Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00853 ATGTCACTATCCGAAAGAGAACCAATACAGAAAAGTCGCCATGAACAATTTAATCTTTGTCCATTTCTCGTCGGCTATAACGATGAAGAACAAGGGATAGTTGGATATACTTTGCAGGAGCAGAGCTGGTTTTTATTTGCTACTTGCAGAGGAGAAAGGAAGAACATTAATTCAGAATTGTGGCATGCTTGCGCTGGAGCTCTAGTTTCTCTACCTCCAGTTGGGAGCCTTGTGGTTTACTTTCCTCAAGGCCACAGTGAGCAGGTTGCAGCATCGATGCATAAGGAGACTGATTTCGTGCCCAACTATCCAAACCTTCCTTCCAAGTTGATTTGTATGCTTCACAATGTCACTTTACATGCTGATCTCGAAACTGATGAAGTTTATGCACAAATGACCCTTCAGCCTGTTACCAAATATGACAACGAAGCTTTACTGGCATCTGATATAGGCCTCAAGCAAAGCCGACAACCTACTGAGTTCTTCTGCAAAACTCTTACGGCTAGTGACACTAGCACCCATGGTGGATTTTCCGTTCCTCGTCGGGCAGCCGAGAAGATATTTCCACCACTAGATTACACAATGCAACCCCCGGCTCAGGAGCTAGTTGCTAGAGATCTGCACGATACTTCTTGGCCTTTCAGACATATTTATCGCGGCCAACCTAAAAGACATCTGCTGACTACGGGCTGGAGTGTTTTCGTTAGTACAAAACGTCTTTTTGCTGGAGATTCGGTTCTTTTCATAAGAGATGAAAAATCACGGCTTCTTTTAGGCATACGACGGGCTAATAAGCAGCAGCCAGCTCTTTCTTCATCCGTAATTTCTAGTGACAGCATGCACATTGGAATTTTTGCTTCTGCAGCTCATGCAGCCGCAAATAACAGTCCATTTACTATATTTTATAATCCTAGGGCAAGTCCTTCGGAATTTGTAGTTCCTTTGGCCAAATATAATAAAGCAATGTACACCCAAGTTTCCCTTGGCATGCGATTTCGAATGATGTTCGAGACCGAGGAGTTAGGGATACGCAGATACATGGGTACTATCACCGGTATCAGCGACTTGGATCCAGTGCGATGGAAAAGTTCACAATGGCGTAATCTTCAGGTTGGATGGGATGAGTCGGCAGCAGGTGCCAGGCCGACCCGCGTTTCGATATGGGAAGTCGAGCCCGTTATAACGCCTTTCTACATATGCCCGCCTCCATTTTTCCGACCCAAATTGCCCAAACAGCTGGGAATGCCAGATGATGAATCTGAAATCGAGAATGCTTTCAAGAGAGCCATGCCGTGGCTTGGGGACGACTTTAGCGTGAAGGACAGCCAGAGCCCGATTTTTCCAGGTCTAAGTTTGGTGCAGTGGATGAGCATGCAGCAAAATAATCAGTTTCCATCTGCTCAATCTGGGTTTTTACCGTCTATGCTTTCTCCAAACGCCCATTCGCTCCATAACAGTTTAAGCACTGATGATCCATCTAAACTATTGAGTTTTCAAACTCCGGTACTATCTACGCCTACTCCTCCATATAACAATCCTAATCAGCAGGGCCAAGTTATTCAGTTGCAGCAGCCAGCCTCTGCCTGGCCCCAACAGCAACATCCACAGCCACAGCCTCAGCCACAGCAATTACTGCAGATTCCCTCTAGCCAACAGCTACAACGGCCGCAACCTCAGCAATTAGCACATATTCAACCACAACACCAACAAAACAAGCAAATTCTACCACAACAACAGCTGACCCAACAATCTCCTTCAAATAATGGTGTTCTTGCAAGTAACCAGATGCAAAATCAAACTTTGCAGCAGCCATTGCTGTACTCCCAGCTTCAGCAACAGCAGTTGATGGCCGGCAATGACCTAACCCAGCAAAGTCCTCTCCAGTCTCAACAGGCTCCCATAAAGCAGCCCCAACCCCAACCCCAGCCAAAGGGCCATTTCAAGCCGCTCAGTGCCATGAGAACTCAGTCTATGACAGATGGTGATGCTCCATCTTGTTCAACTTCACCTTCCTCCAATTATTCCCATGTTCCAACTTCAAACCTTTTGAACAGAAGGCAAGGACCAGTCACTCAAGCTGAATGTTCAGTAGTCGAGCCTACGAACAACCCACTTCAGGAACTTCAAAGTAAATACGATTCTCGAATCAAACACGAGTTTCCGAGCGAAAAAGGACCAGATCTGATTAAATTGAAAAGCACAATCAGTGATCAGTTAGAAGTATCCTCTTCTGGGACATCATATTGTCTAGATGCCGGGACAATGCAGCAGCCGTTCTCGCTCCCTGTTTGTTTAGACAATGATGCCCAATCCCATCATCGGATGAGCATTCCTTTCACGAGTAACATCGACGGATTGATGCCAGATACTTTGTTATCTAGAGAATTTGACTCCCAAAATTTACTTTCTAACTACAACAGTATTCCGAGAGATATCGAAACGGAGCTGTCTAGCGCTCCTATTAGTCCACATCCATTTGGGGTGCCAAACTTGCCTCTTAAGCCCAGTTGCTCAAATGACGTCCCCATAAACGATTCTGGAGCCATGGGCAGCGGACTGTGGGCGAATCACAATCAACGGACGCGTACATATACGAAGGTTCAAAAGCGTGGATCTGTAGGGAGATGTATCGACGTGACTCGATATAGAGGATATGGAGAGCTAAGGTTTGATCTTGCTCGCATGTTCGGGATTGAAGGGCAGCTTGAAGATCCTCAGAGAACTGATTGGAAGCTCGTTTATGTAGATCATGAAAACGATATACTTCTTGTCGGGGACGATCCGTGGGAAGAGTTTGTGAGCTGTGTTCAGAGCATAAAGATACTTTCGTCGGCCGAAGTACAGAAAATGAGCTTGGATGGAGATTTGGGCCAAATTCAAATTCCAAATCATGCATGTAGCGGGACGGACAGCGAAAACGCGTGGAGAGACGACCAGTCTGCAGCCTCCTTCAATCGATAG 2961 46.1 