Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00714 ATGAAGAGGGAACTCTACCAGGTAAATCTTCAGCCTGACCCGTCTTCAATGGCCGGGAAATCCAAGGTTTGGGAAGATGAGTCACAACGAGATGGAGGTATGGATGAACTTTTGGCTGTTTTGGGATACAAAGTAAGGTCGTCAGACATGGCCAACGTTGCCCAGAAGCTAGAACAGCTTGAAGAATTTATGGGTAATGTTCAGGAAGATGGTCTCGCGCATCTTGCATCGGATACTGTCCATTATAATCCCTCTGATCTTTCCGCCTGGCTTGAAAGCATGATTGACGAGCTTAACCCATCTCCAACTTTCGATTGCGTTGTCGGTCCGCTGTCTCAAACGCCGGTAGACGATCCGTTTCTAGCTTCGGCCAATTCCTCCACCATAACCTCCGTTGATTTCTCAAAACAGAGAAACCAAAGGTTGTTCGAAGAGTCTTCCTGTTCAGATTATGATCTGAAAGCTATCCCGGGTAAGGCTATTTTTAAACAAAATACTCAGTACGAAGAAACATCGGATAGAGAGAAGAAACGATTGAAACCTTCATCTGTGCCGGAATCGGAATTGCTTTCCGATTCAATAACTCGGCCTGTAATCCTAGTTGACTCGCAAGAAAACGGAATTCAACTCGTACACACTCTGATGGCTTGCGCCGAAGCTGTTCACCAAAACAGCCTAAATCTGGCTGAGGCTCTCCTCAAACGAGTTGGCTATCTCGCTGTGTCTCAAACTGGAGTTATGCGGAAAGTCGCCGCCTACTTCGCCGAAGCACTAGCTCGGAGGATTTACAGGCTCTACCCTCAGAACGCCCTCGACCATTCCTTTTCTGATTTGCTTCAAGTTCATTTCTACGAGAGCTGTCCTTATCTTAAATTTGCTCATTTCACTGCAAATCAAGCGATTCTCGAAGCTTTTGAAGGAAAAAATCGAGTCCACGTTATTGATTTTTCTATGAATCAAGGTATGCAATGGCCGGCACTTCTTCAAGCTCTGGCTGTGCGACCTGGTGGTCCACCTGTTTTCCGTCTCACTGGAATTGGGCCTCCTGCGCCGGATAATTCAGATTACCTCCAAGAAGTGGGTTGGAAGCTCGCCCGATTGGCTGATATGATTCACGTTGAGTTTGAATACCGTGGGTTTGTTGCCAACAGCTTGGCAGATCTTGAATCGTCGATGCTCGAACTTAGGCCGAGTGAAACCGAGACAGTGGCGGTCAACTCAATTTTCGAGTTTCATAAGCTCTTGGCTCGGCCTGGAGCAATCGGAAAAGTGTTGTCAGTCGTTAAGCAGATGAAGCCGGCGATTATGACTGTAGTTGAGCAAGAAGCTAGCCATAACGGCCCGGTCTTTCTGGACCGGTTCACCGAGTCACTGCACTATTACTCGACTCTTTTTGACTCGTTGGAAGGCTCAGCCACCGCTAACAATCAAGACAAGGTAATGACAGAGATGTACTTAGGGAAACAAATTTGCAACGTGGTTGCATGTGAAGGCGCAGACCGGGTGGAGCGGCATGAGAATCTGACTCAGTGGCGAACTCGGTTCGTCACAGCTGGGTTCAACTCGGCTTATTTAGGGTCTAACGCGTTCAAACAAGCTAGAATGCTGCTTGCTCTGTTTGGAAGTGGAGATGGGTACGGAGTCGACGAGAGAAATGGGTGTCTGATGCTGGGTTGGCACACCAGACCTCTCATCACTACCTCAGCCTGGACGGTGGAAGAGAAAGCTCACAGTGTCGCTGAGTCAACTCGGTAA 1755 48.09 MKRELYQVNLQPDPSSMAGKSKVWEDESQRDGGMDELLAVLGYKVRSSDMANVAQKLEQLEEFMGNVQEDGLAHLASDTVHYNPSDLSAWLESMIDELNPSPTFDCVVGPLSQTPVDDPFLASANSSTITSVDFSKQRNQRLFEESSCSDYDLKAIPGKAIFKQNTQYEETSDREKKRLKPSSVPESELLSDSITRPVILVDSQENGIQLVHTLMACAEAVHQNSLNLAEALLKRVGYLAVSQTGVMRKVAAYFAEALARRIYRLYPQNALDHSFSDLLQVHFYESCPYLKFAHFTANQAILEAFEGKNRVHVIDFSMNQGMQWPALLQALAVRPGGPPVFRLTGIGPPAPDNSDYLQEVGWKLARLADMIHVEFEYRGFVANSLADLESSMLELRPSETETVAVNSIFEFHKLLARPGAIGKVLSVVKQMKPAIMTVVEQEASHNGPVFLDRFTESLHYYSTLFDSLEGSATANNQDKVMTEMYLGKQICNVVACEGADRVERHENLTQWRTRFVTAGFNSAYLGSNAFKQARMLLALFGSGDGYGVDERNGCLMLGWHTRPLITTSAWTVEEKAHSVAESTR 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 27676282 27678036 - BLOR21501 Blo16g00714 71905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00714 584 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 14 572 IPR005202 -
Blo16g00714 584 ProSiteProfiles GRAS family profile. 201 571 IPR005202 -
Blo16g00714 584 SMART DELLA_2 35 108 - -
Blo16g00714 584 MobiDBLite consensus disorder prediction 165 188 - -
Blo16g00714 584 MobiDBLite consensus disorder prediction 168 183 - -
Blo16g00714 584 Gene3D - 33 98 IPR038088 -
Blo16g00714 584 PANTHER DELLA PROTEIN GAI1-RELATED 14 572 IPR030006 GO:0003712|GO:0005634
Blo16g00714 584 Pfam GRAS domain family 210 571 IPR005202 -
Blo16g00714 584 Coils Coil 50 70 - -
Blo16g00714 584 MobiDBLite consensus disorder prediction 1 29 - -
Blo16g00714 584 Pfam Transcriptional regulator DELLA protein N terminal 35 102 IPR021914 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00411 Blo-Chr4:3372427 Blo16g00714 Blo-Chr16:27676282 7.23E-68 dispersed
Blo04g01183 Blo-Chr4:21268464 Blo16g00714 Blo-Chr16:27676282 1.58E-72 dispersed
Blo05g00280 Blo-Chr5:3067637 Blo16g00714 Blo-Chr16:27676282 3.84E-59 dispersed
Blo16g00254 Blo-Chr16:5893820 Blo16g00714 Blo-Chr16:27676282 7.24E-66 dispersed
Blo16g00714 Blo-Chr16:27676282 Blo17g00458 Blo-Chr17:6072350 0 dispersed
Blo18g00188 Blo-Chr18:1809599 Blo16g00714 Blo-Chr16:27676282 6.81E-46 transposed
Blo19g00308 Blo-Chr19:19773514 Blo16g00714 Blo-Chr16:27676282 2.35E-12 transposed
Blo01g00753 Blo-Chr1:10017385 Blo16g00714 Blo-Chr16:27676282 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13425 PF03514 GRAS 6.10E-133 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00714 K14494 - csv:101204164 845.114