Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00952 ATGGCCGCCGTTCGCCTCCTCTTCCTCCTCTTCTTCTCTCTCCTCCCTCTCTCTCTCTCCCTTTCTGAAATCCAGGCCCTTCTCAAGCTCAAGGAATCGTTCAACAATTCAGACGCTTTAAATTCTTGGAATTCCGATTCATCTCCTTGCTCTGCAAAATGGACTGGTATCATTTGTAACAATGGCATTATTACCGGCCTTCATCTTTCCGATTTGAGACTTTCCGGCGAGATTGATATCGATTCTATTCGCGAGATTCGTGGTCTTCGAACCGTCAGTTTGGTCAACAACAGTTTCTCCGGGCCGATTCCAGAATTTAACAGAGTCGGCGCTTTGAAGGCTCTTCTGCTCACCAGCAATGAATTCTCCGGTGAAATTCATAAAGATTTCTTCGCCAACTTAACGTCGTTGAAGAAAGTCTGGTTCGCTGGCAACAATTTCTCCGGCCCCATCCCCGATTCGCTCGGGCAATTATCTCATTTAATAGAGCTCCATCTCGAAAGCAACCAATTCTCGGGGGAAATTCCGGACCTGAAACAAAAAACCATAACCTCTCTGGATCTATCGGACAACAAGCTAGAAGGAGAAATCCCCAGCAGCCTCTCCAGATTCAATTCTAAATCATTCGAGAAAAACGACGGTCTCTGCGGGAAACCGCTAAACAAGACGTGCGGCGAGAAGCAGAAACCAGTAACGTCGCCGCCGGCGATGGCGAAACCTTCCCCTGAGAAAGAATCCAATGTTAGTCACGTTGTGTTAGTGACAATGATCGCCATATTCCTCGTCTTCCTGGCCTATCTCGCCGTCAGTTCGTCAAGACGCCGAGACCAAGATTTCAGCGTACTGGGGAAAGAAAACGCGACCGATGTGGTCGAAGTTCATTTACCAACTTCTCACCTCAAATCGAAAGAGTCGAGCCGGAGAGGGGACTCGAAGAGAGGGTCTCAGCATGGCCGGAACGGGATGGGAGATTTGGTGGTGGTCAATAGCGAGAAGGGACCGTTTGGGTTGGCCGATTTGATGAAGGCGGCGGCGGAGGTGCTTGGAAACGGCGGCTTGGGCTCTGCGTACAAGGCCGTGATGTCGAACGGGTTGTCGGTGGTGGTGAAGAGGATGAGAGAGGTAAATAGGATCGGGAAAGAAGGGTTTGACGTTGAGATGAGGAGGTTTGGACGGCTGCGTCACCGGAATATATTGACGCCGTTGGCTTACCATTACCGGAGAGAGGAGAAGCTCCTGGTTTCTGAATATGTTCCAAAAGGCAGCTTGTTATACGTCTTGCATGGTGACCGTGGAGTTTGTCATTCAGAGCTGAGTTGGCCGATCCGACTGAAGATAATCAAAGGGATAGCTCAAGGAATGGGTTTCATTCACTCGGAATATTCAACCTACGATCTCCCCCATGGAAATCTGAAATCCAGCAACGTCCTTCTCGGCGAAGAATACGAACCTCTCCTGAACGACTACGCCCTTCATCCGCTAATCAACCCCTCCAACGCCGCACAAGCAATGTTCGCTTACAAATCGCCGGAATACGCACAGTACCAGGAAATTTCCCCGAAATCCGACGTCTACTGCCTCGGCATCATCATTCTCGAAATACTCACAGGAAAATTCCCGTCGCTGTATCTCAGCCACGGCAAGGGAGGAACCGACGTGGTTCAGTGGACATCATCGGCGTTGTCAGAGAAGAGAGAGGTTGAAGCGATAGATCCGGAAATCGCCGGCGACGGAGATCCACAGTCGGTTGATCAGATGGTGGATCTCCTCCGGATCGGAGCTTCGTGCACAGAGAGTAGTCCTCATCAACGGCCGGAAATGAGGGAAGCCATTAGGATGATAGAAGAGATACAAGTTTAG 1860 50.22 MAAVRLLFLLFFSLLPLSLSLSEIQALLKLKESFNNSDALNSWNSDSSPCSAKWTGIICNNGIITGLHLSDLRLSGEIDIDSIREIRGLRTVSLVNNSFSGPIPEFNRVGALKALLLTSNEFSGEIHKDFFANLTSLKKVWFAGNNFSGPIPDSLGQLSHLIELHLESNQFSGEIPDLKQKTITSLDLSDNKLEGEIPSSLSRFNSKSFEKNDGLCGKPLNKTCGEKQKPVTSPPAMAKPSPEKESNVSHVVLVTMIAIFLVFLAYLAVSSSRRRDQDFSVLGKENATDVVEVHLPTSHLKSKESSRRGDSKRGSQHGRNGMGDLVVVNSEKGPFGLADLMKAAAEVLGNGGLGSAYKAVMSNGLSVVVKRMREVNRIGKEGFDVEMRRFGRLRHRNILTPLAYHYRREEKLLVSEYVPKGSLLYVLHGDRGVCHSELSWPIRLKIIKGIAQGMGFIHSEYSTYDLPHGNLKSSNVLLGEEYEPLLNDYALHPLINPSNAAQAMFAYKSPEYAQYQEISPKSDVYCLGIIILEILTGKFPSLYLSHGKGGTDVVQWTSSALSEKREVEAIDPEIAGDGDPQSVDQMVDLLRIGASCTESSPHQRPEMREAIRMIEEIQV 619
