Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00757 ATGGCGCTGGCGAAGGAAGAAGAAGAGGAGGAGAAGGTTCGGAGCTCTGGAAAGAGATTGAAATGCACCGTGGATGAAGATGATGAAGACGGAGAAGAACGATTTTGCAGCGAAGACGACCGAAGAGACGATTTTCCACTGAAACCTGGCTTGTTCTACTACCCAATCGCCCCCACTTCCTTCGTCGTCTCCGATGCTTTGGAGCCTGATTTTCCTATCATTTATGTCAACAAAGTCTTTGAGATCTTCACTGGATATCGCGCTGATGAGATCCTTGGTCGAAATTGTCGGTTCTTACAAAATAGGGATCCTAGTGCCCAAAGGCGACATCCTCTGGTAGATCCAGTTGTTGTTTCTGAAATAAGAAGATGCCTTGAGGAGGGAATTGAATTTCAAGGCGAGCTTCTCAATTTCAGGAAAGATGGGACGCCCTTGGTGAACAGGCTGAGACTTGCACCCATACACGACAATGATGGAATTGTGACACATGTAATTGGGATTCAAGTATTTTCTGAAGCAAAATTAGATCTGAACCGAGTATCATATCCAGTTTTTAAAGAGACTTGCAATCAATATAATGATCATTCGGGAGAATATGCTTCTCTGACTGGACGATTGCCATTCATCCAACGGGAGGAGATATGTGGGATGCTTCAGCTATCTGATGAAGTCTTGGCCCACAACATTCTATCTCGCTTGACACCGAGAGATGTTGCATCTGTTGGATCTGTGTGCCGAAGAATTCGTCAGTTGACTAAAAATGAGCATCTAAGGAAGATGGTATGCCAAAATGCATGGGGAAGGGAAGTCACTGGCACGTTGGAACTGATTACTAAGAAGTTAGGTTGGGGTCGTTTGGCAAGGGAACTGACGACTCTTGAGGCTATTTGTTGGAGGAAACTGACAGTTGGCGGGGCTGTCGAGCCTTCACGGTGCAATTTTAGTGCTTGTGCCGCTGGAAACAGACTTGTGTTATTTGGAGGAGAAGGCGCTAATATGCAGCCTATGGATGATACATTTGTCCTTAATCTTGATTCAGCCCATCCCGAGTGGCGTAGAGTGATTGTACAATCATCCCCACCAGGGCGCTGGGGCCATACTCTCTCGTGTTTGAATGATTCTTGGTTAGTGGTATTCGGAGGGTGTGGGAGAGAAGGATTACTAAATGATGTCTTTGTACTTGACTTAGATGCCAAACAGCCGACATGGAAAGAAGTTTCTGGTGGAACTCCTCCACTCCCTCGATCATGGCATAGCTCTTGCACGATTGAAGGATCTAAACTAGTCGTCTCCGGTGGATGTACAGATGCAGGAGTTCTTCTCAGTGACACATATTTGTTGGATCTTACAAAAGATAAGCCAACCTGGAAAGAGATTCCAACTTCGTGGACGCCGCCATCAAGGTTAGGACATTCTCTTTCGGTATATGGTCGGACAAAAATTCTCATGTTTGGTGGTCTAGCCAAAAGTGGGCACTTACGGTTAAGATCAGGTGAGGCTTACACCATCGATTTAGAAGAGGAAATGTCTCAGTGGAGGCTGCTTGAGTGTAATACATTCACTGGCTTAGGCAGCCAAAGCGCAGCCGTTCCACCTCCTAGACTCGATCATGTAGCAGTGAGCATGCCCTGTGGAAGGATCATAATCTTTGGAGGTTCCATTGCCGGATTGCACTCACCTTCTCAGCTCTACCTATTAGACCCTTCGGAAGAAAAGCCATCGTGGAGGATACTAAACGTCCCAGGCCAACCACCCAAATTTGCATGGGGACATAGCACTTGTGTGGTCGGAGGTACTCGAGTTCTGGTCTTGGGAGGTCACACTGGGGAGGAGTGGATACTCAATGAGTTGCATGAGCTACGCTTGGCAAGCAGACAAGACTGA 1884 46.82 MALAKEEEEEEKVRSSGKRLKCTVDEDDEDGEERFCSEDDRRDDFPLKPGLFYYPIAPTSFVVSDALEPDFPIIYVNKVFEIFTGYRADEILGRNCRFLQNRDPSAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIHDNDGIVTHVIGIQVFSEAKLDLNRVSYPVFKETCNQYNDHSGEYASLTGRLPFIQREEICGMLQLSDEVLAHNILSRLTPRDVASVGSVCRRIRQLTKNEHLRKMVCQNAWGREVTGTLELITKKLGWGRLARELTTLEAICWRKLTVGGAVEPSRCNFSACAAGNRLVLFGGEGANMQPMDDTFVLNLDSAHPEWRRVIVQSSPPGRWGHTLSCLNDSWLVVFGGCGREGLLNDVFVLDLDAKQPTWKEVSGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTKDKPTWKEIPTSWTPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEEEMSQWRLLECNTFTGLGSQSAAVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLYLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELRLASRQD 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 31247868 31250275 + BLOR21544 Blo16g00757 71948

