Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00889 ATGGCTCTGCTTCGGCCACAGGCTTCGCCCTCTGCAATTGCTTCCAATTTCTCTTTCAATGGAGGTTTGCTTCAGAAGATTCGCTTCAACATCCATACACCTCGAAACGACCATCTCACCCGGTCTCGCTCCATCTGCAAGGCGTCATGGCAAGAGCTTGCTGGAGTTCTGATATTCTCTGCAATTCCGTTCACGGCTGTGAAAGCCATAGCTAATAGCCCCTTGGGAGAGTCGCTCCAGAGACGATTGGAAGAGAGGAAGAAACTTGCAGTGGAGAACTCTTCCAAGTTCAAGGCCTTAGCCGAGAAGGCTAGGAAAGATAGCTTATGGTATGGAGAGGACCGTCCTCGTTGGCTTGGTCCAATCCCATATCAATATCCAGAATACCTTAGTGGTAAATTTCCAGGAGATTATGGATTTGATGTTGCAGGATTGGGCAAGGATTCTGAAGCCTTTCAAAAGTACTTCAATTTTGAAATACTGCATGCTCGTTGGGCTATGCTGGCTGCACTTGGCGCACTGATTCCAGAGGCATTAGACTTATTAGGAGCCTTTCACTTTGTTGAACCTGTTTGGTGGCGAGTTGGCTATTCAAAACTTAAGGGCGATACACTGGACTACCTCGGTATCCCTGGTCTCCACTTAGCTGGTGGTCAAGGAGTAATTGTCATTGCAATTTGCCAAGCGATTTTGATGGTTGGACCTGAATATGCTAGATATTGTGGCATCAAGGCATTGGAACCGTTAGGAATCTACCTACCGGGTGATATAAATTATCCGGGAGGAGCCTTGTTTGATCCATTAAACCTCTCCAAAGATCCGGTTGCATTCGAGGAGCTGAAAGTGAAAGAGATTAAAAATGGGCGGTTAGCCATGGTAGCCTGGTTAGGATTTTACATTCAAGCTGCTTTGACAGGTAAAGGTCCTATTCAAAACCTCATTGAGCACATTTCTGATCCTTTCCATAGTAATATACTTTCCTTGTTTCAATCCTAG 996 45.68 MALLRPQASPSAIASNFSFNGGLLQKIRFNIHTPRNDHLTRSRSICKASWQELAGVLIFSAIPFTAVKAIANSPLGESLQRRLEERKKLAVENSSKFKALAEKARKDSLWYGEDRPRWLGPIPYQYPEYLSGKFPGDYGFDVAGLGKDSEAFQKYFNFEILHARWAMLAALGALIPEALDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGLHLAGGQGVIVIAICQAILMVGPEYARYCGIKALEPLGIYLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAALTGKGPIQNLIEHISDPFHSNILSLFQS 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 36559425 36562132 - BLOR21676 Blo16g00889 72080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00889 331 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 43 325 IPR001344 GO:0009765|GO:0016020
Blo16g00889 331 Pfam Chlorophyll A-B binding protein 127 302 IPR022796 -
Blo16g00889 331 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC 43 325 - -
Blo16g00889 331 SUPERFAMILY Chlorophyll a-b binding protein 109 329 - -
Blo16g00889 331 Gene3D Chlorophyll a/b binding protein domain 117 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00889 Blo-Chr16:36559425 Blo02g00138 Blo-Chr2:1181364 1.95E-63 transposed
Blo16g00889 Blo-Chr16:36559425 Blo15g00451 Blo-Chr15:6642911 2.43E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00889 K14172 - mnt:21407512 548.125