Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00894 ATGTCCTTCACAATCACTAATGGAGTCAGCACAGAAAGAGACTCTTTCATCGTCCCCTTACTGTCTTCTCAGAGATCCGCCCTTAACTGTTCTTCCCAGGTCGCCATTGTCGGGTCTAAAGTCTGCCCCATCGAAAGCCTCGACTACGAGATTTTTGAGAATGAAATCTTCAAACAGGATTGGAGGAGCCGTCGGAAGTTGCAGATTTTTGAATATACATTTATGAAGTGGCTTTTGTGCTTTCTGATTGGTCTGATCGTTAGCGTTATTGGCTTCTGCAATAATCTCTCTGTCGAGATCATTGCTGGTGAAAAATTGGTCGCCACCTCCAATATGATGCTCAAGAAGAGGTATTGGATGGCGTTTCTTGTTTTTTCAATATCAAATTTAGTTCTCACTCTATTTGCAGCTACGATTACGATATTGATCTCGCCGGCTGCAGCCGGATCCGGTATTCCAGAAGTTAAAGCCTATTTGAACGGCGTTGACGCGCCGAGAATTTTTTCGATAAGAACACTGATAGTGAAGGTGGTTGGCAGCATTTCGGTGGGATCGTCGTCTTTGCTAGTAGGAAAGGCCGGGCCTCTGGTGCATACCGGCGCTTGCGTTGCATCTCTGCTAGGTCAGGGCGGGTCGAGAAAATATCATTTGACATGTAGATTTCTTCGGTATTTCAGGAACGACAGAGACCGGCGCGATCTCATAACGTGCGGGGCAGCTGCCGGAATTGCGGCTGCTTTTCGTGCTCCAGTGGGCGGTTTGCTCTTTGCTTTCGAAGAGATGGTATCTTGGTGGCGGAGTGCCCTTTTGTGGCGGGCGTTTTTCACAACGGCGGTGGTTGCGATTATATTACGATCGTTAATCAATGTTTGCTTAAGTGGAAGATGTGGATTATTTGGAACAGGAGGTTTGATAATGTTTGATGTGTATTCAGAATCTGTAACATATCATCTAGTGGATGTTCCTTCGGTGCTCGCCCTTGGAGTTATCGGAGGGATGCTCGGAAGCTTCTTTAACTTCATTTTAGGCAAAGTTCTTCGACTTTACAGTCTCGTAAACGAGAAAGGCGTTGCTTACAAGTTTCTGCTCGCCACCGCCGTCTCGATTTTCACATCCTGTCTTCTTTTTGCATTACCGTGGGTCGGAACTTGCAAGCCTTGCCCGACGACCACATCGGAAGAGTGTCCGACAATCGGACGGTCAGGAAAATACAAAAAATTTCAATGTTCGGCCGATCACTACAACGATCTCGCAAGTCTCATATTCAACACCAGCGACGACGCGATTAAAAATCTCTTCAGCAAAGATTCCGGCACGGAGTTTCAATACTCGTCGATCATCATATTTTTCATCACCTGCTATTGCTTAAGCATTATCAGCTATGGAGTTGTTGCTCCGATCGGTCTGTTTATCCCCGTTATCGTTACCGGAGCTTCCTACGGGCGTTTGGTCGGGATGTTAGTGGGTTCGCGCACGAAGCTCGACCACGGGCTTTTCGCCGTACTTGGAGCGGCCTCGTTGCTCGGAGGTACGATGAGAATGACGGTTTCTCTCTCCGTCATCATCCTCGAACTAACCAACAATCTCTTATTGCTTCCTTTGATAATGGTGGTTTCTTTAGTCTCCAAAACCGTCGCCGATGCGTTCAATAGCAATATCTACGACCAAATCATGAAAGCCAAAGGGTTTCCATATCTCGAGTCCCATGCCGAGCCGTACATGCGGCAGCTGACGGTTGGCGACGTCGTCATGGGTCCGCTTCAGATATTTCAAGGGATCGAGAAAGTGAGTAACATCGTACATGTTCTTCGAATGACAAGACATCATGGTTTTCCGGTCGTCGACGAGCCTCCTTTCTCCGATTCCCCTGTTCTATTCGGAATTGTTCTTCGAGCCCATTTGATCACGTTGTTGAAGAAGAAAGCTTTCTTACCGACGACTGTGCCGATCGATATTAGTGCCTATACGCAATTAACAGCCGGAGATTTCGCGAAGAGGGGCTCGAATAACACAGAGGATATCGAGGACGTTGAATTGACAGAGGAAGAGATGGGGATGTTCGTCGATCTCCATTTGTTTAGTAACGCTTCGCCTTATACGGTTGTGGAAACGATGTCATTAGCGAAAGCTCTGGTTCTTTTCCGGCAAGTTGGATTGAGACATATGCTCGTCATTCCAAAAATTTCCGGCAGCGCCGGTCGTGGGTATATTAACCCGGCACGATTTCATGTCGGAACACATACTGGGTTTGTATCCTTCGCTCGTGAAAAGCAGGTGGAAGAGACTCAGAATCCAGATTCCGCAGTTGCGTAG 2313 47.34 MSFTITNGVSTERDSFIVPLLSSQRSALNCSSQVAIVGSKVCPIESLDYEIFENEIFKQDWRSRRKLQIFEYTFMKWLLCFLIGLIVSVIGFCNNLSVEIIAGEKLVATSNMMLKKRYWMAFLVFSISNLVLTLFAATITILISPAAAGSGIPEVKAYLNGVDAPRIFSIRTLIVKVVGSISVGSSSLLVGKAGPLVHTGACVASLLGQGGSRKYHLTCRFLRYFRNDRDRRDLITCGAAAGIAAAFRAPVGGLLFAFEEMVSWWRSALLWRAFFTTAVVAIILRSLINVCLSGRCGLFGTGGLIMFDVYSESVTYHLVDVPSVLALGVIGGMLGSFFNFILGKVLRLYSLVNEKGVAYKFLLATAVSIFTSCLLFALPWVGTCKPCPTTTSEECPTIGRSGKYKKFQCSADHYNDLASLIFNTSDDAIKNLFSKDSGTEFQYSSIIIFFITCYCLSIISYGVVAPIGLFIPVIVTGASYGRLVGMLVGSRTKLDHGLFAVLGAASLLGGTMRMTVSLSVIILELTNNLLLLPLIMVVSLVSKTVADAFNSNIYDQIMKAKGFPYLESHAEPYMRQLTVGDVVMGPLQIFQGIEKVSNIVHVLRMTRHHGFPVVDEPPFSDSPVLFGIVLRAHLITLLKKKAFLPTTVPIDISAYTQLTAGDFAKRGSNNTEDIEDVELTEEEMGMFVDLHLFSNASPYTVVETMSLAKALVLFRQVGLRHMLVIPKISGSAGRGYINPARFHVGTHTGFVSFAREKQVEETQNPDSAVA 