Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo16g00972 | ATGGTGTTCTTGAAATCCGAAATCGACAAGAATCAAGGTCAAATAGGGTCCCACATGATGAGAATGTCACCCATGAGAGTCCCCCTTCCACTTGGTCTCGCCAAAGACGAGCCCATCTACGTGAATGCAAAACAATACCACGGAATCCTGAGGAGGAGACAATATCGTGCAAAGCTCGAGGCTCAAAACAAAGTCGTAAAAAATCGTAAGCCGTATCTTCACGAGTCCCGGCATGTTCACGCATTGAATCGGATCAACTGTGCGATCCCGGTTAGGCCCTCTCTCTCTATCTCTCTACAATTTCCCTTCACTTCTTTTTGTAGGTATTCAGCAATCCACTTTGCAAACATTGCAGAGAAGGAAAACCTTTGCCTTTATGGACTTCCTAATGAGCAGTGGGAAGTTAATTTGCCAGCTGAAGAAGTGCCCCCTGAGCTGCCGGAGCCTGCATTAGGTATTAACTTTGCTAGAGATGGGATGGAAGAGAAAGACTGGTTGTCCCTGGTTGCTGTTCACAGTGATGCTTGGTTACTTTCAGTGGCTTTCTATTTTGGTTCCAGATTTGGTTTTGATAAAACTGACAGGACACGTCTGTTCTCTATGATAAATGATCTACCCACAATATTTGAGATAGTGACTGGAAGTGAGAAGAAACAAGGAAAGGAGAAGTCATCAATTTCAAATCATAGCAGTAATAAATCTAAGTCAGGCTCAAAAGGGAGAGGCTATGAATCCGGCAATATACCAAAGGAGGTGTCCAAAGAAGAGGATGAAGAATTTGAAGAAGAAGAAGAAGGGGAGGATGACCACGGAGATACCTCATGCGGGGCTTGCGGAGAGAATTACGCATCGGACCAGTTCTGGATTTGCTGTGACATTTGTGAGAAGTGGTTTCATGGTAAGTGCGTGAAGATAACACCGGCAAGAGCCGAGCACATCAAACAATATAAGTGCCCTTCGTGCAGCAATAAGAGAGGTCGACACTGA | 987 | 44.88 | MVFLKSEIDKNQGQIGSHMMRMSPMRVPLPLGLAKDEPIYVNAKQYHGILRRRQYRAKLEAQNKVVKNRKPYLHESRHVHALNRINCAIPVRPSLSISLQFPFTSFCRYSAIHFANIAEKENLCLYGLPNEQWEVNLPAEEVPPELPEPALGINFARDGMEEKDWLSLVAVHSDAWLLSVAFYFGSRFGFDKTDRTRLFSMINDLPTIFEIVTGSEKKQGKEKSSISNHSSNKSKSGSKGRGYESGNIPKEVSKEEDEEFEEEEEGEDDHGDTSCGACGENYASDQFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRGRH | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 37967267 | 37974766 | - | BLOR21759 | Blo16g00972 | 72163 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo16g00972 | 328 | MobiDBLite | consensus disorder prediction | 225 | 241 | - | - | |
Blo16g00972 | 328 | MobiDBLite | consensus disorder prediction | 255 | 270 | - | - | |
Blo16g00972 | 328 | CDD | PHD_AL_plant | 275 | 324 | IPR044104 | - | |
Blo16g00972 | 328 | MobiDBLite | consensus disorder prediction | 219 | 273 | - | - | |
Blo16g00972 | 328 | PRINTS | CCAAT-binding transcription factor subunit B signature | 69 | 92 | IPR001289 | GO:0003700|GO:0006355 | |
Blo16g00972 | 328 | PRINTS | CCAAT-binding transcription factor subunit B signature | 38 | 60 | IPR001289 | GO:0003700|GO:0006355 | |
Blo16g00972 | 328 | ProSiteProfiles | Zinc finger PHD-type profile. | 272 | 324 | IPR019787 | - | |
Blo16g00972 | 328 | ProSiteProfiles | NF-YA/HAP2 family profile. | 35 | 97 | IPR001289 | GO:0003700|GO:0006355 | |
Blo16g00972 | 328 | Gene3D | - | 35 | 87 | - | - | |
Blo16g00972 | 328 | ProSitePatterns | NF-YA/HAP2 subunit signature. | 40 | 60 | IPR018362 | GO:0003677|GO:0016602 | |
Blo16g00972 | 328 | Pfam | PHD-finger | 275 | 324 | IPR019787 | - | |
Blo16g00972 | 328 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 265 | 323 | IPR013083 | - | |
Blo16g00972 | 328 | SMART | cbf3 | 34 | 89 | IPR001289 | GO:0003700|GO:0006355 | |
Blo16g00972 | 328 | SMART | PHD_3 | 274 | 322 | IPR001965 | - | |
Blo16g00972 | 328 | PANTHER | PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1 | 118 | 327 | - | - | |
Blo16g00972 | 328 | SUPERFAMILY | FYVE/PHD zinc finger | 263 | 326 | IPR011011 | - | |
Blo16g00972 | 328 | Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B | 37 | 85 | IPR001289 | GO:0003700|GO:0006355 | |
Blo16g00972 | 328 | PANTHER | CPG BINDING PROTEIN | 118 | 327 | IPR045104 | GO:0006355|GO:0042393 | |
Blo16g00972 | 328 | ProSitePatterns | Zinc finger PHD-type signature. | 275 | 321 | IPR019786 | - | |
Blo16g00972 | 328 | Pfam | Alfin | 119 | 213 | IPR021998 | GO:0006355|GO:0042393 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo14g00448 | Blo-Chr14:5297558 | Blo16g00972 | Blo-Chr16:37967267 | 8.77E-21 | dispersed | |
Blo16g00972 | Blo-Chr16:37967267 | Blo17g00276 | Blo-Chr17:2903439 | 1.11E-96 | dispersed | |
Blo01g00565 | Blo-Chr1:6216102 | Blo16g00972 | Blo-Chr16:37967267 | 4.02E-103 | wgd | |
Blo14g00563 | Blo-Chr14:8484159 | Blo16g00972 | Blo-Chr16:37967267 | 2.30E-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13446 | PF12165 | Alfin | 1.40E-49 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo16g00972 | - | - | zju:107424111 | 328.176 |