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 37796534 37798681 + BLOR21739 Blo16g00952 72143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00952 619 Gene3D Ribonuclease Inhibitor 181 227 IPR032675 -
Blo16g00952 619 MobiDBLite consensus disorder prediction 220 245 - -
Blo16g00952 619 Gene3D Ribonuclease Inhibitor 21 180 IPR032675 -
Blo16g00952 619 SUPERFAMILY L domain-like 42 203 - -
Blo16g00952 619 CDD STKc_IRAK 348 617 - -
Blo16g00952 619 MobiDBLite consensus disorder prediction 295 323 - -
Blo16g00952 619 SUPERFAMILY Protein kinase-like (PK-like) 346 616 IPR011009 -
Blo16g00952 619 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 619 - -
Blo16g00952 619 Pfam Protein kinase domain 346 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00952 619 Pfam Leucine rich repeat N-terminal domain 22 60 IPR013210 -
Blo16g00952 619 Gene3D Transferase(Phosphotransferase) domain 1 418 619 - -
Blo16g00952 619 MobiDBLite consensus disorder prediction 296 317 - -
Blo16g00952 619 Gene3D Phosphorylase Kinase; domain 1 312 417 - -
Blo16g00952 619 ProSiteProfiles Protein kinase domain profile. 342 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g00952 619 PANTHER LRR RECEPTOR-LIKE KINASE 5 619 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00575 Blo16g00952 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00931 Blo-Chr10:28402779 Blo16g00952 Blo-Chr16:37796534 9.90E-148 dispersed
Blo14g00709 Blo-Chr14:17075424 Blo16g00952 Blo-Chr16:37796534 2.85E-150 dispersed
Blo16g00797 Blo-Chr16:33342916 Blo16g00952 Blo-Chr16:37796534 3.55E-109 dispersed
Blo16g00952 Blo-Chr16:37796534 Blo17g00870 Blo-Chr17:28585387 7.03E-81 dispersed
Blo01g00575 Blo-Chr1:6294180 Blo16g00952 Blo-Chr16:37796534 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84763 PF00069 Pkinase 2.00E-25 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00952 - - cmo:103498999 848.195