Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00798 ATGGCTTCTCCTTACGAACTAACCCTAGAATGTAAACCCTACACTTATTCCATGCTCCTCAAGTCATTTGCAGACTCGCCACCCGATCAAACGATGCAGAAACTCGAAGACTTCCTCTCCAGCCTTGAAGATGAACGGCTCAAAATCAATGTTTTCAAAAGAGAACTTCCTCTCTGCATGCAGCTTCTAACAAATGCTGTGGAGGCTTCAAGGCTGCAATTACAGGCTTATAGAGCAAACGAAGAGCCAAAGCCAATTCTTGAAGAATTCATTCCTCTAAAACAGCCTGAAATCTCTGAAGACTTACAAAATATCTCAGATAATAAGGCAAATTGGATGACATCTGCTCAGCTATGGAGTCAAGCAAGCAACAACGAAGTAAAACCGGAGTTTTCATCAATGGCGTCTTCTAAAGAACCCAATAACGGCTTCAATGTCAACCCTTCCAAAATCGCTTTAGATAATAAACAGAGAAACGGTGGGGCCTTTCTTCCATTCTCGAAAGATCGAAACCTTCGTCCACCTCTTCCAGAATTAGCTCTCGCACCTGCGGAGGAGAACAATGAGGTTCCGGCGAGAGAAAATTGTAGCAATGTGGGGATTGAACAAGGGAAAGGATCAGGTGGAAGTTCATCGATTGAGCAGATGATTTCTACTTCTTCTGCTGCGAATAATTCTACTGGCTCTCAAAGTCGAAGGAAAGCCAGGAGGTGTTGGTCGCCGGAGTTGCACCGGCGATTTGTTAATGCTCTTCAGATGCTGGGAGGATCTCAAGCTGCTACTCCTAAGCAGATTAGAGAGCTGATGAAGGTAGATGGTTTGACTAACGACGAGGTTAAAAGCCATCTTCAGAAATACAGACTGCATACTAGACGACCCAGTCCAATCCCCCAAGCTGCCGGACCACCGCCGCCACATTTGGTCGTCCTCGGCGGCATCTGGGTGCCACCGGAGTATGCAACTGCCGCCCACAGTGGTGCTGCAGCTCTATATAGCACACACCCGCCGCCGCTTGCACCACCCCACTACTGCACTGCATCCCCGGTGCCACAAGAGTTTTACGCAGCCCCACAGCCGCAGCAGCCACAGATGCACCACCCGATGCACCACCACCAGCTCCATGTCTACAAGGCCACATCGCAGATGCAAAGCTTGCCGGAATCTGACATCAGGGAAGCCGAAGACCAGTCCGAGAGCATTGAAGATGGCAAGTCCGAGAGCAGTAGTTGGAAGGCTGAAAGTGGGGAAAATGGAGGAGAGAGAAAGGGTTTAGCCAAGCTGAGAGAAGATCTCGGAGAGGACAGCAATGGCAGCGAGATTACTCTGAAATTCTGA 1335 48.99 MASPYELTLECKPYTYSMLLKSFADSPPDQTMQKLEDFLSSLEDERLKINVFKRELPLCMQLLTNAVEASRLQLQAYRANEEPKPILEEFIPLKQPEISEDLQNISDNKANWMTSAQLWSQASNNEVKPEFSSMASSKEPNNGFNVNPSKIALDNKQRNGGAFLPFSKDRNLRPPLPELALAPAEENNEVPARENCSNVGIEQGKGSGGSSSIEQMISTSSAANNSTGSQSRRKARRCWSPELHRRFVNALQMLGGSQAATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPIPQAAGPPPPHLVVLGGIWVPPEYATAAHSGAAALYSTHPPPLAPPHYCTASPVPQEFYAAPQPQQPQMHHPMHHHQLHVYKATSQMQSLPESDIREAEDQSESIEDGKSESSSWKAESGENGGERKGLAKLREDLGEDSNGSEITLKF 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 33448564 33450453 + BLOR21585 Blo16g00798 71989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00798 444 MobiDBLite consensus disorder prediction 388 436 - -
Blo16g00798 444 Pfam Myb-like DNA-binding domain 236 287 IPR001005 -
Blo16g00798 444 Gene3D - 233 291 - -
Blo16g00798 444 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 231 291 IPR017930 -
Blo16g00798 444 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 444 - -
Blo16g00798 444 Coils Coil 60 80 - -
Blo16g00798 444 MobiDBLite consensus disorder prediction 378 444 - -
Blo16g00798 444 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 234 289 IPR006447 GO:0003677
Blo16g00798 444 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 444 IPR044787 GO:0003700|GO:0006355
Blo16g00798 444 SUPERFAMILY Homeodomain-like 232 292 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00832 Blo-Chr11:14222147 Blo16g00798 Blo-Chr16:33448564 1.39E-69 dispersed
Blo13g00566 Blo-Chr13:27747155 Blo16g00798 Blo-Chr16:33448564 3.99E-49 dispersed
Blo16g00798 Blo-Chr16:33448564 Blo16g01054 Blo-Chr16:39063120 3.90E-63 dispersed
Blo01g00709 Blo-Chr1:8643988 Blo16g00798 Blo-Chr16:33448564 0 wgd
Blo16g00798 Blo-Chr16:33448564 Blo05g00652 Blo-Chr5:21105555 1.10E-35 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13429 PF00249 Myb_DNA-binding 2.60E-06 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00798 - - rcu:8276198 524.628