Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00873 ATGATGCCCTGGGTTGGTCGGGACTCAGGGCCTCTAAAATTGGCGGGCAACAGCGCAGTCGCCACTACACTAGACCTGAGAGAGACCTCTGCTTCAGATTTCAGTGCTCGGCTTCAGACTTCTTGTTGCCTTAGGGTTAGTTGGGACTCGAGACCTCTTAAATCTGCAGGCAACAGCGCAGTCGCCACTACGCTAGACCCGAGAGAGACCCCAGCTTCAGACTTCAGTGCTCGGCTGCAATTTCACCCGCGACCCCCTCCCCCTCGAAACCCCCTGTCACCATGTCGCCTTGCTCATTACTCTGGTTTTCTTTTCCTCGTTGGTTACTGGGAAAGTGGAAGCTTCCAAGAATCTCTCATTTTTCTACCGACGGAGAAAACGAAGGAAAACACGCAAGCTGCACTCGTGCTTAATGCTTCACGGCGATTTCGATATACTTTAGACTTGAAAAAGGAAGATGAGAAAAGAGAGGCTATAAGGAAGATTAGAGCACATGCACAAGCTATACTTGCTGCCTATCGCTTCAAATTGGCTGGAGATCGTCTAATAGGAGTCGAGCAAGAGCGAAGAACTGGGCATCAAGACGGTAGCTTCCTTTTGGACAGCAGAGTTGTCCGGCGATGGAAAGAAGAGAATGTGCCGGCGCGAAGCTTGTCGGCAGGACACGAGCGAGAAGGACAAGACCGAGAAGGACAGGAAGAAGCTCGCCGCGGAAGTACAACACCCTCAATTCCAACCGGTGTGTACGAAGTAGGAAAAGAGCAACTATCTGTGTTGGTGAAGGATCGTAATCTATCTGCTCTGCAGCAACTTGGAGGGGCAAGTTTATTGGATATCGTGAAAAGTATATCCAATTCATTAAAAACGAACTTGGAGAAAGGTATTCATGGGGATGATGAGGATTTACTAAAAAGGAGAGAAGAATATGGATCAAACACATATCCTCAAAAAAAAGGAAGAAGCTTTTGGAGGTTCCTTTGGGAAGCATGGCAAGATCTCACACTGATAATATTGATAATTGCTGCAGTGGCTTCTTTGGGACTAGGCATAAAGAGTGAGGGTATCAAGGAAGGTTGGTATGACGGTGGAAGCATTTGTTTAGCAGTTATCATTGTCATTGTTGTGACAGCCATTAGTGATTATCGACAATCTTTGCAGTTCCAGAATCTAAATGAGGAGAAGAGAAATATACACTTGGAGGTTATCAGAGGAGGTAGAAGAGTGAAGGTTTCTATATATGATATTGTTGTGGGAGATGTTGTACCTTTGAACATTGGGGATCAGGTTCCTGCTGATGGGATTTTAATATCTGGACACTCTCTTGCAATTGATGAGTCAAGCATGACTGGCGAGAGCAAGATCGTTCATAAACATGCAAAAGAACCGTTTCTGTTATCGGGTTGCAAAGTAGCGGATGGAAGTGGCACTATGCTGGTTACAAGTGTTGGCGTTAATACTGAATGGGGATTGCTGATGGCTAGCATTTCTGACGACACTGGTGAGGAAACACCCTTGCAGGTCCGATTGAATGGGGTTGCTACTTTTATTGGTATTGTGGGACTAACTGTAGCTTTTGCTGTCTTGATTGTTCTATTTGTCAGATATTTTACTGGACACACCACAAATGCAGATGGGCAAGTTCAATTTGTTGCTGGCCGTACAAAGGCTGGCAAGGCCGTTGATGGGGCCATTAAAATCATTACTGTTGCGGTCACAATTGTAGTTGTTGCGGTGCCGGAAGGGCTTCCCTTGGCTGTTACCTTAACGGATATAGGTAGAGTCATAATCTCAGCCTTGATCTTTTCCTTCAATGAAACGAAAAGCAATCTCAATGTTTGTTCTTGTACAACAAAGTTTCTGTACTTTATTGACCTCGTCGTAGCTTCGTCGCACTCCCAGGCTCGCAGCTTCGCACGGCTTCACCTTCCGAGACCTCGTCGCTGCTTCGTCGCGCTCCCAGGCTCGCAGCTTCGCACGACTTCACCTTCCGAGACCTCGTCGCAGCTTCGTCGCACTCCCAGGCTCGCAGCTTCGCACAGCTTCACCTTCAGAATCGGAGACTCAAGGAGGGAGGGTAGGGCTAGGGGAACTTCAGTTCTGGGTATGGAATCGGGGACGGGGAGGGTGGGTACTGGGTAG 2139 47.59 