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 36620751 36623826 - BLOR21681 Blo16g00894 72085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00894 770 Pfam Voltage gated chloride channel 133 547 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo16g00894 770 SUPERFAMILY Clc chloride channel 54 569 IPR014743 -
Blo16g00894 770 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 11 730 - -
Blo16g00894 770 Gene3D - 568 728 IPR046342 -
Blo16g00894 770 CDD CBS_pair_voltage-gated_CLC_euk_bac 569 727 - -
Blo16g00894 770 SUPERFAMILY CBS-domain pair 569 727 IPR046342 -
Blo16g00894 770 Gene3D Clc chloride channel 68 567 - -
Blo16g00894 770 PANTHER CHLORIDE CHANNEL PROTEIN 11 730 - -
Blo16g00894 770 PRINTS Chloride channel signature 553 567 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo16g00894 770 PRINTS Chloride channel signature 515 534 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo16g00894 770 PRINTS Chloride channel signature 176 195 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo16g00894 770 PRINTS Chloride channel signature 465 485 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo16g00894 770 PRINTS Chloride channel signature 240 259 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo16g00894 770 PRINTS Chloride channel signature 497 513 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo16g00894 770 PRINTS Chloride channel signature 145 162 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo16g00894 770 PRINTS Plant CLC chloride channel signature 275 285 IPR002251 GO:0005247|GO:0006821|GO:0016020
Blo16g00894 770 PRINTS Plant CLC chloride channel signature 293 300 IPR002251 GO:0005247|GO:0006821|GO:0016020
Blo16g00894 770 PRINTS Plant CLC chloride channel signature 50 58 IPR002251 GO:0005247|GO:0006821|GO:0016020
Blo16g00894 770 PRINTS Plant CLC chloride channel signature 417 433 IPR002251 GO:0005247|GO:0006821|GO:0016020
Blo16g00894 770 PRINTS Plant CLC chloride channel signature 261 269 IPR002251 GO:0005247|GO:0006821|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00614 Blo-Chr1:6780429 Blo16g00894 Blo-Chr16:36620751 0 dispersed
Blo03g00284 Blo-Chr3:5732060 Blo16g00894 Blo-Chr16:36620751 0 dispersed
Blo11g00622 Blo-Chr11:6347279 Blo16g00894 Blo-Chr16:36620751 0 dispersed
Blo12g00322 Blo-Chr12:18725555 Blo16g00894 Blo-Chr16:36620751 0 dispersed
Blo16g00894 Blo-Chr16:36620751 Blo02g01193 Blo-Chr2:43656855 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00894 K05016 - pop:18099916 1082.01