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00757 627 MobiDBLite consensus disorder prediction 1 40 - -
Blo16g00757 627 Gene3D - 513 626 IPR015915 GO:0005515
Blo16g00757 627 Gene3D PAS domain 56 179 - -
Blo16g00757 627 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 10 626 - -
Blo16g00757 627 Pfam F-box domain 218 257 IPR001810 GO:0005515
Blo16g00757 627 Pfam PAS domain 67 168 IPR000014 -
Blo16g00757 627 Pfam Kelch motif 535 582 IPR011498 GO:0005515
Blo16g00757 627 MobiDBLite consensus disorder prediction 1 25 - -
Blo16g00757 627 Pfam Galactose oxidase, central domain 425 476 - -
Blo16g00757 627 Pfam Galactose oxidase, central domain 376 423 - -
Blo16g00757 627 SUPERFAMILY PYP-like sensor domain (PAS domain) 68 168 IPR035965 -
Blo16g00757 627 SMART pac_2 132 173 IPR001610 -
Blo16g00757 627 Gene3D - 213 261 - -
Blo16g00757 627 SUPERFAMILY Kelch motif 298 504 IPR015915 GO:0005515
Blo16g00757 627 PANTHER ADAGIO PROTEIN 3 10 626 - -
Blo16g00757 627 Pfam Galactose oxidase, central domain 311 361 - -
Blo16g00757 627 Gene3D - 292 512 IPR015915 GO:0005515
Blo16g00757 627 TIGRFAM sensory_box: PAS domain S-box protein 72 167 IPR000014 -
Blo16g00757 627 SUPERFAMILY F-box domain 212 269 IPR036047 GO:0005515
Blo16g00757 627 SUPERFAMILY Kelch motif 516 621 IPR015915 GO:0005515
Blo16g00757 627 CDD PAS 57 167 IPR000014 -
Blo16g00757 627 ProSiteProfiles PAS repeat profile. 73 128 IPR000014 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00757 K12116 FKF1; flavin-binding kelch repeat F-box protein 1 - mnt:21388994 1098.57
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00757 Blo-Chr16:31247868 Blo16g00950 Blo-Chr16:37752491 0 dispersed
Blo16g00757 Blo-Chr16:31247868 Blo01g00677 Blo-Chr1:7835401 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g502 . Blo16g00757 . Bda11g00188 Bpe13g01006 . . . Cmo04g01103 . Cma04g01032 Cma04g00079 Car04g00963 Car04g00078 Sed04g2999 . . Bhi07g00405 Tan04g1496 Cmetu10g0634 Lac13g1318 Hepe01g0598 . . Cla07g00531 Cam07g0573 Cec07g0622 Cco07g0597 Clacu07g0576 Cmu07g0611 Cre07g0943 . . Cone6ag0358 Cone9ag0388 Lsi04g01097 . . . . . . Bda11g00188 . . . Bma06g01132 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008842 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g00757 Blo_Chr16 FPKM 0.0 9.895361 5.33478 7.241841 0.0 6.081247 4.030319 5.005033 5.922639 6.390017