Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01050 ATGCAAGGGTTTCAAGAGCAGTATCTAATTCAACATCATCAGCAGATTCTTCAACAGCAAGATCAAGAAAATAGTGATATATATGGAGGAAGGGGATTGATTTTCCCTGAAGTTTCACCAGTTTTACAGCCATGGTCGCTGCCTCAAGTTCATCCCTTCAACCCTACTCAGTTATGCCCGAACCCGGTTCGGGATCTCGACCCATTTCTATCCCCTCCTTCAAACCCTTACGTTAGTTTTTTCAATCGAAGAGCTCCTTCTCTTCAGTTTGCATATGAAGTTCCGTCCTCAGATCACATGAGAATCATTTCAAACTCCCTTGGACAACCGGTTCAACCCGGTTCGGGACCTTTTGGTCTGCAAGCTGAACTGGGGAAGATGACTGCTCAAGAAATAATGGATGCCAAGGCTCTTGCTGCTTCTAAAAGCCATAGTGAAGCTGAGAGAAGAAGACGAGAGAGAATCAACAACCATCTTGCTAAATTGCGCAGCTTACTACCCAACACCACTAAAACAGATAAAGCTTCATTACTAGCAGAAGTAATACAACACGTCAAAGAACTTAAAAGGCAGACTTCCGTGATAGCAGAAGCAAATCCAGTTCCGACGGAAATGGACGAACTTACAGTCGATGCGTCTGACGAAGATGGTAAATTTATGATCAAAGCCTCTCTTTGTTGTGAGGATCGATCTGATCTTTTGCCTGATCTTATAAAAACGTTAAAATCATTGCGTTTAAAAACAATGAAAGCTGAAATTACAACGCTTGGGGGAAGAGTGAAGAACGTGTTGTTCGTCACCGGAGAAGAAGATTCAGGAAACGCCGGCGAGCAAACACAACAGCAGTACTGTATAAGTTCTATTCAAGAAGCTCTCAAGGCAGTGATGGAGAAGACGAGTGGAGATCATCACGAGTCTACTTCTGGAAATGTTAAGAGACAAAGAACAAACAATATTAGCATCCTTTAA 969 42.62 MQGFQEQYLIQHHQQILQQQDQENSDIYGGRGLIFPEVSPVLQPWSLPQVHPFNPTQLCPNPVRDLDPFLSPPSNPYVSFFNRRAPSLQFAYEVPSSDHMRIISNSLGQPVQPGSGPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSVIAEANPVPTEMDELTVDASDEDGKFMIKASLCCEDRSDLLPDLIKTLKSLRLKTMKAEITTLGGRVKNVLFVTGEEDSGNAGEQTQQQYCISSIQEALKAVMEKTSGDHHESTSGNVKRQRTNNISIL 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 38996030 38997808 + BLOR21837 Blo16g01050 72241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01050 322 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 196 IPR036638 GO:0046983
Blo16g01050 322 PANTHER TRANSCRIPTION FACTOR BHLH30 58 322 - -
Blo16g01050 322 CDD bHLH_AtAIG1_like 134 212 - -
Blo16g01050 322 MobiDBLite consensus disorder prediction 297 322 - -
Blo16g01050 322 PANTHER TRANSCRIPTION FACTOR BHLH30 58 322 IPR045847 GO:0003700|GO:0006355
Blo16g01050 322 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 188 IPR011598 GO:0046983
Blo16g01050 322 Pfam Helix-loop-helix DNA-binding domain 142 188 IPR011598 GO:0046983
Blo16g01050 322 Gene3D - 134 195 IPR036638 GO:0046983
Blo16g01050 322 SMART finulus 145 194 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00481 Blo16g01050 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00953 Blo-Chr6:32757026 Blo16g01050 Blo-Chr16:38996030 8.46E-129 dispersed
Blo12g00557 Blo-Chr12:23600040 Blo16g01050 Blo-Chr16:38996030 1.01E-43 dispersed
Blo13g00854 Blo-Chr13:31146952 Blo16g01050 Blo-Chr16:38996030 1.41E-35 dispersed
Blo16g01050 Blo-Chr16:38996030 Blo12g00220 Blo-Chr12:14407904 7.63E-11 dispersed
Blo17g00097 Blo-Chr17:753235 Blo16g01050 Blo-Chr16:38996030 3.69E-37 transposed
Blo01g00481 Blo-Chr1:5281712 Blo16g01050 Blo-Chr16:38996030 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13456 PF00010 HLH 2.10E-12 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01050 - - jre:108993280 463.381