Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00765 ATGAGTCCCCGTTTTGCTCAAGAGGCATCTCATGCTTTTGATAAGACCGGAGGAGGGAGGGATTTGGCTGCTGAGCTGGAGTCTGAAAAACATGTTGTTATAAATGCAACTGCCCCTTACATTAAGATGGTCAGTGAGCAATTTGATAGATGCCATGGTACGCTACTTCAGTATGTAGATTTCTTAACTACTGTGGTGACACCTGCATCAGCTTATGCCCAGTTGATTCCCTCATTGAATGATCTTGTCCACTTGTATCACCTTGATCCGGAGGTTGCATTCTTAATATTCCGCCCTGTTATGAGGCTGTTTAAGGGTCAGGATCGGTCTGATGTCTTCTGGCCTTTGGATGACAAAGTTTCAAATATTGTGGACATGAACTCGGAATCTGAACGGACACAAGATACTGCTAATGTGGTTTTAGATCTTGGCCCTCCACGAGAACCTATAAAGTGGTCAGATCTTCTAGAGACTGTTAAATTCATGTTGCCAACTAAAGCATGGAACAGCCTATCTCCAGATCTCTACGCTACATTTTGGGGGCTGACACTTTATGATCTTTATGTGCCTAGAAGTCGTTATGAATCCGAAGTTTCTAAGCAGCATGCTGCTCTCAAAGCTTTGGAAGAGCTCTCTGATAATTCAAGTTCAGCAATCACAAAGAGAAAAAAAGACAAGGAAAGAATACAAGAATCCCTTGATCGCTTGACTAGCAGACTTGGAAGATTTTTATATGAGACGCTCAAGATTGCTTATTTCTGGAAGAGCGATGAATCCATTTATGAGCGAGAGTGTGGAAATATGCCTGGTTTTGCTGTGTATTATCGATATCCGAACAGCCAGAGAGTCACGTATGGCCAATTCATTAAGATGATTTTTCTTTTTTTGATTGTTATAAAGTTCTTAAACACTTCAATTTTCCCTCTCTATGATGTAGCCAAGATCAAAAGTGATGAAAGAGAAGATTTGAAGGTGTTGGCAACCGGCGTAGCTGCAGCTTTAGCATCTAGAAAGTCTTCATGGGTTACTGATGAAGAATTTGGCATGGGATATCTTGAGCTAAAGGCTGCGCCACCTGTTACTTCAAAATCTTCCGCTAACAGTTTAGCAGCTATACAAAATAGTTCTGTTCATAATGTTTCTCAAAGTGAACCTGGTGGGGGAAAAACTGCTGCAGTAGGAAGCCACCATTCAGATTCTGGGAATCTGCTGAAAGATCAGAGGTCAAGATCTGGTGACGGTAAATCAGAACGAACAGATGGTGTTGCAAAATCTGATGCAGGGTTTGGAAAAGTAAAGAGTAATTTATCGGTGAATGGTTCAGATTCTCACTCGGCGATGCCTTCTGGGGCAGTACAAGTTGCAACATCTAGAGTAATTGAATATCAAAAACCAGCAGATGAGTTGAATAGAACAGTAGATGACAATGTTGTAAAAGTGGCTTCAAAGAACTCGATGGAATCTGAGTTGAGGGCTGCAGGAAAACGATCACAGCCTGCTGGTTCACTCAATAAGGCACCAAAACAAGATACTGCCAAAGATGACGGTAGATCTGGTAAAGCTTCTGGAAAACTTTCTGGCTCTTCCGCCAGTGATAGGGAGCTTCTTAGTCAAGCATCAGATAGTAGGCAGGGTGGAACTTCTAATATTCCCCCTTCTATGACAGGAAATGGTAACTCAATCACTGCTTTAGCTAGAGGTTCCTCATCATCTACAAGAGCATATGATATTCATGGTCCCGAACCTAAGGTAGAGGCTGGAGCTACCAAGTCGTTTGACTTAAGGGCTACTTCGGCTAAGGATGATGGCATTGATGGCCCTGATTTGCCAAGGGCCTCGTCTCGACTTGCTCAATCTCCCCGACATGATAGTTCTTCTAATGCTTCCAAATCTAGTGATAAAGTGCAGAAAAGGTCCAGTCCCGCTGAAGAGCCAGACAGGCAAATTAAACGCCGAAAAGGAGAGAATGAACCTAGGGAATCTGAAGGTGAAGTTCGTGGTTCTGACTTAGAGAGATTCGTCGATGCTGACAAATCAGGAATTGATGAACACAATGCTTATAAAGCTACAGATAAAAATGTGGATAGACCAAAAGACAAGGGAAATGAAAGGTATGATAGAGACTACAGGGATAGGTTAGATCGCACTGACAAGTCTCGGGGAGATGATACATTAGTGGAAAAAGTACGGGATAGATCAACGGAGAGATATGGACGAGAGCGCTCAGTTGAGCGACTTCAAGAGAGAGCCTCTGATAGGACTTTTGAAAGATATCCTGAGAAGCCAAAGATCGATAGAATAAAAGATGAGAGAACGAAAGTGCGATATAGTGAAGTATCTGCTGACAAATCTCTCATTGATGAGCGGTTTCACGGGCAAAGCTTGCCTCCCCCACCACCCATACCACCTCATCTGGTCCCCCAGTCAGTTAGCACCAGTAGAAGAGATGAAGATGGTGATAGGAGATTTGGGATTACGAGACATACTCAAAGACTTTCTCCAAGACATGAAGAGAAGGAAAGACGGCGATCAGAGGAGAGTTTAGTTGTACAGGATGATGCGAAGCGCAGAAGAGAAGAAGAGTTTCGAGAGAAGAAAAGAGAAGAACGAGAAGGGATGATTATGAAGGTGGAGGATAGAGAAAGGGATAGGGATAGAGAAAAGGCCAATCTTTTGAAGGAGGATATGGATGCAACTGCCGTGTCGAAAAGACGAAAACTCAAAAGAGAGCATCTTCCTTCTGGGGAAGCTGGAGAGTATTCACCTGTGTCTGCAGCTCCCCCACCACTTGGTGTTGGAGTTTCTCAGTCGTATGATGCAAGAGAGAGGGGAGATCGGAAAGGAGTCATGATGAGCCGTGGGGTATACTTGGATGAAACTGGTTCAAGGATTCATTCTAAAGAAGTAGCTAGCAAGATGACCCTTCGGGACTCTGACCAGTATCCTCTCTAA 2952 43.5 MSPRFAQEASHAFDKTGGGRDLAAELESEKHVVINATAPYIKMVSEQFDRCHGTLLQYVDFLTTVVTPASAYAQLIPSLNDLVHLYHLDPEVAFLIFRPVMRLFKGQDRSDVFWPLDDKVSNIVDMNSESERTQDTANVVLDLGPPREPIKWSDLLETVKFMLPTKAWNSLSPDLYATFWGLTLYDLYVPRSRYESEVSKQHAALKALEELSDNSSSAITKRKKDKERIQESLDRLTSRLGRFLYETLKIAYFWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQFIKMIFLFLIVIKFLNTSIFPLYDVAKIKSDEREDLKVLATGVAAALASRKSSWVTDEEFGMGYLELKAAPPVTSKSSANSLAAIQNSSVHNVSQSEPGGGKTAAVGSHHSDSGNLLKDQRSRSGDGKSERTDGVAKSDAGFGKVKSNLSVNGSDSHSAMPSGAVQVATSRVIEYQKPADELNRTVDDNVVKVASKNSMESELRAAGKRSQPAGSLNKAPKQDTAKDDGRSGKASGKLSGSSASDRELLSQASDSRQGGTSNIPPSMTGNGNSITALARGSSSSTRAYDIHGPEPKVEAGATKSFDLRATSAKDDGIDGPDLPRASSRLAQSPRHDSSSNASKSSDKVQKRSSPAEEPDRQIKRRKGENEPRESEGEVRGSDLERFVDADKSGIDEHNAYKATDKNVDRPKDKGNERYDRDYRDRLDRTDKSRGDDTLVEKVRDRSTERYGRERSVERLQERASDRTFERYPEKPKIDRIKDERTKVRYSEVSADKSLIDERFHGQSLPPPPPIPPHLVPQSVSTSRRDEDGDRRFGITRHTQRLSPRHEEKERRRSEESLVVQDDAKRRREEEFREKKREEREGMIMKVEDRERDRDREKANLLKEDMDATAVSKRRKLKREHLPSGEAGEYSPVSAAPPPLGVGVSQSYDARERGDRKGVMMSRGVYLDETGSRIHSKEVASKMTLRDSDQYPL 983
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 31851098 31858895 - BLOR21552 Blo16g00765 71956

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00765 983 MobiDBLite consensus disorder prediction 811 915 - -
