Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01051 ATGGCAGCTGGAAGGACAGGTGCCGAACAGAAACAACGAATCTTAGTCGTCGGAGCGACAGGTTTCATCGGCCAGTTTCTCGCCGACGCAAGCTTAGAGGCTGGAAAGGAAACCTTCATCCTCGTTCGAACCATCTCCGTCTGCTCTTCAAAGAGCGCGGCCATGGATTCTTTCCGAGAAAGAGGCGCCACCGTCGTTCAAGGGATGATAAATGATCAAGCAGCCATGGAGAAGATACTGAAAGAGTATGAGATTGACGTAGTTGTGTCTGCCGTCGGCGGCGAAGCAATACTCGACCAGCTTCCTTTGATCGAAGCCATTAAAGCCGTCGCCACTGTTAAGAGATTTCTGCCGTCGGAATTTGGTCACGACGTTGACCGAGCCGATCCAGTGGAGCCGGGACTAGAAATGTACAACACCAAACGCAGAGTTAGGCGCATGATAGAACAGCTGTCCATTCCGTATACGTACATTTGTTGCAACTCTATTGCCTCCTGGCCCTATTACGACAATACTCATCCCTCCGAAGTTCTTCCACCGTTGGATCAATTTCAAATCTACGGTGACGGAACCGTTCAAGCTTACTTTGTTGCCGGTTTCGATATCGGAAAATTCACAATGAAAATCATCGACGACGATCGAACTCTAAACAAAAGAGTACATTTCCGGCCAAAATGCAACTTATACGACATGAACCAACTTGCCTCGTTGTGGGAGAAGAAAATTGGAACAACACTTCCAAGAGTAACCATAACAGAAGACGATCTCTTGGCCGCAGCTGCAGAGATGATAATTCCAGAGAGTATAGTTGCATCATTTACGCACGATATATTCATAAAAGGATGTCAAATTAACTACTCTTGTGATGGTCCAACCGATCTTGAAGCAACCAATCTTTACCCGGACGAGGGTTTCAAGACGATGGACGAGTGCTTCACCGAGTTTGCTCAGAAATTGAACGGAATGGAGCTCCAGAGCAAGAACGGGAAGACAATGGCAGCGGCAACTAACTCTATGGTTGAACCTCTTCCCGTTACTGCAACTTGTGCTTGA 1053 47.39 MAAGRTGAEQKQRILVVGATGFIGQFLADASLEAGKETFILVRTISVCSSKSAAMDSFRERGATVVQGMINDQAAMEKILKEYEIDVVVSAVGGEAILDQLPLIEAIKAVATVKRFLPSEFGHDVDRADPVEPGLEMYNTKRRVRRMIEQLSIPYTYICCNSIASWPYYDNTHPSEVLPPLDQFQIYGDGTVQAYFVAGFDIGKFTMKIIDDDRTLNKRVHFRPKCNLYDMNQLASLWEKKIGTTLPRVTITEDDLLAAAAEMIIPESIVASFTHDIFIKGCQINYSCDGPTDLEATNLYPDEGFKTMDECFTEFAQKLNGMELQSKNGKTMAAATNSMVEPLPVTATCA 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 39008208 39010142 - BLOR21838 Blo16g01051 72242

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01051 350 PANTHER PINORESINOL REDUCTASE-RELATED 9 324 - -
Blo16g01051 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 263 IPR036291 -
Blo16g01051 350 Pfam NmrA-like family 14 245 IPR008030 -
Blo16g01051 350 PANTHER LEUCANTHOCYANIDIN REDUCTASE 9 324 - -
Blo16g01051 350 CDD PCBER_SDR_a 13 311 IPR045312 GO:0016491
Blo16g01051 350 Gene3D - 162 312 - -
Blo16g01051 350 Gene3D - 13 302 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01051 K13081 LAR; leucoanthocyanidin reductase [EC:1.17.1.3] - rcu:8269513 486.493
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g00484 Blo16g01051 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01025 Blo-Chr1:31610027 Blo16g01051 Blo-Chr16:39008208 3.05E-36 dispersed
Blo05g00802 Blo-Chr5:29358545 Blo16g01051 Blo-Chr16:39008208 1.84E-69 dispersed
Blo01g00484 Blo-Chr1:5295632 Blo16g01051 Blo-Chr16:39008208 1.58E-176 wgd
Blo16g01051 Blo-Chr16:39008208 Blo17g00792 Blo-Chr17:25281445 1.12E-61 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g257 Blo01g00484 Blo16g01051 Bda01g02098 . Bpe13g01329 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0473 Cone9ag0486 . . . . . . . . . Bpe02g02287 . Bma06g00771 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0015267 1 0 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 2 12