Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01063 ATGCCTCGACGCTCTGATGGTATTCGAGGTTACCACGATGGCCCTCGGTCAGTGATGGACCGAGGACCGGTACACATGCCAATCCATCCAGCTGCATTAGAAGAGGAACTTGAATTACAGCATAGAGAAATGCAGAGAATCATTGCTGAGAATCGTGTTGTTATTGATGATAATACACTTCTTCAGAGGGAACTTACGGCTGCAAAAGAAGAAGTTCACAGATTGGGGCAGATCATTCCCAAAGTCCGTGCAGAGAAAGAAGCACAAACTAGAGAGTTGATTGAAAGAGGGTTGAAGCTCGAAGCTGATCTCCGAGCTTCTGAGCCCCTGAGGGCTGAAGTTCTGCAGTTAAGGTCTGAAATACAAAAGCTGAATGCGTTGAGGAAGGATTTGTCTTCCCAAGTCCAGAATCTAACAAAAGATGTCACTCGATTGCAAGCTGAAAATCAGCAAATAACTAGCATGAGAGCTGATATTGATGGGATGAGGAAGGAGCTTGTTGAAGTCAGGAGGGCTTATGAATATGAAAAGAAAGCAAATGAAGAACAAATCGACCAAAAGCAGGCTATGGAGAAGAATCTAATTTCTATGGCTCGTGAAATAGAGAAATTACGTGCTGAGCAGTTGAACACTGAAAGGAGGGCCCCCCGAGGATATGGAGCTGGGGGTTATGGAATGTTGAATGGAAGTCCAGAAATGAGATATTCTGGTGGTAGTGCGTATGGTGATGGCTATGGCAAAGCTTGGTGGGGATCTTATGACCATCGAGAGTTGTCTAGTTTATCCATTCTGCAAGCAGCACTTGTGAATTCCCAGAGAACGAGCAAGGGAAGCTCATTCAGAGGATTTGTTTTTGCTGTGGCCGGATAA 870 45.06 MPRRSDGIRGYHDGPRSVMDRGPVHMPIHPAALEEELELQHREMQRIIAENRVVIDDNTLLQRELTAAKEEVHRLGQIIPKVRAEKEAQTRELIERGLKLEADLRASEPLRAEVLQLRSEIQKLNALRKDLSSQVQNLTKDVTRLQAENQQITSMRADIDGMRKELVEVRRAYEYEKKANEEQIDQKQAMEKNLISMAREIEKLRAEQLNTERRAPRGYGAGGYGMLNGSPEMRYSGGSAYGDGYGKAWWGSYDHRELSSLSILQAALVNSQRTSKGSSFRGFVFAVAG 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 39171912 39173564 - BLOR21850 Blo16g01063 72254

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01063 289 MobiDBLite consensus disorder prediction 1 19 - -
Blo16g01063 289 Coils Coil 114 165 - -
Blo16g01063 289 Coils Coil 180 214 - -
Blo16g01063 289 PANTHER MYOSIN-LIKE PROTEIN 1 257 - -
Blo16g01063 289 PANTHER PROTEIN FLX-LIKE 2 1 257 IPR040353 -
Blo16g01063 289 SUPERFAMILY Myosin rod fragments 106 202 - -
Blo16g01063 289 MobiDBLite consensus disorder prediction 1 23 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01063 - - - vvi:100242187 362.459
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00733 Blo-Chr6:30537495 Blo16g01063 Blo-Chr16:39171912 9.29E-61 dispersed
Blo06g00738 Blo-Chr6:30595765 Blo16g01063 Blo-Chr16:39171912 2.71E-36 dispersed
Blo16g00930 Blo-Chr16:37323141 Blo16g01063 Blo-Chr16:39171912 7.51E-27 dispersed
Blo16g01063 Blo-Chr16:39171912 Blo03g01205 Blo-Chr3:38319102 4.67E-30 dispersed
Blo16g01063 Blo-Chr16:39171912 Blo19g00027 Blo-Chr19:440432 7.69E-54 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g307 . Blo16g01063 . Bda11g01148 Bpe13g01347 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g01148 . . . Bma06g00758 . . . . . Car04g01990 Car15g00842 Cpe13g00417 . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003698 1 1 1 1 1 1 3 1 1 1 1 1 0 1 1 0 1 0 2 1 1 1 1 2 1 1 1 5 6 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g01063 Blo_Chr16 FPKM 0.249272 0.464471 0.246728 0.200648 0.058907 0.059794 0.030246 0.255624 0.283462 0.272447