Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01026 ATGGGCAGCTTCACTGCGTTAGAGAATTCTACCCTTTATGTTCAAGGAATAGCTCCGTTCGCCATTAATGGATTCTCTGATGAAAACCCTCCCAACGCAGTTCATTTTGATCTTCCAATGTCTTCAGAATCTGCTTCTAGTTTCGTTGGAAATGGACTGGGAGGAAGAAAGAGAAGAAGAGAAGATCAACAAAGAGAGAATGAAGGGAAGACGAGAGAAGTAGTTCATGTACGAGCGAAACGAGGCCAAGCTACTGATAATCACAGTTTGGCTGAAAGGATAAGACGAGAGAAAATAAATCAGAGGTTGAAATGCTTACAAGACCTAGTTCCAGGATGTTACAAGGCGATGGGAATGGCAGTCATGTTGGATGTTATAATAAGTTATATCCAATCTCTGCAGAATCAAATCGAGTTTCTTTCGTCGAAGCTTTCTGCTGCAAGTAGGTACTACGATTTCAACAGCTCCTCAGATGCTGATCCCGCAGAGACACTCCAGGGGACAAATGGGTATGAAATGCAAGAGATGGAGAGGGTAGCTGCAGGAGAAGGCCATGACCCTAGCTTGCGTAAAGCGCGATCGTTTCATTTCAAGAAAATGTTCGAACTTCCAGGAAGACAAGTTCAAAGTCTAATCCTCGAAAGTGGACATGATAGCCCCAGCCCAAGAATGGCCGGAGAAATTCCCAGCGATCACCGGCGAATTGGTCTGTCACTGAATAGTGATGAAGATAAAGTCCTATGCTTGGCCGGAAACATTGAAACAAAACCAAACCCCCAAAGCAGACGCATCTCAGACATGGAAATGATGAAGGAAAGGTTTGCTAGGCTTCTGTTGGGTGAAGATATGTCCGGCGGAGGAAAAGGAGTTTCTTCTGCATTGGCACTGTCAAATGCCATAACAAATCTTGCAGCTTCTGTGTTTTCGGAGAAAAAGCTGGAGCCAGTGCCTGCAGAGAAGAAACAAAAATGGAGGAAAGAAATGGACTGGTTTTTATCCGTAACAGATCACATCGTCGAGTTCGTCCCTTCAGAGCAGAAATCAAAGGATGGAACATCCATGGAGATTATGGTGACTCGAAAAAGAACCGATCTGCTCGTAAATGTTCCTGCCCTACGCAAGCTTGATGCCATGCTAATTGACTGTTTAGATCAATTTGGGAACAAAAATGAATTCTGGTACGAAGAATCTGATGGAGAAAACGAGCAAAGAGATGGAAACAAATGGTGGTTACCAGAAGTTAGAATTCCGGAAAATGGGTTGTCGGAAGTTGCTCGGAAATGGCTGCAATTCCAGAAGGATTCAGTCAACCAAGTATTGAAGGCAACCATGGCTATAAATGCTCAGGTTCTGGCAGAAATGGAGATCCCAGAAAACTACATTGAATCTCTTCCAAAGAATGGAAGAGCTTGCCTGGGAGATGCAGTATATAAAAGCATCACAGACGAATACTTTGATCCCGAGCAATTCCTCTCGAACTTGGATTTATCGACAGAGCACAAGATTCTGAACCTGAAAAATCGAATTGAAGCCTCCATTGTAATATGGAAAAGGAAGATGTACCAAAAGGATGGAAAGTCCACCTGGGGTTCTTCAGTGAGTCTGGAGAAAAGAGAACTTTTTGAAGAGAGGGCAGAAACCATTCTGCTTCTACTTAAACAGAAATTTCCTGGAATACCACAATCTGCACTAGAGATCAGTAAAATCCAATATAACAAGGATGTGGGATACTCGATTTTAGAGAGCAATTCAAGGGTAATAGAAAGCTTAGCATTCAGTATATTGTCTGGAATAGAGGATGTGCTTGATGCTGATTCTCTCACTGATCAAGACTCATCAGCAGAAAACTCCACCCATATGCTTTGCATGGAGTCATCCCCAAAAGCAATTGCCATGGAAGACGACGCCGAGAAGCTGGGTACAACAGAGACGAAAACCCTGTCAGATTTCATGGGTTGGACATTAAATGAGGAAGATGCTCATGCGAAGAACTCCATGGGAAAATGCTTCAAAGAAGGAAATGAGAAGCTTTTGTGCCAGCCTGCTATCAAGAAACTTTCCTACTTGGAGAAGCTTGAGAGTTTGAGTGGTTTAAGAAGTCCAATATCTCGCCACTAG 2118 43.25 