Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00915 ATGGAAGCCAGCGCAGGCCTCGTTGCTGGCTCGCACAACCGGAACGAGCTCGTCGTCATTCACGGCCACGATGAGGTAAAACCGAAGCCGTTGAGGAATTTGGACGGTCAGGTTTGCGAAATATGTGGAGATGAAGTGGGGATTACGGTGGACGGAGATCTGTTCGTCGCCTGTAATGAATGTGGTTTTCCTGTTTGTCGGCCTTGTTACGAGTATGAGAGAAGAGAAGGGAGCCAGCTCTGTCCGCAGTGCAAAACTAGATATAAGCGTCTCAAAGGGAGTCCGAGAGTTCAAGGAGATGAAGACGAAGAGGATGTGGATGATATTGAGCATGAATTCAACATTGAGCATGAGAAGAACAAGCACAAACATCTTGCAGAAGCTATGCTTCATGGAAAGATGAGCTATGGAAGAGGTCCGGAAGAAGATGACAGCCCTCAATTACATCAGGTGAGTGGTGAGCTCGCTATATCATCTCATGGCCATGGAGATCAAATGTTGTCATCTTCCCTGCATAAACGAGTGCATCCATATCCTGCTTCTGAACCTGGAAGCGAGAGATGGGACGAGAAGAAAGATGAAGGGTGGAAAGAGAGAATGGATGACTGGAAATTACAACAAGGCAATCTGGGGCCTGAGCCTGATGATGACCCTGACATGGCCATGATTGATGAAGCAAGGCAGCCACTTTCAAGGAAAGTACCAATAGCGTCAAGCAAAGTAAATCCTTATCGGATGATCATTGTGGCTCGGCTTGTTATTCTCGCCTTCTTTCTTCGTTACAGGATTTTAAACCCTGTGCATGATGCATTTGGGCTCTGGTTGACTTCTGTGATATGCGAAATCTGGTTTGCTTTCTCATGGATTCTCGATCAGTTTCCCAAATGGTTTCCAATCGATCGTGAGACTTATCTCGATCGCCTTTCTCTCAGGTATGAACGAGAGGGCGAACCTAACATGCTTGCACCTGTGGATATCTTTGTTAGTACTGTGGATCCATTGAAGGAACCTCCTCTTGTTACAGCTAATACAGTTCTTTCAATCTTAGCCATGGACTACCCAGTAGACAAAATTTCATGTTACATTTCTGATGATGGAGCTTCTATGCTCACCTTTGAAGCCATGTCATTAACAGCAGAATTTGCGCGCAAATGGGTACCCTTCTGTAAAAAATTTTCCATAGAACCTCGAGCCCCTGAAATGTATTTCTCAGAGAAGATGGATTACCTCAAAGATAAAGTCCAGCCTACATTCGTTAAAGAACGTCGAGCAATGAAGAGAGAGTATGAGGAATTCAAAGTTAGAACAAATGCTCTCGTGGCGAAAGCCATGAAAGTTCCTCCAGAAGGATGGATTATGCAAGATGGAATTCCATGGCCTGGAAATAACACCAAGGATCACCCTGGTATGATTCAAGTTTTTCTTGGTCATAGTGGAGGACTCGATGCCGAAGGAAATGAGCTTCCTCGCCTTGTTTATGTTTCTCGTGAAAAAAGGCCTGGTTTCCAGCATCACAAGAAAGCCGGAGCCATGAACGCATTAATTCGTGTCTCTGCAGTCCTTACAAATGCTCCTTTTATGTTGAATTTGGATTGTGATCATTACATAAACAACAGCAAGGCAGTGAGAGAAGGCATGTGTTTTCTAATGGATTCTCAAATCGGAAAGAAGGTTTGCTATGTGCAATTCCCACAACGATTCGACGGAATCGATAGGCATGATCGTTATGCCAATAGAAACACAGTCTTCTTTGATATTAACATGAAAGGTCTAGATGGAATTCAAGGTCCTGTATATGTGGGCACTGGATGTGTTTTCAGAAGGCAAGCTTTATATGGATATGAACCTCCAAAGAGGCCAAAGCGCCCAAAGATGATAAGTTGCGATTGTTGTCCATGTTTTGGACGTCGCAAGAAGCTGAGCAACTATTCTAAGCATACAGATGGCGATGCAGGAGCAGGAATCGAAGATGACAAGGAATTATTGATGTCCCAAATGAACTTTGAGAAGAAATTTGGGCAGTCAGCAATTTTTGTCACGTCTACTTTAATGGAAGAAGGTGGTGTTCCTCCTTCCTCAAGTCCAGCATCACTGCTTAAAGAGGCAATCCATGTCATCAGTTGCGGCTATGAAGACAAAACAGAATGGGGGATTGAGCTTGGTTGGATTTATGGATCTATCACAGAGGATATCTTAACTGGGTTTAAGATGCATTGTCGCGGATGGAGATCAATATATTGCATGCCTAAAAGGGCTGCTTTTAAGGGAACAGCTCCAATCAACTTGTCTGATAGACTAAACCAGGTGCTTCGTTGGGCTCTTGGCTCCATTGAAATCTTCTTCAGTCGCCATTGTCCTGTTTGGTATGGCTATAAAGGAGGAAAGCTCAAGTGGCTTGAGAGATTTGCTTATGTTAATACAACTGTGTATCCCTTCACATCAATCCCTCTCCTTGCCTACTGCATCCTCCCTGCCATTTGCCTGCTCACGGATAAATTCATCATGCCTCCGATAAGCACATTTGCAAGCCTCTTCTTCATAGCTCTGTTCCTCTCCATCTTCGCAACGGGGATTCTTGAGCTCAGATGGAGCGGAGTGAGCATAGAAGAATGGTGGAGAAATGAGCAATTCTGGGTGATAGGTGGTGTCTCAGCTCATCTCTTTGCAGTCATTCAAGGCCTGCTAAAGGTTTTGGGTGGAATCGACACAAATTTCACGGTTACATCAAAAGCAGCCGACGACGAAGATTTCGGAGAATTATACACATTCAAATGGACAACTCTTTTGATTCCTCCAACAACAATCTTAATCATCAATCTTGTAGGAGTTGTAGCTGGTATTTCAGATGCCATAAACAATGGATATCAATCTTGGGGGCCTCTATTTGGAAAACTCTTCTTTTCCTTCTGGGTAATTATTCATCTCTACCCCTTCCTTAAAGGTCTAATGGGTCGGCAAAACCGGACTCCGACGATCGTTGTTATATGGTCAGTTCTCCTGGCTTCCATCTTCTCTTTGCTTTGGGTTAGGATTGATCCTTTTGTGCTGAAAACAAGAGGCCCTGATGTGAAGCAGTGTGGAATTAATTGCTGA 