Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01054 ATGGGGATGGATTATTCGGAGAAAATGCAGGAAATGGCTATGGAGATGGGTTTCAAAAAGTATGTGGAGGCGTTAAAGGAAGAACGCCGGAAAATTACTGTTTTCCAGCGCGAGCTGCCGCTCTGTTTAGAACTTATCACTCAAGCGATTGAGTCTTGTACGCAGCAATTATCGGGGACGACGACGGAGTGTTTTAATGGAGGACAATCTGATTGCTCCGAGCAAACTTCCAGTGAATGTCCGGTGCTGGAGGAATTTATTCCGGTCAAAAAGGATTTATCTTCAGAATTTTTAGATGAAGAGAGAGAATCTCTAAAAATGAAAAAGGACAACAAAATTAGCGAGAAGGAGCAAGTGGCTCAATCGGATTGGCTTAAATCTGCTCAGCTATGGAATCCAGATCCTGACCTTGAGGAGGATTTACCGAAGAAGACGACTATCGTGGAGGTGAAGAAAAATGGCGGAGCTTTCCAGCCATTTCACAGAGAAAAAACAACCGGTAAAACAAACCCACCCGTCGAAAATGGGCTGACGGCGACTGTAATTTGTACGGCGGAAACAACTTCCCAAAGCAGCACGAGGCGAGAACAGAAAGAAGAACAGGGTAAAAGAAAGCTCCGTCGGTGTTGGTCGCCGGAGTTACATCGCCGATTCTTGAGTGCTCTTCAACAGCTCGGCGGCTCACATGTGGCGACGCCAAAGCAGATTAGGGAGCTAATGAAAGTGGATGCTCTGACTAACGATGAAGTTAAAAGCCATTTACAGAAATATCGTTTGCACACTAGAAGGTCAAGTCCTGTACACAACAATGGCGTCAAACAGCCACCGCAATATGTGGTAGTGGGTGGAATATGGGTGCCGCCGCCGGAATACGCAGTGGCGCGGGAGACAACCGTTCCCGGAGATGGAAACGAATTCTATGTAGTTCCAGCCACAGTTTCACAAGGTGCCCCGGGGTCCACCATTAAAAGGCCACAGCCAAAGCGATTGGTTCAGTCTAGCACGGAAGGAAGAAGGCTCAGCCATGGCGGAGAAGACGGGTGGGAAGTCGGTCTTCATTCTAATTCTCCGACGTCGTCTTCCACTCACACTTCTACAGCTTCCCCTGGGCTTTGA 1116 48.3 MGMDYSEKMQEMAMEMGFKKYVEALKEERRKITVFQRELPLCLELITQAIESCTQQLSGTTTECFNGGQSDCSEQTSSECPVLEEFIPVKKDLSSEFLDEERESLKMKKDNKISEKEQVAQSDWLKSAQLWNPDPDLEEDLPKKTTIVEVKKNGGAFQPFHREKTTGKTNPPVENGLTATVICTAETTSQSSTRREQKEEQGKRKLRRCWSPELHRRFLSALQQLGGSHVATPKQIRELMKVDALTNDEVKSHLQKYRLHTRRSSPVHNNGVKQPPQYVVVGGIWVPPPEYAVARETTVPGDGNEFYVVPATVSQGAPGSTIKRPQPKRLVQSSTEGRRLSHGGEDGWEVGLHSNSPTSSSTHTSTASPGL 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 39063120 39064593 + BLOR21841 Blo16g01054 72245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01054 371 SUPERFAMILY Homeodomain-like 203 263 IPR009057 -
Blo16g01054 371 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 205 260 IPR006447 GO:0003677
Blo16g01054 371 MobiDBLite consensus disorder prediction 352 371 - -
Blo16g01054 371 PANTHER TRANSCRIPTION FACTOR HHO2 18 366 - -
Blo16g01054 371 Gene3D - 204 262 - -
Blo16g01054 371 MobiDBLite consensus disorder prediction 315 338 - -
Blo16g01054 371 Pfam Myb-like DNA-binding domain 207 258 IPR001005 -
Blo16g01054 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 202 262 IPR017930 -
Blo16g01054 371 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 18 366 IPR044787 GO:0003700|GO:0006355
Blo16g01054 371 MobiDBLite consensus disorder prediction 315 371 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo11g00832 Blo16g01054 CCT
Blo01g00489 Blo16g01054 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00798 Blo-Chr16:33448564 Blo16g01054 Blo-Chr16:39063120 3.90E-63 dispersed
Blo16g01054 Blo-Chr16:39063120 Blo05g00652 Blo-Chr5:21105555 4.45E-34 dispersed
Blo01g00489 Blo-Chr1:5393225 Blo16g01054 Blo-Chr16:39063120 0 wgd
Blo11g00832 Blo-Chr11:14222147 Blo16g01054 Blo-Chr16:39063120 2.28E-118 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13459 PF00249 Myb_DNA-binding 1.00E-05 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01054 - - vvi:100257723 373.244