MMPWVGRDSGPLKLAGNSAVATTLDLRETSASDFSARLQTSCCLRVSWDSRPLKSAGNSAVATTLDPRETPASDFSARLQFHPRPPPPRNPLSPCRLAHYSGFLFLVGYWESGSFQESLIFLPTEKTKENTQAALVLNASRRFRYTLDLKKEDEKREAIRKIRAHAQAILAAYRFKLAGDRLIGVEQERRTGHQDGSFLLDSRVVRRWKEENVPARSLSAGHEREGQDREGQEEARRGSTTPSIPTGVYEVGKEQLSVLVKDRNLSALQQLGGASLLDIVKSISNSLKTNLEKGIHGDDEDLLKRREEYGSNTYPQKKGRSFWRFLWEAWQDLTLIILIIAAVASLGLGIKSEGIKEGWYDGGSICLAVIIVIVVTAISDYRQSLQFQNLNEEKRNIHLEVIRGGRRVKVSIYDIVVGDVVPLNIGDQVPADGILISGHSLAIDESSMTGESKIVHKHAKEPFLLSGCKVADGSGTMLVTSVGVNTEWGLLMASISDDTGEETPLQVRLNGVATFIGIVGLTVAFAVLIVLFVRYFTGHTTNADGQVQFVAGRTKAGKAVDGAIKIITVAVTIVVVAVPEGLPLAVTLTDIGRVIISALIFSFNETKSNLNVCSCTTKFLYFIDLVVASSHSQARSFARLHLPRPRRCFVALPGSQLRTTSPSETSSQLRRTPRLAASHSFTFRIGDSRREGRARGTSVLGMESGTGRVGTG 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 36290757 36315280 - BLOR21660 Blo16g00873 72064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00873 712 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 365 535 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo16g00873 712 SMART Cation_ATPase_N_a_2 279 350 IPR004014 -
Blo16g00873 712 Gene3D - 300 496 - -
Blo16g00873 712 PANTHER CALCIUM-TRANSPORTING ATPASE 9, PLASMA MEMBRANE-TYPE 137 589 - -
Blo16g00873 712 MobiDBLite consensus disorder prediction 690 712 - -
Blo16g00873 712 SUPERFAMILY Calcium ATPase, transduction domain A 398 493 IPR008250 -
Blo16g00873 712 Gene3D - 125 177 - -
Blo16g00873 712 Gene3D - 328 589 - -
Blo16g00873 712 SUPERFAMILY Calcium ATPase, transmembrane domain M 283 589 IPR023298 -
Blo16g00873 712 PANTHER CATION TRANSPORTING ATPASE 137 589 - -
Blo16g00873 712 MobiDBLite consensus disorder prediction 215 246 - -
Blo16g00873 712 Pfam Ca2+-ATPase N terminal autoinhibitory domain 131 153 IPR024750 GO:0005516
Blo16g00873 712 MobiDBLite consensus disorder prediction 215 236 - -
Blo16g00873 712 Pfam Cation transporter/ATPase, N-terminus 281 345 IPR004014 -
Blo16g00873 712 Pfam E1-E2 ATPase 398 589 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01021 Blo-Chr3:36514356 Blo16g00873 Blo-Chr16:36290757 1.12E-42 dispersed
Blo13g00011 Blo-Chr13:126399 Blo16g00873 Blo-Chr16:36290757 5.02E-38 dispersed
Blo16g00831 Blo-Chr16:34765635 Blo16g00873 Blo-Chr16:36290757 4.71E-167 dispersed
Blo16g00873 Blo-Chr16:36290757 Blo10g00944 Blo-Chr10:28508262 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00873 K01537 - csv:101211703 588.186