Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00829 ATGGCTGCTCGTACTCTGCGTTGTGTCGCCATTGCATATAGATCTTATGATATTGAAAAAATTCCCGCTGATGAAGAACAACTAACTAAGTGGGTGCTACCAGAGAATGAGCTTGTGTTGTTGGCTATTGTTGGTATAAAGGACCCTTGTCGACCTGGAGTGAAACATGCAGTAAAACTTTGTCAAATTGCTGGTGTCAAGGTACGTATGGTAACTGGGGACAACATTCAAACTGCCAAAGCTATTGCTTTAGAATGTGGCATACTTAGTTTAGATGCAGATGCTTCCGAACACAATATTATGGAGGGAAAAGCCTTTCGCGAACTATCTGATGAACAAAGAGAAGAAATTGCTGAAAAGATATCAGTGATGGGACGGTCGTCTCCCAATGATAAACTTCTTCTCGTTCAAGCATTGAGAAAAAAGAGACACGTTGTTGCTGTAACTGGGGATGGAACGAATGATGCACCTGCTTTGCATGAGGCAGACATTGGTCTTGCAATGGGTATTCAAGGGACAGAAGTCGCAAAGGAAAGCTCGGATATTATTATCTTGGATGACAATTTTGCTTCTGTTGTTAAGGTTGTTAGGTGGGGCCGTTCAGTTTATGCGAATATTCAGAAGTTTATTCAGTTTCAGCTTACAGTTAATGTTGCTGCCCTAATTATTAATGTTGTTGCGGCAGTGTCTTCTGGGAATGTTCCACTAAACGCAGTGCAGCTTCTTTGGGTTAATCTTATCATGGATACTTTAGGGGCATTGGCGTTAGCAACTGAACCACCAACAGATCATCTTATGCACAGGCCGCCTGTGGGAAGAAGTGAACCTCTTGTAACAAATATTATGTGGAGAAATTTGCTGATACAGGCTTCGTATCAAGTATCTGTGCTGCTTGTTCTCAACTTTGCGGGTATACATTTACTTAATCTGGAACACAAAACAGTAGAACGTGCTAACGAAGTGAAGAATACTCTGATATTCAATGCGTTTGTCCTTTGTCAGATTTTCAATGAGTTCAACGCTCGGAAGCCGGATGAAACAAATATTTTCAAAGGAATTACCAAAAATTATATCTTCTTGGCGATAGTGGGTCTTACTCTAGTACTTCAGGTTATTATCATTATGTTTCTTGGGAAGTTTACTTCAACTGTCCGGCTTAGCTGGGAACTTTGGTTAGTTTCCATCATTATTGGTTTTATCAGTTGGCCCCTTGCCGTCCTTGGAAAGCTAATACCTGTTCCTGAAACTCCGTGTCATAAATTCTTCACGAAACGGGGCCGAAGAACCATTTTGCTGTGCGTGTTTCAGATTAGCCAGGTGATGGTGGAGCCGAAGTTCACTGACTGCTGCCTATTTTCTGGACTGAGTTGGCAAATGATAGGTTCAAAGATGATATTAAACGTCTCGATTATTGTATCCAGAAGAGTAGATTTTGATTCATTGTCTGAAATGAGAATAGAAGACATGATTGAGAATGCTAGATTAGCGGGATTGTGTAGATTGGGTGGAAGTTACTGTGAGTGGATTGTCAAACTATTTTATGCCAATTTGGAGCTGTCCACCCTGGTTGAGACTGTTGGATTAGCTGGATTGTGTAGATTGAGTGGAAGTTACCGTGAGTGGATTGTCAAACTATTTTATTTTAACTCGGATCTGTTCACCTAA 1665 40.96 MAARTLRCVAIAYRSYDIEKIPADEEQLTKWVLPENELVLLAIVGIKDPCRPGVKHAVKLCQIAGVKVRMVTGDNIQTAKAIALECGILSLDADASEHNIMEGKAFRELSDEQREEIAEKISVMGRSSPNDKLLLVQALRKKRHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGNVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRPPVGRSEPLVTNIMWRNLLIQASYQVSVLLVLNFAGIHLLNLEHKTVERANEVKNTLIFNAFVLCQIFNEFNARKPDETNIFKGITKNYIFLAIVGLTLVLQVIIIMFLGKFTSTVRLSWELWLVSIIIGFISWPLAVLGKLIPVPETPCHKFFTKRGRRTILLCVFQISQVMVEPKFTDCCLFSGLSWQMIGSKMILNVSIIVSRRVDFDSLSEMRIEDMIENARLAGLCRLGGSYCEWIVKLFYANLELSTLVETVGLAGLCRLSGSYREWIVKLFYFNSDLFT 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 34712797 34719814 - BLOR21616 Blo16g00829 72020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00829 554 Pfam Cation transporting ATPase, C-terminus 234 411 IPR006068 -
Blo16g00829 554 PRINTS H+-transporting ATPase (proton pump) signature 149 165 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo16g00829 554 PRINTS H+-transporting ATPase (proton pump) signature 181 206 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo16g00829 554 Pfam haloacid dehalogenase-like hydrolase 39 163 - -
Blo16g00829 554 PANTHER CALCIUM-TRANSPORTING ATPASE 1 431 - -
Blo16g00829 554 Gene3D - 50 194 IPR023214 -
Blo16g00829 554 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 115 231 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo16g00829 554 PANTHER CATION TRANSPORTING ATPASE 1 431 - -
Blo16g00829 554 SUPERFAMILY HAD-like 4 254 IPR036412 -
Blo16g00829 554 Gene3D - 2 49 IPR023299 GO:0000166
Blo16g00829 554 PRINTS P-type cation-transporting ATPase superfamily signature 64 74 - -
Blo16g00829 554 PRINTS P-type cation-transporting ATPase superfamily signature 173 185 - -
Blo16g00829 554 PRINTS P-type cation-transporting ATPase superfamily signature 149 168 - -
Blo16g00829 554 PRINTS P-type cation-transporting ATPase superfamily signature 42 53 - -
Blo16g00829 554 Gene3D - 195 402 - -
Blo16g00829 554 SUPERFAMILY Calcium ATPase, transmembrane domain M 199 413 IPR023298 -
Blo16g00829 554 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 2 413 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00987 Blo-Chr12:27907713 Blo16g00829 Blo-Chr16:34712797 1.03E-141 dispersed
Blo16g00829 Blo-Chr16:34712797 Blo12g00345 Blo-Chr12:19397056 2.39E-164 dispersed
Blo17g00892 Blo-Chr17:29451457 Blo16g00829 Blo-Chr16:34712797 3.40E-56 dispersed
Blo16g00829 Blo-Chr16:34712797 Blo16g00832 Blo-Chr16:34782847 8.69E-12 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00829 K01537 - cpap:110809805 703.36