Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00687 ATGGGTGGTGAAGGAAACGTCTTAACTTTGAAAGAAGTCTCGGAGCACAACACGCCCAAGGACTGTTGGCTAATCATCAATGGCAAAGTGTATGATGTGACCAAGTTCTTGGATGACCATCCTGGTGGCGATGACGTCCTGTTATCGGCTACCGGAAAGGATGCAACTGATGATTTTGAAGATGTGGGTCACAGTGACAGTGCAAGAGAAATGATGGACAAATACTATGTTGGTGAGATTGATTCTGCGACTATTCCAAAAAAAACAACTTATGTGCCTCCAAAACAGCCTCATTACAATCAGGACAAGACATCTGAGTTCATCGTCAAGCTCCTTCAATTCCTCGTCCCGCTCGCTATATTGGGTTTGGCCGTTGGAATTCGCTTCTACACGAAATCAAGC 402 45.02 MGGEGNVLTLKEVSEHNTPKDCWLIINGKVYDVTKFLDDHPGGDDVLLSATGKDATDDFEDVGHSDSAREMMDKYYVGEIDSATIPKKTTYVPPKQPHYNQDKTSEFIVKLLQFLVPLAILGLAVGIRFYTKSS 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 26502338 26504374 + BLOR07935 Blo16g00687 71878

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00687 134 Gene3D - 3 84 IPR036400 -
Blo16g00687 134 PANTHER CYTOCHROME B5 1 132 - -
Blo16g00687 134 SMART Cyt_b5_2 8 81 IPR001199 -
Blo16g00687 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 92 IPR036400 -
Blo16g00687 134 PANTHER CYTOCHROME B5 1 132 - -
Blo16g00687 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Blo16g00687 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Blo16g00687 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Blo16g00687 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Blo16g00687 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Blo16g00687 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Blo16g00687 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00687 K23490 CYB5; cytochrome b5 - qsu:112039863 253.447
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00216 Blo-Chr1:2801302 Blo16g00687 Blo-Chr16:26502338 1.23E-13 dispersed
Blo16g00687 Blo-Chr16:26502338 Blo17g00195 Blo-Chr17:1969855 1.41E-18 dispersed
Blo07g01073 Blo-Chr7:30552710 Blo16g00687 Blo-Chr16:26502338 1.29E-50 transposed
Blo09g00007 Blo-Chr9:61155 Blo16g00687 Blo-Chr16:26502338 3.62E-67 transposed
Blo10g00592 Blo-Chr10:17678429 Blo16g00687 Blo-Chr16:26502338 5.54E-38 transposed
Blo16g01076 Blo-Chr16:39307013 Blo16g00687 Blo-Chr16:26502338 3.71E-27 transposed
Blo16g00687 Blo-Chr16:26502338 Blo02g00229 Blo-Chr2:2178838 8.80E-70 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo09g00007 . 31 164 NADPH P450 reductases AT5G53560 81.3 2.7e-61 231.5
Blo16g00687 . 1 134 NADPH P450 reductases AT5G53560 69.4 6.0e-53 203.8
Blo02g00229 . 16 121 NADPH P450 reductases AT5G53560 69.8 7.6e-40 160.2
Blo16g00687 . 1 134 NADPH P450 reductases AT5G48810 66.9 2.6e-51 198.4
Blo09g00007 . 31 164 NADPH P450 reductases AT5G48810 62.5 1.8e-47 185.7
Blo07g01073 . 1 138 NADPH P450 reductases AT5G48810 56.7 7.9e-40 160.2
Blo16g00687 . 22 133 NADPH P450 reductases AT2G32720 83.0 3.6e-50 194.5
Blo02g00229 . 16 120 NADPH P450 reductases AT2G32720 84.8 1.7e-47 185.7
Blo09g00007 . 52 163 NADPH P450 reductases AT2G32720 67.9 9.0e-41 163.3
Blo07g01200 . 399 723 NADPH P450 reductases AT5G17770 68.9 1.4e-123 439.5
Blo08g00150 . 8 278 NADPH P450 reductases AT5G17770 76.0 1.8e-120 429.1
Blo09g00346 . 2 251 NADPH P450 reductases AT5G17770 80.0 2.3e-115 412.1
Blo09g00007 . 31 164 NADPH P450 reductases AT5G53560 81.3 2.7e-61 231.5
Blo16g00687 . 1 134 NADPH P450 reductases AT5G53560 69.4 6.0e-53 203.8
Blo02g00229 . 16 121 NADPH P450 reductases AT5G53560 69.8 7.6e-40 160.2
Blo16g00687 . 1 134 NADPH P450 reductases AT5G48810 66.9 2.6e-51 198.4
Blo09g00007 . 31 164 NADPH P450 reductases AT5G48810 62.5 1.8e-47 185.7
Blo07g01073 . 1 138 NADPH P450 reductases AT5G48810 56.7 7.9e-40 160.2
Blo16g00687 . 22 133 NADPH P450 reductases AT2G32720 83.0 3.6e-50 194.5
Blo02g00229 . 16 120 NADPH P450 reductases AT2G32720 84.8 1.7e-47 185.7
Blo09g00007 . 52 163 NADPH P450 reductases AT2G32720 67.9 9.0e-41 163.3
Blo07g01200 . 399 723 NADPH P450 reductases AT5G17770 68.9 1.4e-123 439.5
Blo08g00150 . 8 278 NADPH P450 reductases AT5G17770 76.0 1.8e-120 429.1
Blo09g00346 . 2 251 NADPH P450 reductases AT5G17770 80.0 2.3e-115 412.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000252 4 9 3 5 3 5 9 4 4 3 4 4 8 5 5 9 5 6 9 4 5 4 5 5 4 4 4 10 5 2 156
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g00687 Blo_Chr16 FPKM 7.538802 7.574888 0.0 0.0 1.392473 1.253405 1.23589 0.0 0.0 0.0