Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00870 ATGACATTGGAGAACCAGGCGGATAGATTTTCCGGTGAAAATGATCGATTTCCGGTGGGGCTGCGGGTCCTTGCAGTGGACGACGACGCTTCTTGTCTGAAATTGGTAGAGAATCTTCTACGAAAGTGCCAGTACAATGTAACGACCACCAATCAGCCAATGGAGGCATTGAAAATGTTGAGGGGAAATAAAGACCAGTTTGACATTGTAATTACTGATGTAAACATGCCCGGAATGGATGGTTATAAGCTTCTCGAGCTAATCGGGCTCGAGATGGATCTCCCCGTCATAATGTTGTCGGCGCATAGCGATACAGAGTTTGTAATGAAGGGGATCTATCACGGGGCTTGTGATTATCTTGTGAAACCATGTCGCATGGCCGAGATCAAGAACATATGGCAACATGTTGTCCGGAAAAAGCGTATGGATCCAAAGGGCAAGAACGATAATTCGAATCCAGATGAAGGAGGATTCGTATTGGCCAAAAATTCCGATAATTCAAAAGCAGGTCGAAAGCGAAAGGAGCAAATTGAAGCGGGGGAAGACGAGGGGGACGAAAATGAAAACGAAGATCCTTCAACGCAAAAGAAGCCTAGAGTGGTTTGGTCTGTAGAGCTGCACAGAAAGTTTGTTGCAGCTGTTACTCAATTGACTCTTAAAAAAGCTGTTCCGAAGAAGATTCTTGATCTGATGAATGTCGAAGGACTCACACGAGAAAATGTGGCGAGCCATCTTCAGAAATATAGGCTCTACCTGAAAAGAATTAGTGCTGCAGGAATCCAACAGGAAAATCCAATGCATATAAGTTCGATCGAGGGATTTGGATTGTCAGGATCTCGAATATTTTCTAGCAATCCGCTCTCATCGTATCCACTGGTTGAAGTTCTTGGTAAATTCGACTCTCCTTCGGGATTGAACTCACAGGGGATTGTTTTGCCCAGATTAGTCCAACACAGCACTTCTCGTAACTTGAACGATTCTTTCGATTCGCTGGGAAAATTCCCTCAAAGCCAATCTCCTGATTTGTTTAACGAAATTCCGACATCGTTAGAGCTCACCGACTTGCATCAGGGAAAGTCGTTATATAGAGAGTTTAATCCGATCAACACTGCCAATGGCTTCTCTTATGCATCGAATTTTCAGGATGGCAAAGTGGCTTTGAATAGCTCAATTGATTCTATATCGAGATTGCCGGCCAAACGTATGATTTTAGATGCAAACAATCATGGAGGCATAACCCTGTTGAAATCAGAATCTTTCAAAATCGATGAAAATGTTGCTTTGAATCTTTTGGGTAATGATCAAAGTAGTGGAAATTGGCGGCAAGGAGTTCATTTGTCTCAATTTCCATCGACTGGCTCGTCTGATGCTTGCTATCGTCGAGAAATGCCTTCGAATAGCTCGAGAATATCTTACGAACACTCTCCAATTGCTTTCCCTTCGACAAGTTCAATTCCAAATCCTCTGTTGGATTTGAGGACAGACGAACAATGCCGAGAAGTTCTGATCGGCGTCGTTGCTCCGACCATCGATTTTATGCAAAAGCAGGAGTGGGACGAGCACAAACTATTCGTCAACCATAATCCAAGTCGTTCCGCTATTAATTCTCGGGTTTTAGCTGATGAAGTTATGGATCCACTAAATCGGAGAATGGATCAAAATGGCACAGTTAAAGTGGAAATGTTCGACGTAAGATCGTTGATTGGCCAATCAACCGACAATATTACATCTTTTGGGCAGCACAATGCACTTGAAAGTCTTGTTGGAGAGACAAAGATGAACTTCAATGCAAACAACATCTTAAATATGGCACAAGAAGTATTCATTTCGAGCGATTTTGGTTCATTAGATGATGTGGTAAACGTGGTTTCCAAACAGGAACCGAGGGCGACAATTGACGGAGGATTCTGGATGTGA 1917 43.09 MTLENQADRFSGENDRFPVGLRVLAVDDDASCLKLVENLLRKCQYNVTTTNQPMEALKMLRGNKDQFDIVITDVNMPGMDGYKLLELIGLEMDLPVIMLSAHSDTEFVMKGIYHGACDYLVKPCRMAEIKNIWQHVVRKKRMDPKGKNDNSNPDEGGFVLAKNSDNSKAGRKRKEQIEAGEDEGDENENEDPSTQKKPRVVWSVELHRKFVAAVTQLTLKKAVPKKILDLMNVEGLTRENVASHLQKYRLYLKRISAAGIQQENPMHISSIEGFGLSGSRIFSSNPLSSYPLVEVLGKFDSPSGLNSQGIVLPRLVQHSTSRNLNDSFDSLGKFPQSQSPDLFNEIPTSLELTDLHQGKSLYREFNPINTANGFSYASNFQDGKVALNSSIDSISRLPAKRMILDANNHGGITLLKSESFKIDENVALNLLGNDQSSGNWRQGVHLSQFPSTGSSDACYRREMPSNSSRISYEHSPIAFPSTSSIPNPLLDLRTDEQCREVLIGVVAPTIDFMQKQEWDEHKLFVNHNPSRSAINSRVLADEVMDPLNRRMDQNGTVKVEMFDVRSLIGQSTDNITSFGQHNALESLVGETKMNFNANNILNMAQEVFISSDFGSLDDVVNVVSKQEPRATIDGGFWM 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 36260074 36263231 + BLOR21657 Blo16g00870 72061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00870 638 CDD REC_typeB_ARR-like 23 137 - -
Blo16g00870 638 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 197 250 IPR006447 GO:0003677
Blo16g00870 638 Pfam Response regulator receiver domain 23 131 IPR001789 GO:0000160
Blo16g00870 638 Gene3D - 21 153 - -
Blo16g00870 638 Gene3D - 193 256 - -
Blo16g00870 638 SMART REC_2 21 133 IPR001789 GO:0000160
Blo16g00870 638 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 628 IPR045279 GO:0009736
Blo16g00870 638 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 628 - -
Blo16g00870 638 ProSiteProfiles Response regulatory domain profile. 22 137 IPR001789 GO:0000160
Blo16g00870 638 MobiDBLite consensus disorder prediction 141 196 - -
Blo16g00870 638 SUPERFAMILY CheY-like 20 144 IPR011006 -
Blo16g00870 638 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 194 253 IPR017930 -
Blo16g00870 638 MobiDBLite consensus disorder prediction 166 180 - -
Blo16g00870 638 SUPERFAMILY Homeodomain-like 194 254 IPR009057 -
Blo16g00870 638 PIRSF RR_ARR_type-B 1 634 IPR017053 GO:0003677|GO:0003700|GO:0009736
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo08g00530 Blo16g00870 CCT
Blo08g00530 Blo16g00870 ECH
Blo01g00600 Blo16g00870 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00870 Blo-Chr16:36260074 Blo16g01182 Blo-Chr16:40356446 1.21E-83 dispersed
Blo08g00530 Blo-Chr8:15145143 Blo16g00870 Blo-Chr16:36260074 2.50E-167 transposed
Blo01g00600 Blo-Chr1:6592662 Blo16g00870 Blo-Chr16:36260074 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13436 PF00072 Response_reg 2.40E-25 CL0304 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00870 K14491 - jre:109012904 548.895