Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01044 ATGGTCACTGAGGAAGAACCTAGCTTTGCCATTCCTCAGCCATGTCCTAGCCTTCCGGTTTCTGACGGCGGCCTATTCGAAGTTCAGACAGAATCATTAACCTCTGCAAGTAACGATGTTTCTTCCTACTCTGAAGATCCATTTCCTCACCACCCTCTCTATCTTTCTGACAGATTTTCCACTCTTAGCCATTCTTTACGCCCTGTAACCCTGAAGTTTAAGAATGTGGAGTACAGTATTAAGTTACCAACGAAGAAAGGTGGCTGTCTAAAATCAAATGATCCAAAATTAACTCGAAATATACTCAATGGCGTGAGCGGAATCGTTAGGCCTGGTGAGCTTTTAGCAATGTTGGGCACTTCGGGAAGTGGAAAGACGACCCTCTTGACCGCCCTCGCCGGCCGCCATTTGCCGGGGAAGATCTCCGGCGAAATAGTCTACAACGGAAAGCCATTCTCCACCTCGATAAAACGTAACACAGGTTTTGTCACCCAAAATGACGTGCTTTATCCTCATCTCACGGTGCTTGAGACCTTAAAATATGCTGCCATTTTGAAGTTACCAAAAGAACTTACAAAATCAGAGAAGGTCGAACAGGCTGAGATGATAATAATGGAATTAGGGTTAACACAATGTCGTGACAGTGTGATTGGTGGAGGACTGTTACGAGGCATTTCAGGAGGTGAGCGTAAAAGGGTAAGTATAGGGCATGAGATGATTTTAAATCCTAGCCTCTTGCTCCTTGACGAACCGACTTCAGGGCTAGACTCGACCACGGCTCAGCGGATAGTCAAAAGGCTGAGAAGGCTGGCTCAAGGTGGTCGGACTGTGGTGACGACAATTCACCAGCCGCCGAGCAGGCTGTATAGAATGTTTGACAAGGTGGTGGTGCTGTCGGACGGCTGTCTTATTTATAGTGGACGTGCAGATGAGGTTGTGGACTATTTTGGGTCCATTGGTTATGAGCTAGGTTTCACTCACATGAATCCTGCTGATTTTCTGCTTGACCTAGCGAATGGCATAGCACCAAATGCAAAACAGGGTGATGAGCTTGATTTCAATGGGAGCTTAGAAAATGATGGCCCTCGAAGTTTAATCAAGCAGTCCCTTATATCATCCTACAAGGAGAATCTCTATCCTCGGCTGAAGGCGGAGATGGAATCAGATTGTAAATACTCAGCCATATCAAAATCAGAAGAATCACCACGTTGTGCGAATCAGTGGAGCACTCGCTGGTTGGAGGAATTTATGGTGTTGCTAAGGAGGGGTCTAAAAGAGAGGAGACATGAATCTTACTCCACTTTAAGGATCGTCCAAGTGATGTCAGTTTCTATTCTTTGTGGACTTTTATGGTGGCAATCTACCACTTCTCACTTACAAGATCAGGTTGGACTTCTTTTCTTCTTCTCCATATTCTGGGGTTACTTTCCTTTCTTCAATGCCATATTTGCCTTTCCATTAGAGCAGCCAATGCTGATCAAAGAACGTTCTGCTGGAATGTACCGTCTCTCCTCCTACTTCTTTGCTAGAACTGCCGGAGACTTGCCAATGGAGCTCATCCTTCCGATCATTTTCACCAGCATTACATATTGGATGGGAGGTCTCAAACAATCATTTCTTACATTTGTACAAACCATCTTCGTCATCCTCTTCAACGTATTAGTTTCACAAGGTGTAGGCCTAGCGCTTGGAGCTATTTTAATGGACCTGAAACAGGCCACAACCCTAGCTTCAGTCACCATGTTGGTGTTCTTACTTGCAGGTGGATATTATATTCAACACATCCCACTTTTTATAGCCTGGTTAAAGTACATTTCCTTCAGCCATTACTGCTACAGGCTTCTTGTTGGAGTTCAATACTCAGCTACCGAGGTTTATGAATGTGGGTGGGGAGAATTTTGTAAGGTAATGGATTTCCCTGCCATTAAATATCTAGGTCTTGATAATATTTGGTTGGATTTGTGTGCTTTGAGTCTTATGCTGGTGGGCTATAGGGTTTTGGCCTATTTAGCGTTGAAGATGGGACAGCCTCATTGA 2037 44.62 MVTEEEPSFAIPQPCPSLPVSDGGLFEVQTESLTSASNDVSSYSEDPFPHHPLYLSDRFSTLSHSLRPVTLKFKNVEYSIKLPTKKGGCLKSNDPKLTRNILNGVSGIVRPGELLAMLGTSGSGKTTLLTALAGRHLPGKISGEIVYNGKPFSTSIKRNTGFVTQNDVLYPHLTVLETLKYAAILKLPKELTKSEKVEQAEMIIMELGLTQCRDSVIGGGLLRGISGGERKRVSIGHEMILNPSLLLLDEPTSGLDSTTAQRIVKRLRRLAQGGRTVVTTIHQPPSRLYRMFDKVVVLSDGCLIYSGRADEVVDYFGSIGYELGFTHMNPADFLLDLANGIAPNAKQGDELDFNGSLENDGPRSLIKQSLISSYKENLYPRLKAEMESDCKYSAISKSEESPRCANQWSTRWLEEFMVLLRRGLKERRHESYSTLRIVQVMSVSILCGLLWWQSTTSHLQDQVGLLFFFSIFWGYFPFFNAIFAFPLEQPMLIKERSAGMYRLSSYFFARTAGDLPMELILPIIFTSITYWMGGLKQSFLTFVQTIFVILFNVLVSQGVGLALGAILMDLKQATTLASVTMLVFLLAGGYYIQHIPLFIAWLKYISFSHYCYRLLVGVQYSATEVYECGWGEFCKVMDFPAIKYLGLDNIWLDLCALSLMLVGYRVLAYLALKMGQPH 