Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00836 ATGGAGAGACCACTAAAGAGGTTGCTAGAGGGGCTGCTCACTGCCCCATTCTCTACAAACCAGCAATCATCTCATGGTGGCGCTTCTCCACTCGCTCCTCCATTTTTTGCATTTGGAGTAGCCCAATTTGATGATGCTACTCCATTTTTTGCATTTGGAGCAGCCTCATTTGATAGTGCTCTACCATCATATGTATTATATGCAACCCCATTTGATAGAGCTCCTCCATCCGAACAAGTCGGTTCTCCATCGCTTGGACTCGAGCTAACACCTCCTCCGCTTGCTCCTCCATCTTGTGCAACCAGTTGGAAATCTACTAAGGCATTGAAGGTGAGGTTGAGGTTGAGGTTGAGGTTGAGGTTGTGCTTCAATCTCAACTACTATAACAAGGGCAATTGTGGGTCCTCCAACGTCAACTGCGGGTCCTCTAATGTGCTGTTCCAACTTGAACTACAGCTGCTGCATCTTCAACCACAGTATGTTATTATCCATGTTGAAGGTCGTGAAGAGAAAGAACTTGAGAGAAAGGTGGAGCTCTCTGGAGGGTCTGGTTCTCTCGGATCTTCTCAATTCTGTGCAGCTCCCATGGACAACACTTTGGAAGATTACAATCTCTACTGGGAAACAAACACTCTCTTCCAAGCACAAGATATCGACAACAGTTGGGGAGTCGAGGACTTGCTGAATCAGTACTACGACACTAGCTCGTCGGACGGAGCAACTTTATCGCCGGTGGAAGCCTCCAAGAACATTGTCTCCGAGAGGAACAGGAGGAAGAAGCTCAACGACAGGCTCCTAGCACTTAGAGTGGTAGTTCCAAATATCACAAAGATGGACAAGGCTTCTATAATTAAAGATGCAATAAAGTACATAGAAGAACTGCACGAGGAAGAGAAGAAAATGCAGGCGGAGATTATGGAGCTGGAGAATGGGAGAATTAACAGGAGCACTTCATGTGACGCCATTGATGATCATCTGGACGCTCTAGTCTTCTCCAGATCAGTGACAAAGAAGAAGAAGAAGAAGAAAAGTTCACAGTTTCTGGATTCTGATGAAGAAATGAGTTTCCCCATTGAAGTTCTTGAGGCAGAAAAAGAAGAGATTGATAATTTGAAGATGAAAATAGAAGCTGCAATTGCGTCCCACAATAATCATTTACTAAGTTCTTGA 1170 44.87 MERPLKRLLEGLLTAPFSTNQQSSHGGASPLAPPFFAFGVAQFDDATPFFAFGAASFDSALPSYVLYATPFDRAPPSEQVGSPSLGLELTPPPLAPPSCATSWKSTKALKVRLRLRLRLRLCFNLNYYNKGNCGSSNVNCGSSNVLFQLELQLLHLQPQYVIIHVEGREEKELERKVELSGGSGSLGSSQFCAAPMDNTLEDYNLYWETNTLFQAQDIDNSWGVEDLLNQYYDTSSSDGATLSPVEASKNIVSERNRRKKLNDRLLALRVVVPNITKMDKASIIKDAIKYIEELHEEEKKMQAEIMELENGRINRSTSCDAIDDHLDALVFSRSVTKKKKKKKSSQFLDSDEEMSFPIEVLEAEKEEIDNLKMKIEAAIASHNNHLLSS 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 35204972 35214811 - BLOR21623 Blo16g00836 72027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00836 389 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 249 309 IPR036638 GO:0046983
Blo16g00836 389 SMART finulus 251 300 IPR011598 GO:0046983
Blo16g00836 389 Coils Coil 284 311 - -
Blo16g00836 389 Coils Coil 358 381 - -
Blo16g00836 389 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 245 294 IPR011598 GO:0046983
Blo16g00836 389 Pfam Helix-loop-helix DNA-binding domain 252 294 IPR011598 GO:0046983
Blo16g00836 389 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 201 369 - -
Blo16g00836 389 Gene3D - 244 311 IPR036638 GO:0046983
Blo16g00836 389 PANTHER TRANSCRIPTION FACTOR BHLH35 201 369 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo14g00682 Blo16g00836 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00836 Blo-Chr16:35204972 Blo02g00458 Blo-Chr2:6465576 1.68E-30 dispersed
Blo14g00682 Blo-Chr14:15294811 Blo16g00836 Blo-Chr16:35204972 5.66E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13432 PF00010 HLH 8.00E-10 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00836 - - qsu:112012381 161.77