MGSFTALENSTLYVQGIAPFAINGFSDENPPNAVHFDLPMSSESASSFVGNGLGGRKRRREDQQRENEGKTREVVHVRAKRGQATDNHSLAERIRREKINQRLKCLQDLVPGCYKAMGMAVMLDVIISYIQSLQNQIEFLSSKLSAASRYYDFNSSSDADPAETLQGTNGYEMQEMERVAAGEGHDPSLRKARSFHFKKMFELPGRQVQSLILESGHDSPSPRMAGEIPSDHRRIGLSLNSDEDKVLCLAGNIETKPNPQSRRISDMEMMKERFARLLLGEDMSGGGKGVSSALALSNAITNLAASVFSEKKLEPVPAEKKQKWRKEMDWFLSVTDHIVEFVPSEQKSKDGTSMEIMVTRKRTDLLVNVPALRKLDAMLIDCLDQFGNKNEFWYEESDGENEQRDGNKWWLPEVRIPENGLSEVARKWLQFQKDSVNQVLKATMAINAQVLAEMEIPENYIESLPKNGRACLGDAVYKSITDEYFDPEQFLSNLDLSTEHKILNLKNRIEASIVIWKRKMYQKDGKSTWGSSVSLEKRELFEERAETILLLLKQKFPGIPQSALEISKIQYNKDVGYSILESNSRVIESLAFSILSGIEDVLDADSLTDQDSSAENSTHMLCMESSPKAIAMEDDAEKLGTTETKTLSDFMGWTLNEEDAHAKNSMGKCFKEGNEKLLCQPAIKKLSYLEKLESLSGLRSPISRH 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 38619352 38626084 - BLOR21813 Blo16g01026 72217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01026 705 MobiDBLite consensus disorder prediction 54 71 - -
Blo16g01026 705 Gene3D - 80 152 IPR036638 GO:0046983
Blo16g01026 705 SMART finulus 89 139 IPR011598 GO:0046983
Blo16g01026 705 Coils Coil 130 150 - -
Blo16g01026 705 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 187 705 IPR038937 GO:0005085
Blo16g01026 705 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 265 609 IPR005512 GO:0005085
Blo16g01026 705 Gene3D PRONE domain, subdomain 1 271 607 - -
Blo16g01026 705 ProSiteProfiles PRONE domain profile. 257 615 IPR005512 GO:0005085
Blo16g01026 705 Pfam Helix-loop-helix DNA-binding domain 87 134 IPR011598 GO:0046983
Blo16g01026 705 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 10 187 705 - -
Blo16g01026 705 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 151 IPR036638 GO:0046983
Blo16g01026 705 MobiDBLite consensus disorder prediction 45 71 - -
Blo16g01026 705 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 83 133 IPR011598 GO:0046983
Blo16g01026 705 Gene3D PRONE domain, subdomain 2 455 571 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00512 Blo16g01026 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00754 Blo-Chr7:24503953 Blo16g01026 Blo-Chr16:38619352 0 dispersed
Blo13g00169 Blo-Chr13:5996705 Blo16g01026 Blo-Chr16:38619352 1.42E-40 dispersed
Blo13g00874 Blo-Chr13:31297082 Blo16g01026 Blo-Chr16:38619352 2.58E-124 dispersed
Blo15g00068 Blo-Chr15:571507 Blo16g01026 Blo-Chr16:38619352 1.84E-32 dispersed
Blo15g00395 Blo-Chr15:5536755 Blo16g01026 Blo-Chr16:38619352 4.60E-118 dispersed
Blo01g00512 Blo-Chr1:5644416 Blo16g01026 Blo-Chr16:38619352 0 wgd
Blo16g01026 Blo-Chr16:38619352 Blo05g00090 Blo-Chr5:859162 0 wgd
Blo16g01026 Blo-Chr16:38619352 Blo06g00694 Blo-Chr6:30067018 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13451 PF03759 PRONE 1.90E-162 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01026 - - qsu:112015052 644.81