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 38888401 38891186 - BLOR21831 Blo16g01044 72235

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01044 678 Pfam ABC-2 type transporter 282 345 IPR043926 GO:0140359
Blo16g01044 678 Pfam ABC-2 type transporter 415 620 IPR013525 GO:0016020|GO:0140359
Blo16g01044 678 Pfam ABC transporter 102 253 IPR003439 GO:0005524
Blo16g01044 678 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 71 325 IPR003439 GO:0005524
Blo16g01044 678 Gene3D - 71 319 IPR027417 -
Blo16g01044 678 CDD ABCG_EPDR 68 307 - -
Blo16g01044 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 321 IPR027417 -
Blo16g01044 678 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 53 675 - -
Blo16g01044 678 SMART AAA_5 111 302 IPR003593 -
Blo16g01044 678 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 53 675 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01044 K05681 ABCG2, CD338; ATP-binding cassette, subfamily G (WHITE), member 2 - pvy:116132157 925.235
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01706 Blo-Chr1:56824745 Blo16g01044 Blo-Chr16:38888401 0 dispersed
Blo03g00268 Blo-Chr3:5565729 Blo16g01044 Blo-Chr16:38888401 0 dispersed
Blo05g00084 Blo-Chr5:816226 Blo16g01044 Blo-Chr16:38888401 3.98E-09 dispersed
Blo06g00960 Blo-Chr6:32839093 Blo16g01044 Blo-Chr16:38888401 0 dispersed
Blo10g00777 Blo-Chr10:24239233 Blo16g01044 Blo-Chr16:38888401 0 dispersed
Blo12g00799 Blo-Chr12:26384034 Blo16g01044 Blo-Chr16:38888401 0 dispersed
Blo16g00556 Blo-Chr16:22851211 Blo16g01044 Blo-Chr16:38888401 1.39E-70 dispersed
Blo16g01044 Blo-Chr16:38888401 Blo07g00944 Blo-Chr7:28708043 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g240 . Blo16g01044 . . Bpe13g01320 . . . Cmo04g01619 . . . Car04g01598 . . . Cpe01g01375 . . . . . . . . . . . . . . Cone13ag0868 . Cone6ag0480 . . . . . . . . . . . . Bma06g00780 . . . . Cma15g01421 . . Cpe13g00026 . Bhi12g01423 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001139 3 3 3 3 3 2 2 2 2 2 2 2 4 2 2 4 2 5 4 2 2 2 2 3 3 1 3 3 3 3 79
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g01044 Blo_Chr16 FPKM 89.189186 110.818466 65.161507 69.041199 65.687561 72.809265 72.785683 66.734818 72.888718 74.190086