Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00898 ATGACGAGCTGCGTCAATGTTGCACCTGAGCAACTTTGCTACATACCCTGCAATTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCTGCAATATGTTTGACATTGTCACCGTCCTATGTGGTCACTGCACAAATCTCTGGTCTGTGAACATGGCATCTGCATTTCAGTCACTTTCATGGCAAGATCCCCAGGCTCAAATTTACTCCTACAATCCACCCTACCATTATCGAATCGACTCAGGTTCCTCGTCCAAATGCAACAACAAGATGACACTTCGTCCTCCAACCAAAAACTCAAATTCAGCTGAGAGGCTTGTGAATCGAACTCCCGAGAAGAGGCAGAGGGTTCCTACTGCATATAATCAGTTCATAAAGGAAGAAATTCAGAGGATCAAGGCCAATAAGCCAGATATTACACACAGGGAAGCATTTACCACTGCTGCAAAAAATTGGGCACACTTCCCTCATATTCAGTATTCACTTTGGTCAGATGCTAGAAACAAACAACCTGGCCAAGGCTGA 525 44.38 MTSCVNVAPEQLCYIPCNFCNIVLAVSVPCCNMFDIVTVLCGHCTNLWSVNMASAFQSLSWQDPQAQIYSYNPPYHYRIDSGSSSKCNNKMTLRPPTKNSNSAERLVNRTPEKRQRVPTAYNQFIKEEIQRIKANKPDITHREAFTTAAKNWAHFPHIQYSLWSDARNKQPGQG 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 36804288 36806471 + BLOR21685 Blo16g00898 72089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00898 174 MobiDBLite consensus disorder prediction 93 115 - -
Blo16g00898 174 PANTHER AXIAL REGULATOR YABBY 5 1 169 - -
Blo16g00898 174 Pfam YABBY protein 8 162 IPR006780 GO:0007275
Blo16g00898 174 Gene3D High mobility group box domain 107 170 IPR036910 -
Blo16g00898 174 SUPERFAMILY HMG-box 104 157 IPR036910 -
Blo16g00898 174 PANTHER PROTEIN YABBY 6-RELATED 1 169 IPR006780 GO:0007275
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo14g00771 Blo-Chr14:23660301 Blo16g00898 Blo-Chr16:36804288 7.48E-81 dispersed
Blo16g00898 Blo-Chr16:36804288 Blo16g01078 Blo-Chr16:39331050 1.71E-31 dispersed
Blo01g00625 Blo-Chr1:6967807 Blo16g00898 Blo-Chr16:36804288 1.21E-104 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13438 PF04690 YABBY 1.70E-62 CL0114 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00898 K25796 - mnt:21395565 262.692