MSLSEREPIQKSRHEQFNLCPFLVGYNDEEQGIVGYTLQEQSWFLFATCRGERKNINSELWHACAGALVSLPPVGSLVVYFPQGHSEQVAASMHKETDFVPNYPNLPSKLICMLHNVTLHADLETDEVYAQMTLQPVTKYDNEALLASDIGLKQSRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYTMQPPAQELVARDLHDTSWPFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSRLLLGIRRANKQQPALSSSVISSDSMHIGIFASAAHAAANNSPFTIFYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEELGIRRYMGTITGISDLDPVRWKSSQWRNLQVGWDESAAGARPTRVSIWEVEPVITPFYICPPPFFRPKLPKQLGMPDDESEIENAFKRAMPWLGDDFSVKDSQSPIFPGLSLVQWMSMQQNNQFPSAQSGFLPSMLSPNAHSLHNSLSTDDPSKLLSFQTPVLSTPTPPYNNPNQQGQVIQLQQPASAWPQQQHPQPQPQPQQLLQIPSSQQLQRPQPQQLAHIQPQHQQNKQILPQQQLTQQSPSNNGVLASNQMQNQTLQQPLLYSQLQQQQLMAGNDLTQQSPLQSQQAPIKQPQPQPQPKGHFKPLSAMRTQSMTDGDAPSCSTSPSSNYSHVPTSNLLNRRQGPVTQAECSVVEPTNNPLQELQSKYDSRIKHEFPSEKGPDLIKLKSTISDQLEVSSSGTSYCLDAGTMQQPFSLPVCLDNDAQSHHRMSIPFTSNIDGLMPDTLLSREFDSQNLLSNYNSIPRDIETELSSAPISPHPFGVPNLPLKPSCSNDVPINDSGAMGSGLWANHNQRTRTYTKVQKRGSVGRCIDVTRYRGYGELRFDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQKMSLDGDLGQIQIPNHACSGTDSENAWRDDQSAASFNR 986
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 35921520 35930792 - BLOR21640 Blo16g00853 72044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00853 986 CDD B3_DNA 161 262 IPR003340 GO:0003677
Blo16g00853 986 SMART B3_2 162 264 IPR003340 GO:0003677
Blo16g00853 986 SUPERFAMILY DNA-binding pseudobarrel domain 152 291 IPR015300 -
Blo16g00853 986 Pfam Auxin response factor 288 370 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Blo16g00853 986 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 47 504 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo16g00853 986 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 514 976 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo16g00853 986 Pfam AUX/IAA family 859 948 IPR033389 -
Blo16g00853 986 Pfam B3 DNA binding domain 162 263 IPR003340 GO:0003677
Blo16g00853 986 Gene3D - 159 263 IPR015300 -
Blo16g00853 986 ProSiteProfiles PB1 domain profile. 862 955 IPR000270 GO:0005515
Blo16g00853 986 MobiDBLite consensus disorder prediction 967 986 - -
Blo16g00853 986 Gene3D - 325 395 - -
Blo16g00853 986 MobiDBLite consensus disorder prediction 482 573 - -
Blo16g00853 986 MobiDBLite consensus disorder prediction 652 682 - -
Blo16g00853 986 MobiDBLite consensus disorder prediction 482 531 - -
Blo16g00853 986 ProSiteProfiles B3 DNA-binding domain profile. 162 264 IPR003340 GO:0003677
Blo16g00853 986 Gene3D - 857 951 - -
Blo16g00853 986 MobiDBLite consensus disorder prediction 623 682 - -
Blo16g00853 986 PANTHER AUXIN RESPONSE FACTOR 19 47 504 - -
Blo16g00853 986 PANTHER AUXIN RESPONSE FACTOR 19 514 976 - -
Blo16g00853 986 MobiDBLite consensus disorder prediction 538 573 - -
Blo16g00853 986 SUPERFAMILY CAD & PB1 domains 861 940 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00578 Blo16g00853 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00225 Blo-Chr11:1827807 Blo16g00853 Blo-Chr16:35921520 5.35E-24 dispersed
Blo11g00372 Blo-Chr11:3154567 Blo16g00853 Blo-Chr16:35921520 1.20E-30 dispersed
Blo12g00892 Blo-Chr12:27099990 Blo16g00853 Blo-Chr16:35921520 3.66E-32 dispersed
Blo14g00413 Blo-Chr14:4588879 Blo16g00853 Blo-Chr16:35921520 1.58E-91 dispersed
Blo08g00438 Blo-Chr8:8805932 Blo16g00853 Blo-Chr16:35921520 2.49E-58 transposed
Blo16g00290 Blo-Chr16:6964416 Blo16g00853 Blo-Chr16:35921520 8.81E-17 transposed
Blo01g00578 Blo-Chr1:6319798 Blo16g00853 Blo-Chr16:35921520 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13435 PF02309 AUX_IAA 1.40E-08 CL0072 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00853 - K14486 aof:109844334 988.408