Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01064 ATGAAAGCTGTGAGTTGCAATGGATGTAGAATTCTACGGAAACGGTGCCCAGAAGACTGCGCCATTAGACATTGTCTTCGGGGGATTGATTCTCCTGATTCTCAAGCAAACGCCACTCTCTTCCTCGCCAAATTCTATGGCCGATCCGGCCTATGTAACTTAATCAAAGCCTGCCATGAAAGCCAGCGCCATAGTCTTTTTAGGTCGTTGTTATACGAATCTTGTGGACGGATTTTGAATCCAGTTTATGGGTCGTTAGGGTTGCTTTACTCCGGCGACTGGTCGCAGTGCGTGGCGACTGTCCGTTCTGTTCTCCGGGGTTCATTCACGGCCGACGAAAATAACGATGGAACGGAGTCTATTCCACTTCCTCTCGCCGGTTGTGATATGCGTCATGTGTCAAATAAGAGTAACCTTCCCATTAAAAAGTCTCGCAAGGCTTCAACTACAACGCGTCCGAAGAGAGCTGTCCCGGAGCTCGGCGGCGATGTTAGTACCAGTGCTTTGTTGGAGAAATTCAGCCGCTTGAACTCCAATCTTTCGCCTGCTCGAGATCGGGTTTTTCATTTGTGTTTCGTGATATTTAGATTTCGAGCTATTATCCCTTTTGAGTTTTCAGAATCAACAGTTTTTGATGCATTATGTGCTTATCCTGGCGGAAGAAAATATGAGAATGTAGCCAAAACTGAAATACCTAGTGGTGCTGTTTTGAAAGGACTTCTGAAAACTGCAATAATGTTATCAGAGGAGAAAGATAAATGCACATTCACTTGA 774 45.35 MKAVSCNGCRILRKRCPEDCAIRHCLRGIDSPDSQANATLFLAKFYGRSGLCNLIKACHESQRHSLFRSLLYESCGRILNPVYGSLGLLYSGDWSQCVATVRSVLRGSFTADENNDGTESIPLPLAGCDMRHVSNKSNLPIKKSRKASTTTRPKRAVPELGGDVSTSALLEKFSRLNSNLSPARDRVFHLCFVIFRFRAIIPFEFSESTVFDALCAYPGGRKYENVAKTEIPSGAVLKGLLKTAIMLSEEKDKCTFT 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 39175828 39180346 - BLOR21851 Blo16g01064 72255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01064 257 ProSiteProfiles LOB domain profile. 4 110 IPR004883 -
Blo16g01064 257 MobiDBLite consensus disorder prediction 139 158 - -
Blo16g01064 257 Pfam Lateral organ boundaries (LOB) domain 5 99 IPR004883 -
Blo16g01064 257 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 4 157 - -
Blo16g01064 257 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 4 157 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g01064 Blo-Chr16:39175828 Blo18g00717 Blo-Chr18:17618546 5.86E-39 dispersed
Blo16g01064 Blo-Chr16:39175828 Blo16g00357 Blo-Chr16:10667141 2.20E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13461 PF03195 LOB 9.80E-22 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01064 - - rcu:8285784 169.859