3093 44.2 MEASAGLVAGSHNRNELVVIHGHDEVKPKPLRNLDGQVCEICGDEVGITVDGDLFVACNECGFPVCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVQGDEDEEDVDDIEHEFNIEHEKNKHKHLAEAMLHGKMSYGRGPEEDDSPQLHQVSGELAISSHGHGDQMLSSSLHKRVHPYPASEPGSERWDEKKDEGWKERMDDWKLQQGNLGPEPDDDPDMAMIDEARQPLSRKVPIASSKVNPYRMIIVARLVILAFFLRYRILNPVHDAFGLWLTSVICEIWFAFSWILDQFPKWFPIDRETYLDRLSLRYEREGEPNMLAPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYISDDGASMLTFEAMSLTAEFARKWVPFCKKFSIEPRAPEMYFSEKMDYLKDKVQPTFVKERRAMKREYEEFKVRTNALVAKAMKVPPEGWIMQDGIPWPGNNTKDHPGMIQVFLGHSGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREGMCFLMDSQIGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYEPPKRPKRPKMISCDCCPCFGRRKKLSNYSKHTDGDAGAGIEDDKELLMSQMNFEKKFGQSAIFVTSTLMEEGGVPPSSSPASLLKEAIHVISCGYEDKTEWGIELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSRHCPVWYGYKGGKLKWLERFAYVNTTVYPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFIALFLSIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLGGIDTNFTVTSKAADDEDFGELYTFKWTTLLIPPTTILIINLVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIIHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTRGPDVKQCGINC 1030
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 37045354 37049830 - BLOR21702 Blo16g00915 72106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00915 1030 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 111 IPR013083 -
Blo16g00915 1030 SUPERFAMILY Nucleotide-diphospho-sugar transferases 338 853 IPR029044 -
Blo16g00915 1030 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 18 1030 - -
Blo16g00915 1030 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Blo16g00915 1030 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 461 615 IPR029044 -
Blo16g00915 1030 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] 18 1030 - -
Blo16g00915 1030 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Blo16g00915 1030 Pfam Cellulose synthase 324 1024 IPR005150 GO:0016020|GO:0016760|GO:0030244
Blo16g00915 1030 Pfam Zinc-binding RING-finger 29 106 IPR027934 -
Blo16g00915 1030 SUPERFAMILY RING/U-box 24 111 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00503 Blo-Chr3:18701914 Blo16g00915 Blo-Chr16:37045354 7.07E-130 dispersed
Blo07g00870 Blo-Chr7:27269452 Blo16g00915 Blo-Chr16:37045354 1.97E-114 dispersed
Blo11g00268 Blo-Chr11:2164342 Blo16g00915 Blo-Chr16:37045354 0 dispersed
Blo12g00580 Blo-Chr12:24105551 Blo16g00915 Blo-Chr16:37045354 0 dispersed
Blo16g00489 Blo-Chr16:19519994 Blo16g00915 Blo-Chr16:37045354 0 dispersed
Blo16g00514 Blo-Chr16:20825520 Blo16g00915 Blo-Chr16:37045354 0 dispersed
Blo16g00915 Blo-Chr16:37045354 Blo12g01081 Blo-Chr12:28512601 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00915 K10999 - csv:101214842 1953.72