Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00681 ATGGCGGGGGTCTCTTTGAAGTGCGGGGACTGTGGAGCCCTATTGAGGTCTATCCAAGAAGCTCAAGAGCACGCAGAGCTCACTTCTCACTCCAATTTCTCCGAATCTACCGAGGCAGTCCTCAATCTCGTTTGCACCACATGTGGAAAACCCTGCCGATCCAAAACTGAAACGGACTTGCACACAAAAAGAACTGGCCATGCTGAATTTGCTGATAAGACTTCAGAGGCTGCAAAACCAATAAGTTTGGAGGTTCCCAAGTTAGCTGAAGAAGCAGAGGAGGCTGCAGATGCTAGTACTAGTCAGCCTGAAGAAATGGTTGTGCCGGAGGTTGACAAAAAGTTGCTCGAAGAACTTGAAGCAATGGGGTTCTCAACAGCACGTGCCACGCGAGCCCTTCATTACTCTGGTAATTCTGGTGTTGATGCTGCTGTAAATTGGGTAGTTGAACATGAAGACGATCCTGAGATAGATCAGATGGTACCTTTGAACACTAAGGCTGAAGCTTCGAAACCTTCTCTTTCACCTGAAGAAATAAAAGCTAAACAACAAGAGCTAAGAGAACGAGCCCGCAAGAAAAAAGAAGAGGAAGCAAAGAAAAAAGAGAGAGAAAGGGAAAGGGAGAGAATCCGAGTGGGGAAGGAGCTTTTAGAGGCAAAAAGAATTGAAGAAGACAACGAACGGAAAAGGATAATGGCTTTGCGAAAAGCTGAAAAGGATGAAGAGAAACGAGCTCGAGATAAAATTCGTCAAAAATTAGAGGAGGACAAGGCTGAAAGAAGAAGGAAACTTGGATTGGCACCAGAAGATCCTTCTACTGTAAAACCTTCTGCACTTGTTGTTGAGGAGAAAAAGAGCATGTTGCCAGTTAGGCCTGCCACAAAGGCTGAGCAAATGCGAGAATGTTTGCGAACTCTTAAACAGCATCACAAGGCAAGTGCATTCAGACTAGTGAAGCGAGCATTCCAGACTCTTCTTACATACGTGGGGAATGTCGCCCGAAATCCTGGCGATGAAAAATTTAGAAAGATAAGACTCACAAACCAATCTTTCCAGGAAAGAGTTGGCGGATTGAAAGGAGGAGTTGAGTTTCTGGAGCTGTGCGGGTTCGAGAAAACCGAAGGAGATGAGTTCTTGTTTCTGCCAAGAGAGAAAGTGGATGTTGGGGTGTTGAACTCAGGTGGTTCAGAGCTGGACTCTGCCTTGAAGAATCCCTTTTTTGGGGTTCTTTAA 1233 45.5 MAGVSLKCGDCGALLRSIQEAQEHAELTSHSNFSESTEAVLNLVCTTCGKPCRSKTETDLHTKRTGHAEFADKTSEAAKPISLEVPKLAEEAEEAADASTSQPEEMVVPEVDKKLLEELEAMGFSTARATRALHYSGNSGVDAAVNWVVEHEDDPEIDQMVPLNTKAEASKPSLSPEEIKAKQQELRERARKKKEEEAKKKERERERERIRVGKELLEAKRIEEDNERKRIMALRKAEKDEEKRARDKIRQKLEEDKAERRRKLGLAPEDPSTVKPSALVVEEKKSMLPVRPATKAEQMRECLRTLKQHHKASAFRLVKRAFQTLLTYVGNVARNPGDEKFRKIRLTNQSFQERVGGLKGGVEFLELCGFEKTEGDEFLFLPREKVDVGVLNSGGSELDSALKNPFFGVL 410
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
16 26431178 26436854 - BLOR07929 Blo16g00681 71872
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00681 410 Pfam PUB domain 318 387 IPR018997 -
Blo16g00681 410 Gene3D - 112 157 - -
Blo16g00681 410 PANTHER F13M7.16 PROTEIN 1 410 - -
Blo16g00681 410 Pfam UBA/TS-N domain 116 147 IPR015940 -
Blo16g00681 410 SMART uba_6 112 150 IPR015940 -
Blo16g00681 410 MobiDBLite consensus disorder prediction 236 268 - -
Blo16g00681 410 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 110 151 IPR015940 -
Blo16g00681 410 CDD PUB_UBA_plant 303 410 - -
Blo16g00681 410 Coils Coil 179 211 - -
Blo16g00681 410 MobiDBLite consensus disorder prediction 167 208 - -
Blo16g00681 410 Gene3D - 300 399 - -
Blo16g00681 410 MobiDBLite consensus disorder prediction 173 208 - -
Blo16g00681 410 ProSitePatterns Zinc finger C2H2 type domain signature. 8 30 IPR013087 -
Blo16g00681 410 ProSitePatterns Zinc finger C2H2 type domain signature. 45 67 IPR013087 -
Blo16g00681 410 SMART PGNneu 320 383 - -
Blo16g00681 410 SUPERFAMILY UBA-like 90 162 IPR009060 GO:0005515
Blo16g00681 410 PANTHER F13M7.16 PROTEIN 1 410 - -
Blo16g00681 410 Coils Coil 235 259 - -
Blo16g00681 410 CDD UBA_PUB_plant 110 158 - -
Blo16g00681 410 SUPERFAMILY PUG domain-like 299 406 IPR036339 -
Blo16g00681 410 MobiDBLite consensus disorder prediction 236 274 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00681 Blo-Chr16:26431178 Blo16g00788 Blo-Chr16:33108228 2.21E-16 dispersed
Blo01g00769 Blo-Chr1:10842028 Blo16g00681 Blo-Chr16:26431178 1.87E-07 transposed
Blo16g00681 Blo-Chr16:26431178 Blo02g00232 Blo-Chr2:2224924 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00681 K24348 - jre:109003439 633.254