Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo16g01025 | ATGGGGGAAGGAGAGGCGGGTGATTCTGTTCCAGAAAATTATCAGCCAGATGTTGCGGCATCAAGTGACGCTGCTTCGTCAGATATCCCAGCTAAGAAGCTCGCGAGGCAGCTGGATTTTACGGGCATTGGAAGGATGTCAGCGAGTGTGGTCTTGCCGGAACATCCCCACTCTCAATCTCAAACACAATTGCAGTCGCGCTCTCAGTTGCCAGCTGTAGCAATGCCTCAGAGCCAGGCTCAATTGCCACCGCCGCCTCAGTCACAGCCACAAATGGTGGTTATACCCGTATCTCCATCTCCAAGGGTTGCAAAACCAGATTCCCCAAAGTCAAGAGCAAGATCCAACATCGAAGCAAAAGATTGTACTCCGAAGAAGCAAAAACAGTGTAATTGTAAACACTCTCGCTGCTTAAAGTTGTATTGTGAGTGCTTTGCATCTGGAATATACTGCGATGGTTGTAACTGCATAAACTGCTATAATAATGTTGAAAATGAAGCTGCCAGGCGCGAAGCAGTTGAATCCATTTTGGAACGTAATCCAAATGCATTTCGACCAAAAATTGCTAGCAGTCCGCATGGGACACGTGATAATAGGGAGGAGGCTGGGGAGGTTCTAATGTTGGGAAAGCACAACAAAGGCTGCCATTGCAAGAAATCAGGGTGCCTAAAAAAGTATTGTGAGTGTTTCCAGGCCAATATTCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAAAACTTTGAGGAAAGTGAAGAGAGGCAAGCTCTATTCCATGGGGACCATGGGAACAATATTGCATACATACAGCAGGCAGCTAATGCTGCTATAACTGGAGCTATTGGATCCTCTGGATATGCATCAACTCCAGTGTCAAGGAAAAGAAAAGGACAAGAGCTTCTTTTTGGCCACACACCCAAAGATCCAGCCATTCATCGGCTAGCACAATTTCAACAGGAAAATCAAATTAGAACTTCTACAGCTTCCTTTCCTTCAATCCCTGCTACTCGTGCAGGTTCCAATGCAGCATTGGGCCCTTCAAAGTTCACTTACAGATCGTTGTTAGCAGACATCATCCAACCACAGGATTTGAAGGAGCTTTGCTCTGTGTTAGTCGTTCTATCTAGTGAAACTGCCAAGACACTTGCAGATCAAAGGAATGCTGCAGAAAGAGGGGCCGACTATCAAATAGAAACTTCCCTTGCTTCCTCAACTCATGACAGGCTGCAGAATGAAAAGGATTCTGCTGAGAAAGCTATCAATGGTGATTGTTCAAGCGCAAACCAGGATAATATAATCAACCCCGACAATTCCAATTCAGAAGAAGCGAATGTACCAAAAGGCCGGCCTATGTCTCCCGGAACTTTAGCTTTGATGTGCGATGAAAAAGACACAATGTTTATAGAATCTGCTTCCCCCAATGGGATAGTTGGCAATAGCTGCTCTACATCATCACAAATGCCTTACGAACAAGATCTGTTGGAAGTCTACGCCGAACAGGAACAGATTGTCTTGACAAAGTTTCGAGATTGTCTCGACAGGCTCATAACTTTCGGAAAGATAAAAGGCAAGTTAATCATTTCTGATCTTGATAAATTAACTATTGAACTTTAG | 1614 | 44.55 | MGEGEAGDSVPENYQPDVAASSDAASSDIPAKKLARQLDFTGIGRMSASVVLPEHPHSQSQTQLQSRSQLPAVAMPQSQAQLPPPPQSQPQMVVIPVSPSPRVAKPDSPKSRARSNIEAKDCTPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCINCYNNVENEAARREAVESILERNPNAFRPKIASSPHGTRDNREEAGEVLMLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEESEERQALFHGDHGNNIAYIQQAANAAITGAIGSSGYASTPVSRKRKGQELLFGHTPKDPAIHRLAQFQQENQIRTSTASFPSIPATRAGSNAALGPSKFTYRSLLADIIQPQDLKELCSVLVVLSSETAKTLADQRNAAERGADYQIETSLASSTHDRLQNEKDSAEKAINGDCSSANQDNIINPDNSNSEEANVPKGRPMSPGTLALMCDEKDTMFIESASPNGIVGNSCSTSSQMPYEQDLLEVYAEQEQIVLTKFRDCLDRLITFGKIKGKLIISDLDKLTIEL | 537 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 38605507 | 38610179 | + | BLOR21812 | Blo16g01025 | 72216 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo16g01025 | 537 | PANTHER | PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 | 75 | 524 | - | - | |
| Blo16g01025 | 537 | PANTHER | PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 | 25 | 91 | - | - | |
| Blo16g01025 | 537 | Coils | Coil | 537 | 537 | - | - | |
| Blo16g01025 | 537 | MobiDBLite | consensus disorder prediction | 421 | 445 | - | - | |
| Blo16g01025 | 537 | MobiDBLite | consensus disorder prediction | 53 | 76 | - | - | |
| Blo16g01025 | 537 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Blo16g01025 | 537 | Pfam | Tesmin/TSO1-like CXC domain, cysteine-rich domain | 213 | 247 | IPR005172 | - | |
| Blo16g01025 | 537 | Pfam | Tesmin/TSO1-like CXC domain, cysteine-rich domain | 127 | 162 | IPR005172 | - | |
| Blo16g01025 | 537 | MobiDBLite | consensus disorder prediction | 402 | 452 | - | - | |
| Blo16g01025 | 537 | SMART | CXC_2 | 125 | 165 | IPR033467 | - | |
| Blo16g01025 | 537 | SMART | CXC_2 | 210 | 251 | IPR033467 | - | |
| Blo16g01025 | 537 | PANTHER | TESMIN/TSO1-RELATED | 75 | 524 | IPR028307 | - | |
| Blo16g01025 | 537 | PANTHER | TESMIN/TSO1-RELATED | 25 | 91 | IPR028307 | - | |
| Blo16g01025 | 537 | ProSiteProfiles | CRC domain profile. | 126 | 250 | IPR005172 | - | |
| Blo16g01025 | 537 | MobiDBLite | consensus disorder prediction | 78 | 92 | - | - | |
| Blo16g01025 | 537 | MobiDBLite | consensus disorder prediction | 49 | 119 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Blo01g00513 | Blo16g01025 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo07g00229 | Blo-Chr7:2846780 | Blo16g01025 | Blo-Chr16:38605507 | 3.25E-27 | dispersed | |
| Blo12g00335 | Blo-Chr12:19105306 | Blo16g01025 | Blo-Chr16:38605507 | 2.54E-24 | dispersed | |
| Blo16g00722 | Blo-Chr16:28037524 | Blo16g01025 | Blo-Chr16:38605507 | 1.33E-06 | dispersed | |
| Blo01g00513 | Blo-Chr1:5647790 | Blo16g01025 | Blo-Chr16:38605507 | 0 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 13450 | PF03638 | TCR | 2.80E-12 | No_clan | Blo | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo16g01025 | - | - | zju:107431760 | 722.62 |