Blo16g00765 983 MobiDBLite consensus disorder prediction 401 424 - -
Blo16g00765 983 MobiDBLite consensus disorder prediction 522 575 - -
Blo16g00765 983 PANTHER THO2 PROTEIN 238 291 IPR040007 GO:0000347|GO:0006397|GO:0006406
Blo16g00765 983 Coils Coil 191 211 - -
Blo16g00765 983 MobiDBLite consensus disorder prediction 432 450 - -
Blo16g00765 983 PANTHER THO COMPLEX SUBUNIT 2 312 909 - -
Blo16g00765 983 PANTHER THO COMPLEX SUBUNIT 2 30 238 - -
Blo16g00765 983 Coils Coil 851 871 - -
Blo16g00765 983 Pfam Transcription factor/nuclear export subunit protein 2 168 237 IPR021418 -
Blo16g00765 983 Pfam Transcription factor/nuclear export subunit protein 2 238 294 IPR021418 -
Blo16g00765 983 PANTHER THO COMPLEX SUBUNIT 2 238 291 - -
Blo16g00765 983 MobiDBLite consensus disorder prediction 636 789 - -
Blo16g00765 983 PANTHER THO2 PROTEIN 312 909 IPR040007 GO:0000347|GO:0006397|GO:0006406
Blo16g00765 983 MobiDBLite consensus disorder prediction 484 946 - -
Blo16g00765 983 PANTHER THO2 PROTEIN 30 238 IPR040007 GO:0000347|GO:0006397|GO:0006406
Blo16g00765 983 MobiDBLite consensus disorder prediction 617 635 - -
Blo16g00765 983 MobiDBLite consensus disorder prediction 375 450 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00765 K12879 THOC2; THO complex subunit 2 - qsu:111987545 818.15
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g529 . Blo16g00765 . Bda11g00196 Bpe13g00998 . . . . . . . . . . . Cpe01g01856 . . . . . . . . . . . . . . . . . . . Csa05g01969 . . . . . Bda11g00196 . . . Bma06g01140 . Cmo04g02231 Cmo15g00928 Cma04g02138 Cma15g00890 Car04g02075 Car15g00836 Cpe13g00426 . Bhi12g00962 . . . . . Lcy10g1597 Cla01g00652 Cam01g0681 Cec01g0674 Cco01g0701 Clacu01g0669 Cmu01g0642 Cre09g1863 Lsi09g00705 . Chy09g00805 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005299 1 1 2 1 1 1 2 1 1 1 1 1 3 1 1 3 1 2 2 1 2 1 1 1 1 1 1 2 1 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g00765 Blo_Chr16 FPKM 19.713169 21.514708 16.277239 15.615409 19.215981 14.573649 19.880817 27.646851 28.342955 32.523842