Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo16g00705 | ATGAATTCCACCATTTTGTCCTGCAACTACGCCATTTCAGGTGCTGGACTGTCCGAGCTCGGCGCCAAGCTCAATTCAAGTACGTCGATTGCTTCGCCTGTTGGGTCTTCTGCTCAGAAAGTGCCTGCTATCAGAGCCCAACGAGCTAGGGTGTCGAATGACCAGGAATTAAAAGGTATAGATGGAAGAAGGGCTGCTCTTGCTTTACTCGCTGCTACAATTTTTGCTTCCGCTTCTAACTCCTCCGCAAATGCTGGGATTATTGATGAATACCTCGAGAAGAGTAACGCCAACAAAGAGCTGAATGACAAGAAAAGGCTGGCCACTAGTGGTGCAAACTTTGCAAGAGCGTACACTGTTCAGTTTGGGACTTGCAAGTTCCCAGAAAATTTCACCAGCTGCCAAGATCTGGCTAAGCAAAAGAAAGTTCCATTCCTGAGTGATGATTTGGAGTTGGAATGTGAAGGTAAAGACAAATACAAGTGTGGTTCCAATGTTTTCTGGAAATGGTGA | 513 | 46.0 | MNSTILSCNYAISGAGLSELGAKLNSSTSIASPVGSSAQKVPAIRAQRARVSNDQELKGIDGRRAALALLAATIFASASNSSANAGIIDEYLEKSNANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTSCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW | 170 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 27057301 | 27058082 | - | BLOR21492 | Blo16g00705 | 71896 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo16g00705 | 170 | PANTHER | PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC | 1 | 170 | IPR008796 | GO:0009522|GO:0015979 | |
| Blo16g00705 | 170 | Pfam | Photosystem I reaction centre subunit N (PSAN or PSI-N) | 41 | 170 | IPR008796 | GO:0009522|GO:0015979 | |
| Blo16g00705 | 170 | Gene3D | - | 86 | 170 | IPR044907 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo16g00544 | Blo-Chr16:22431760 | Blo16g00705 | Blo-Chr16:27057301 | 1.42E-70 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo16g00705 | K02701 | - | tcc:18611871 | 250.366 |