCGCCCCATTTCATCGCTGGCGGCTTCAATTGCACCTCCATTGCCAAGCTCAAGCTTAGAGCTTGGAGTTGGGAATGAAATTGGGTATGGTGGTTTGAGCAGTGTGTCAACAACCATAGCTATGGGGCTGGATTTTGGCAGTGGGATTTCAAGTAATTTGCCAAATGTGCCTTCGACGAGAACATCGAGTTGTTTAACGGGGCTCGATGGGTCATTTGAGAGATCCATGTTCCTCGAGCTTGCTTTGGCTGCAATGGATGAACTAGTTAAGATGGCACAGACTGATGAGCCTCTCTGGATTAGAAGCTCGGAAGGTGGACGAGAATCGGCATTAAACCATGAAGAGTATGTTAGAGCTTTCAATCCTTGCATCGGATTAAAGCCGAACGGGTTTGTAACCGAAGCATCGAAGGACACTGGAATGGTCATAATCAACGGCTTGGCTCTTGTTGAGACATTGATGGACTCGGCTCAATGGGCTGAGATGTTTCCGTGTATGATCGCTAGAACAACAACAACTGATGTCATTTCGAGTGGTATGGGTGGAACAAGAAATGGTGCACTTCAATTGACATCTGTGACGATATTGTACTATTTTGTGAAGCTGGGGTGCTTAAGTTATGCAAATGTCCTTAATTTTCTCAAAACTTCTTACTCTCAAATCTTGATTCATTGTTCAATTCGTCCTTGCAAAGTTACGTGGGTGGAGCATGCAGATTACGATGAGAGCCTTGTCCATCAACTGTACCGCCCTCTTCTAAGCTCCGGCATGGCCTTCGGCGCTCAGCGGTGGTTGGCCACTCTCCAGCGGCAATGCGAGTGTCTCGCCATTCTCATCTCCTCCGCCAACCCCTCTCGCGATCATGCAGCAGCGATTACTGCTGGGGGCCGGAGAAGCATGCTGAAGCTGGCGCAGAGGATGACGGACAACTTTTGCGCAGGAGTATGCGCTTCGACGGTGCACAAGTGGAACAAACTCAATGCTGGGAATGTGGACGAGGATGTGCGGGTGATGACCCGGAAGAGCGTGGATGATCCGGGAGAGCCGCCGGGTGTTGTGCTCAGCGCCGCCACTTCCGTCTGGCTCCCCGTTTCTCCTCAAAGACTGTTTGACTTTTTACGCGATGAACGGCTGAGGAGCGAGTGGGATATTTTATCCAACGGTGGTCCCATGCAGGAGATGGCTCACATCGCCAAAGGCCAAGATCACAACAACTGCGTCTCTCTCCTCCGAGCCAGCGCTATGAACGCCAGCCAGAGTAGCATGCTGATCCTACAAGAAACTTGCATTGATGGGGCTGGGTCCCTTGTCGTGTACGCGCCAGTGGACATCCCAGCCATGCACGTGGTGATGAATGGCGGCGATTCGGCCTACGTGGCTTTACTCCCTTCCGGATTTGCGATAGTTCCGGATGGGCCAGATTCCCGCGGTGGATCTGCCAACGGCGGTAGCCCGAACGGCCGTGAGGGCCCACGTAGAGTCAGTGGGTCCCTCCTGACGGTGGCGTTCCAGATTCTTGTGAATAGCTTGCCTACTGACAAGCTCACTGTAGAATCGGTGGTGACAGTCAACAATTTAATCTCGTGCACAGTTCAGAAGATCAAGGCTGCTCTTCAATGCGAAAGCTGA 2388 49.92 MSFGGFLDNPHDSSGGGTRMVADIPFAARNAETAINMASATIAQPRLLSQSLAKSIFNSPGLSLALTDIDVQGDMAARMAEKLVRKLGRRSRDEEHESKSASDNVDGGSGDDLDGADNRPRKKRYHRHTPQQIQELEALFKESPHPDEKQRLDLGQRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGPAIIGEISLEEQHLRIENMRLKDELDRVCALAGKFLGRPISSLAASIAPPLPSSSLELGVGNEIGYGGLSSVSTTIAMGLDFGSGISSNLPNVPSTRTSSCLTGLDGSFERSMFLELALAAMDELVKMAQTDEPLWIRSSEGGRESALNHEEYVRAFNPCIGLKPNGFVTEASKDTGMVIINGLALVETLMDSAQWAEMFPCMIARTTTTDVISSGMGGTRNGALQLTSVTILYYFVKLGCLSYANVLNFLKTSYSQILIHCSIRPCKVTWVEHADYDESLVHQLYRPLLSSGMAFGAQRWLATLQRQCECLAILISSANPSRDHAAAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGVVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHNNCVSLLRASAMNASQSSMLILQETCIDGAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGGSANGGSPNGREGPRRVSGSLLTVAFQILVNSLPTDKLTVESVVTVNNLISCTVQKIKAALQCES 795
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 25131110 25135180 - BLOR07877 Blo16g00629 71820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00629 795 ProSiteProfiles START domain profile. 323 451 IPR002913 GO:0008289
Blo16g00629 795 Coils Coil 173 205 - -
Blo16g00629 795 Pfam Homeodomain 122 177 IPR001356 GO:0003677
Blo16g00629 795 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 63 446 - -
Blo16g00629 795 CDD START_ArGLABRA2_like 327 526 - -
Blo16g00629 795 Pfam START domain 472 527 IPR002913 GO:0008289
Blo16g00629 795 Pfam START domain 332 447 IPR002913 GO:0008289
Blo16g00629 795 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 483 792 IPR042160 -
Blo16g00629 795 ProSiteProfiles 'Homeobox' domain profile. 119 179 IPR001356 GO:0003677
Blo16g00629 795 SUPERFAMILY Bet v1-like 556 788 - -
Blo16g00629 795 SMART HOX_1 120 183 IPR001356 GO:0003677
Blo16g00629 795 MobiDBLite consensus disorder prediction 87 130 - -
Blo16g00629 795 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 483 792 - -
Blo16g00629 795 SMART START_1 332 527 IPR002913 GO:0008289
Blo16g00629 795 CDD homeodomain 121 179 IPR001356 GO:0003677
Blo16g00629 795 SUPERFAMILY Bet v1-like 326 527 - -
Blo16g00629 795 ProSiteProfiles START domain profile. 483 530 IPR002913 GO:0008289
Blo16g00629 795 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 63 446 IPR042160 -
Blo16g00629 795 MobiDBLite consensus disorder prediction 725 745 - -
Blo16g00629 795 Gene3D - 111 195 - -
Blo16g00629 795 SUPERFAMILY Homeodomain-like 106 179 IPR009057 -
Blo16g00629 795 MobiDBLite consensus disorder prediction 87 102 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00007 Blo-Chr1:139402 Blo16g00629 Blo-Chr16:25131110 0 dispersed
Blo07g00421 Blo-Chr7:7981329 Blo16g00629 Blo-Chr16:25131110 0 dispersed
Blo15g00501 Blo-Chr15:8462599 Blo16g00629 Blo-Chr16:25131110 0 dispersed
Blo16g00629 Blo-Chr16:25131110 Blo15g00036 Blo-Chr15:291196 0 dispersed
Blo16g00629 Blo-Chr16:25131110 Blo02g00373 Blo-Chr2:4133203 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13421 PF01852 START 1.50E-11 CL0209 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00629 K09338 - qsu:111991611 1168.3