Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00638 ATGGCTGGTTTAGATTTAAGCTCAGCTTCTCGCTTTATTTATCAACTCCAACAGCGCCCGGACCTTCATCTCCGACGACCTGCCACGGGCGACGATGTCTCCAATCCCAACCACTTCGCTGGAGCGGACGACGAGGAAGAAAATACCCACCAGGGCATTGACCTAATCACCTCCAACGCTGGACCCGGCGACATAGTAACTCGTCGGCCTAGAGGCCGACCACCGGGGTCCAAAAACAAGCCGAAACCTCCGGTGATCATAGCCAGAGAGAGCGCAAACACTTTGCGAGCTCATATACTAGAGGTCAGCTCCGGCTCTGACATGTTTGAAACGGTGGCGACTTATTCTCGGAAGCGTCAGAGAGGGATCTGTGTATTGAGCGGAAGTGGAACAGTGACTAACGTCAGCTTACGTCAACCCTCGTCGCCCGGAGCTGTCGTCACGCTACAAGGCCAGTTCGAGATACTGTCTTTAACCGGTTCGTTTTTGCCTCCACCGGCTCCTCCGGGCGCCACCAGTTTGACGATATTCTTGGCCAGCGGACAAGGTCAGGTAGTAGGAGGTAATGTGGTCGGTGCTCTGATTGCCGCAGGTCCGGTCATCGTTATCGCTTCGTCGTTCACAAATGTGGCTTACGAGAGATTACCGTTGGACGAAGAGGAGCCCATTCAGCAGCCTTCAGCCGACGACTCCGGAGCTGGTTCCGGCGGAAATAACCCTTTTCCGAACCCTCCTTCTGGTTTTCCGTTCTTTAATCTTCCGAACCAGAATCAGCTTCCGTCGGTTGACGAGTGGGGCGGAAATTCAGCAGGAAGACCCTCTTATTGA 828 54.23 MAGLDLSSASRFIYQLQQRPDLHLRRPATGDDVSNPNHFAGADDEEENTHQGIDLITSNAGPGDIVTRRPRGRPPGSKNKPKPPVIIARESANTLRAHILEVSSGSDMFETVATYSRKRQRGICVLSGSGTVTNVSLRQPSSPGAVVTLQGQFEILSLTGSFLPPPAPPGATSLTIFLASGQGQVVGGNVVGALIAAGPVIVIASSFTNVAYERLPLDEEEPIQQPSADDSGAGSGGNNPFPNPPSGFPFFNLPNQNQLPSVDEWGGNSAGRPSY 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 25541665 25542492 + BLOR07886 Blo16g00638 71829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00638 275 ProSiteProfiles PPC domain profile profile. 92 229 IPR005175 -
Blo16g00638 275 MobiDBLite consensus disorder prediction 23 84 - -
Blo16g00638 275 MobiDBLite consensus disorder prediction 221 275 - -
Blo16g00638 275 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 221 - -
Blo16g00638 275 Pfam Plants and Prokaryotes Conserved (PCC) domain 96 209 IPR005175 -
Blo16g00638 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 275 IPR014476 GO:0003680
Blo16g00638 275 MobiDBLite consensus disorder prediction 250 264 - -
Blo16g00638 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 275 - -
Blo16g00638 275 CDD DUF296 96 179 IPR005175 -
Blo16g00638 275 Gene3D - 95 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00836 Blo-Chr3:34084725 Blo16g00638 Blo-Chr16:25541665 3.52E-112 dispersed
Blo16g00638 Blo-Chr16:25541665 Blo19g00177 Blo-Chr19:7583163 1.06E-97 dispersed
Blo13g00459 Blo-Chr13:25073801 Blo16g00638 Blo-Chr16:25541665 1.44E-67 transposed
Blo16g00638 Blo-Chr16:25541665 Blo02g00265 Blo-Chr2:2557818 2.81E-137 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00638 - - nnu:104606472 356.295