Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo16g00681 | ATGGCGGGGGTCTCTTTGAAGTGCGGGGACTGTGGAGCCCTATTGAGGTCTATCCAAGAAGCTCAAGAGCACGCAGAGCTCACTTCTCACTCCAATTTCTCCGAATCTACCGAGGCAGTCCTCAATCTCGTTTGCACCACATGTGGAAAACCCTGCCGATCCAAAACTGAAACGGACTTGCACACAAAAAGAACTGGCCATGCTGAATTTGCTGATAAGACTTCAGAGGCTGCAAAACCAATAAGTTTGGAGGTTCCCAAGTTAGCTGAAGAAGCAGAGGAGGCTGCAGATGCTAGTACTAGTCAGCCTGAAGAAATGGTTGTGCCGGAGGTTGACAAAAAGTTGCTCGAAGAACTTGAAGCAATGGGGTTCTCAACAGCACGTGCCACGCGAGCCCTTCATTACTCTGGTAATTCTGGTGTTGATGCTGCTGTAAATTGGGTAGTTGAACATGAAGACGATCCTGAGATAGATCAGATGGTACCTTTGAACACTAAGGCTGAAGCTTCGAAACCTTCTCTTTCACCTGAAGAAATAAAAGCTAAACAACAAGAGCTAAGAGAACGAGCCCGCAAGAAAAAAGAAGAGGAAGCAAAGAAAAAAGAGAGAGAAAGGGAAAGGGAGAGAATCCGAGTGGGGAAGGAGCTTTTAGAGGCAAAAAGAATTGAAGAAGACAACGAACGGAAAAGGATAATGGCTTTGCGAAAAGCTGAAAAGGATGAAGAGAAACGAGCTCGAGATAAAATTCGTCAAAAATTAGAGGAGGACAAGGCTGAAAGAAGAAGGAAACTTGGATTGGCACCAGAAGATCCTTCTACTGTAAAACCTTCTGCACTTGTTGTTGAGGAGAAAAAGAGCATGTTGCCAGTTAGGCCTGCCACAAAGGCTGAGCAAATGCGAGAATGTTTGCGAACTCTTAAACAGCATCACAAGGCAAGTGCATTCAGACTAGTGAAGCGAGCATTCCAGACTCTTCTTACATACGTGGGGAATGTCGCCCGAAATCCTGGCGATGAAAAATTTAGAAAGATAAGACTCACAAACCAATCTTTCCAGGAAAGAGTTGGCGGATTGAAAGGAGGAGTTGAGTTTCTGGAGCTGTGCGGGTTCGAGAAAACCGAAGGAGATGAGTTCTTGTTTCTGCCAAGAGAGAAAGTGGATGTTGGGGTGTTGAACTCAGGTGGTTCAGAGCTGGACTCTGCCTTGAAGAATCCCTTTTTTGGGGTTCTTTAA | 1233 | 45.5 | MAGVSLKCGDCGALLRSIQEAQEHAELTSHSNFSESTEAVLNLVCTTCGKPCRSKTETDLHTKRTGHAEFADKTSEAAKPISLEVPKLAEEAEEAADASTSQPEEMVVPEVDKKLLEELEAMGFSTARATRALHYSGNSGVDAAVNWVVEHEDDPEIDQMVPLNTKAEASKPSLSPEEIKAKQQELRERARKKKEEEAKKKERERERERIRVGKELLEAKRIEEDNERKRIMALRKAEKDEEKRARDKIRQKLEEDKAERRRKLGLAPEDPSTVKPSALVVEEKKSMLPVRPATKAEQMRECLRTLKQHHKASAFRLVKRAFQTLLTYVGNVARNPGDEKFRKIRLTNQSFQERVGGLKGGVEFLELCGFEKTEGDEFLFLPREKVDVGVLNSGGSELDSALKNPFFGVL | 410 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 26431178 | 26436854 | - | BLOR07929 | Blo16g00681 | 71872 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo16g00681 | 410 | Pfam | PUB domain | 318 | 387 | IPR018997 | - | |
| Blo16g00681 | 410 | Gene3D | - | 112 | 157 | - | - | |
| Blo16g00681 | 410 | PANTHER | F13M7.16 PROTEIN | 1 | 410 | - | - | |
| Blo16g00681 | 410 | Pfam | UBA/TS-N domain | 116 | 147 | IPR015940 | - | |
| Blo16g00681 | 410 | SMART | uba_6 | 112 | 150 | IPR015940 | - | |
| Blo16g00681 | 410 | MobiDBLite | consensus disorder prediction | 236 | 268 | - | - | |
| Blo16g00681 | 410 | ProSiteProfiles | Ubiquitin-associated domain (UBA) profile. | 110 | 151 | IPR015940 | - | |
| Blo16g00681 | 410 | CDD | PUB_UBA_plant | 303 | 410 | - | - | |
| Blo16g00681 | 410 | Coils | Coil | 179 | 211 | - | - | |
| Blo16g00681 | 410 | MobiDBLite | consensus disorder prediction | 167 | 208 | - | - | |
| Blo16g00681 | 410 | Gene3D | - | 300 | 399 | - | - | |
| Blo16g00681 | 410 | MobiDBLite | consensus disorder prediction | 173 | 208 | - | - | |
| Blo16g00681 | 410 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 8 | 30 | IPR013087 | - | |
| Blo16g00681 | 410 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 45 | 67 | IPR013087 | - | |
| Blo16g00681 | 410 | SMART | PGNneu | 320 | 383 | - | - | |
| Blo16g00681 | 410 | SUPERFAMILY | UBA-like | 90 | 162 | IPR009060 | GO:0005515 | |
| Blo16g00681 | 410 | PANTHER | F13M7.16 PROTEIN | 1 | 410 | - | - | |
| Blo16g00681 | 410 | Coils | Coil | 235 | 259 | - | - | |
| Blo16g00681 | 410 | CDD | UBA_PUB_plant | 110 | 158 | - | - | |
| Blo16g00681 | 410 | SUPERFAMILY | PUG domain-like | 299 | 406 | IPR036339 | - | |
| Blo16g00681 | 410 | MobiDBLite | consensus disorder prediction | 236 | 274 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo16g00681 | Blo-Chr16:26431178 | Blo16g00788 | Blo-Chr16:33108228 | 2.21E-16 | dispersed | |
| Blo01g00769 | Blo-Chr1:10842028 | Blo16g00681 | Blo-Chr16:26431178 | 1.87E-07 | transposed | |
| Blo16g00681 | Blo-Chr16:26431178 | Blo02g00232 | Blo-Chr2:2224924 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo16g00681 | K24348 | - | jre:109003439 | 633.254 |