Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00756 ATGGCTACCGTACAGAGAGTATCGCAGTCCAGTTTAGGGGCAAGTTCGAGCAATTATGGCTTAAGTAAGGGTAGCAGTAACGGTGGTGTAGAATCTGTTGATTCGGATCAGTTTCCCGCGGGATTGAGGGTTCTTGTTGTTGACGATGACACCACCTGCTTGAGGATTATCGAGCAGATGCTACGCCGGTGTCTATATCACGTGACTATATGTTCCCAAGCTGCTGTTGCTCTAAACCTTCTGCGTGAGAAGAAAGGCTGTTTTGATGTGGTATTGAGCGATGTCCATATGCCTGATATGGATGGATATAAGCTCCTTGAATATGTTGGGCTTGAGATGGACCTTCCTGTCATAATGATGTCGGCTGATAAAAGAACAAGTGCTGTGATGAAAGGAATCAGACATGGGGCTTGTGATTATTTAATTAAGCCCATTCGCGAGGAAGAACTGAAGAATATCTGGCAGCATGTTGTTAGAAAAAAATGGAATGAATATAAGGAACTTGAAAATTCTGGAAGTTTGGAAGAGAATGATAAGCAAATGCATGGGACTGATGATGCAGAATGTGCTTCTTCTGATCACGATGGTGAAGAAGGAATCCTGCGAGCTACTAGAAAAAGGAGCAGTTCAAAAGAAGACGACAGTGAACTGGAAAATGATGATCCTTCTTCCTCAAAGAAGCCACGAGTGGTATGGTCTGTAGAGTTGCACCAACAATTTGTCAGTGCTGTGAACCAACTCGGCCTAGATAAGGCTGTGCCTAAGAGGATTCTTGAATTAATGAACGTACCTGGTTTAACAAGAGAAAATGTTGCTAGCCATCTGCAGAGTATGCTAACAAGTTCAGAATTATCACAAAAGCAAGCTATGGATGATTGGCGAAAAGAAGTCATCACTATTAAGAAAGAATTGAAAGATCTGGATAAACTTTCTGCTATAGAAAAAAGCTTGTTGGTTATCCGAGAATTATTATATCAATTGGTTGCAAAGTTCGAAGACAGACAACAAAGGGTTCTCGGAAAAGTTCCGTGCAGGCAAATTGGAGATGTACGAATTCAGTCACAGAATCTGAAGGAGATGATCCACGAAGAAAGGTTGGAGGCACTAAAGAAGGCCGAGAGGGAAAATGAAATCGGGTAG 1140 42.19 MATVQRVSQSSLGASSSNYGLSKGSSNGGVESVDSDQFPAGLRVLVVDDDTTCLRIIEQMLRRCLYHVTICSQAAVALNLLREKKGCFDVVLSDVHMPDMDGYKLLEYVGLEMDLPVIMMSADKRTSAVMKGIRHGACDYLIKPIREEELKNIWQHVVRKKWNEYKELENSGSLEENDKQMHGTDDAECASSDHDGEEGILRATRKRSSSKEDDSELENDDPSSSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQSMLTSSELSQKQAMDDWRKEVITIKKELKDLDKLSAIEKSLLVIRELLYQLVAKFEDRQQRVLGKVPCRQIGDVRIQSQNLKEMIHEERLEALKKAERENEIG 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 31212837 31216547 - BLOR21543 Blo16g00756 71947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00756 379 MobiDBLite consensus disorder prediction 1 30 - -
Blo16g00756 379 Pfam Myb-like DNA-binding domain 229 279 IPR001005 -
Blo16g00756 379 SUPERFAMILY Homeodomain-like 225 277 IPR009057 -
Blo16g00756 379 CDD REC_typeB_ARR-like 44 158 - -
Blo16g00756 379 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 224 283 IPR017930 -
Blo16g00756 379 SMART REC_2 42 154 IPR001789 GO:0000160
Blo16g00756 379 Gene3D - 223 283 - -
Blo16g00756 379 Coils Coil 290 310 - -
Blo16g00756 379 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 227 277 IPR006447 GO:0003677
Blo16g00756 379 MobiDBLite consensus disorder prediction 173 225 - -
Blo16g00756 379 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 302 - -
Blo16g00756 379 MobiDBLite consensus disorder prediction 173 228 - -
Blo16g00756 379 SUPERFAMILY CheY-like 41 168 IPR011006 -
Blo16g00756 379 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 302 IPR045279 GO:0009736
Blo16g00756 379 Gene3D - 42 182 - -
Blo16g00756 379 ProSiteProfiles Response regulatory domain profile. 43 158 IPR001789 GO:0000160
Blo16g00756 379 Pfam Response regulator receiver domain 44 152 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00058 Blo-Chr10:579246 Blo16g00756 Blo-Chr16:31212837 3.48E-29 dispersed
Blo12g00090 Blo-Chr12:6259518 Blo16g00756 Blo-Chr16:31212837 1.12E-110 dispersed
Blo16g00756 Blo-Chr16:31212837 Blo16g01182 Blo-Chr16:40356446 3.94E-90 dispersed
Blo16g00756 Blo-Chr16:31212837 Blo01g00772 Blo-Chr1:11099972 1.88E-175 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13427 PF00072 Response_reg 8.10E-23 CL0304 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00756 - K14491 jcu:105634128 434.876