Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00711 ATGGCAACCAGATACTGGGTGGTCTCTCTCCCGGTTCAAAGTTCAGCATCCACCGTGTGGAGCCATCTGCAAGAACAAATCTCCAAGCATTCCTTCGACACTTCTCTTTATAAATTCAATATCCCTAATCTCCGCGTTGGAACTCTGGATTCGCTCCTTTCACTAAGCGACGATCTCTTAAAGTCGAATAGCTTTGTGGAAGGGGTGTCTCACAAGATAAGGCGTCAGATTGATGAATTGGAAAGAGCATCGAGCTTGGAGAGCACGGGTATGACGGTAGACGGCGTACCAGTAGAATCATATCTCACTAGGTTCATATGGGATGAAGCCAAGTACCCGACGATGTCACCTTTGCGGGAAACTGTGGATAGCATTCATGGTTTGGTAGCAAAGATTGAGGATGATCTTAAGGTTCGTGTTTCTGAGTACAGTAATGTGCGCAGTCAGTTGAATGCCATCAATCGAAAGCAAAGTGGAAGCTTAGCTGTCCGTGATCTTTCCAACCTTGTGAAACCAGAGGATATAATAACATCAGAGCATCTTGTAACACTACTTGCAATTGTTCAGAAGTATTCACAGAAGGAATGGCTGTCTAGCTATGAAACATTGACAAGCTATGTGGTCCCAAGGTCTTCGAAGAAGTTATATGAAGATAATGAGTATGCCCTTTATACTGTGACACTATTTGGCCGTGTTGCCGATAATTTTAGAACAAGCGCACGGGAGAGAAACTTTCAGATTCGTGATTTTGAATATAGTCCAGAAGCACAAGATAGCAGGAAGCAGGAGCTACAAAAGTTGGTGCAGGACCAGGAAAGTTTGAGAAGCTCTCTTTTGCAGTGGTGTTATGCCAGTTATGGTGAGGTTTTCAGCTCCTGGATGCACTTTTGTGCAGTACGTGTTTTTGCTGAGAGCATTCTTAGATATGGTTTGCCGCCGTCTTTCTTGGCTTGTGTTTTAGCTCCATCTGTGAAAAGTGAGAAAAAGGTGAGATCAATTCTCGAAGGGTTCACGTATTGGAAAACAGAAGATGATGTGGGAGGGGGGATGGTTGGTCTGGCAGGGGATGCCGATGCCCATCCTTACGTCTCCTTTACAGTAAATCTTGTT 1110 44.5 MATRYWVVSLPVQSSASTVWSHLQEQISKHSFDTSLYKFNIPNLRVGTLDSLLSLSDDLLKSNSFVEGVSHKIRRQIDELERASSLESTGMTVDGVPVESYLTRFIWDEAKYPTMSPLRETVDSIHGLVAKIEDDLKVRVSEYSNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAIVQKYSQKEWLSSYETLTSYVVPRSSKKLYEDNEYALYTVTLFGRVADNFRTSARERNFQIRDFEYSPEAQDSRKQELQKLVQDQESLRSSLLQWCYASYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKSEKKVRSILEGFTYWKTEDDVGGGMVGLAGDADAHPYVSFTVNLV 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 27263887 27270075 - BLOR21498 Blo16g00711 71902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00711 370 Gene3D - 41 312 - -
Blo16g00711 370 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 369 - -
Blo16g00711 370 Gene3D Vacuolar atp synthase subunit c; domain 1 5 338 - -
Blo16g00711 370 CDD V-ATPase_C 5 367 IPR004907 GO:0033180|GO:0046961|GO:1902600
Blo16g00711 370 Pfam V-ATPase subunit C 5 336 IPR004907 GO:0033180|GO:0046961|GO:1902600
Blo16g00711 370 Gene3D - 163 251 - -
Blo16g00711 370 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 369 IPR004907 GO:0033180|GO:0046961|GO:1902600
Blo16g00711 370 SUPERFAMILY Vacuolar ATP synthase subunit C 1 369 IPR036132 GO:0015078|GO:0033180|GO:1902600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00711 K02148 - qsu:112025646 645.58