Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00685 ATGCTTTCTGGGTTTTCTCAGGAAAGTTCGAGAATGTATTCGGCTCTCCACTCTCTCCCGCTCGACGTCAAGATTCAGGGACCTTTGCAAGGAACCAACTTGCCCGGCGACGCTTGTTTGGTTCTCTCTTCTGATCCTAAGCCCCGCCTCCGGTGGACGGCGGAGCTCCATGAGAGATTCGTCGACGCTGTAACTCAACTCGGTGGCCCTGAAAAAGCAACACCTAAGACTATTATGAGAACAATGGGAGTAAAAGGCTTAACCCTTTATCACTTGAAATCGCACCTCCAGAAATACCGGTTGGGGAAGCAATCGAGCAAGGAATTTACAGACAATATGAAGGATGGGTCTAGCATTTCGCAAAATCCGGACTCTACTTCCTCGCCTCTAACATCGCCGAGAATGATACCACAAGACATGAATGACTGTTATCAAGTAACCGAGGCTTTGCGCGATCAAATGGAAGTTCAAAGGAGACTACACGAGAAGCTGGAGGTGCAGCGCCGGCTTCAAATTCGAATCGAAGCACATGGAAAATACCTGCAAACGATCCTCGAGAAAGCATGTCAAGCTGTGAGTGATCAAGCTGCTGCCTCAGCCGGGCTGGAATCTGCAAGAGAAGAGCTGTCTGAGCTGGCAATTAAGGTATCGACCGATTATCGAGGAATGGGTTCGAATGATACCCTCAAAATGCCGTCTTTGTCAGAACTCTCGGCAGCTCTCGAAAATCGAAATGCTCCCCGCAATGTTCCTTCTCGTATGGGCGATTGCTCGGGGGAGAGCTGCTTGACATCGGCTGGAAGCCCTGTTTCTTCAATGGGAATCGGCTCAACCACTGCAGTAATGGAGAAGAGACCGAAATCATTGTTCGGAATCAGGGATTCGTTGCCTTTGGACCCGAACATTCAACACGAGATCGAATGGATGATGACAAACATTGGATGA 945 49.21 MLSGFSQESSRMYSALHSLPLDVKIQGPLQGTNLPGDACLVLSSDPKPRLRWTAELHERFVDAVTQLGGPEKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSSKEFTDNMKDGSSISQNPDSTSSPLTSPRMIPQDMNDCYQVTEALRDQMEVQRRLHEKLEVQRRLQIRIEAHGKYLQTILEKACQAVSDQAAASAGLESAREELSELAIKVSTDYRGMGSNDTLKMPSLSELSAALENRNAPRNVPSRMGDCSGESCLTSAGSPVSSMGIGSTTAVMEKRPKSLFGIRDSLPLDPNIQHEIEWMMTNIG 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 26475340 26478344 - BLOR07933 Blo16g00685 71876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00685 314 Gene3D - 46 104 - -
Blo16g00685 314 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 47 102 IPR006447 GO:0003677
Blo16g00685 314 Pfam MYB-CC type transfactor, LHEQLE motif 145 190 IPR025756 -
Blo16g00685 314 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Blo16g00685 314 PANTHER PROTEIN PHR1-LIKE 2 12 311 - -
Blo16g00685 314 Pfam Myb-like DNA-binding domain 50 100 IPR001005 -
Blo16g00685 314 MobiDBLite consensus disorder prediction 111 135 - -
Blo16g00685 314 MobiDBLite consensus disorder prediction 103 136 - -
Blo16g00685 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 104 IPR017930 -
Blo16g00685 314 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 311 IPR044848 GO:0003700
Blo16g00685 314 Coils Coil 147 167 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00455 Blo-Chr4:3788347 Blo16g00685 Blo-Chr16:26475340 9.41E-71 dispersed
Blo07g01419 Blo-Chr7:34184185 Blo16g00685 Blo-Chr16:26475340 1.26E-64 dispersed
Blo09g00329 Blo-Chr9:13637275 Blo16g00685 Blo-Chr16:26475340 2.53E-62 dispersed
Blo13g00605 Blo-Chr13:28469327 Blo16g00685 Blo-Chr16:26475340 1.86E-66 dispersed
Blo14g00044 Blo-Chr14:272266 Blo16g00685 Blo-Chr16:26475340 1.27E-62 dispersed
Blo16g00685 Blo-Chr16:26475340 Blo02g00231 Blo-Chr2:2205649 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13422 PF00249 Myb_DNA-binding 2.70E-07 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00685 - - vvi:100250267 421.394