Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01072 ATGAACTGTTCACCAAGTCTGTCCTCTGGCTGGCCATTCGGTGGAGCCCACCTTGCAAACACGTCAATGGGATTGGTCAACCCAGCGAATTCCTCTGGCAAAGAGGATCTAATTCTACCTTCTTGTTCATCGGCTTCAATGGTGGATTCTTTTGGTCCAACCTTCAATGGTGAATTTTTTGATGTCCATAATAACTGCAATTCTTCAAACCTGGTTGGAATAAGCAGAGATAGTGAAGCTTCGTTGAGAAGAAATGTTGATAGAACTCTTGATATGAGTTGGAACCCACCAAATCAAATGATGAAAAGAATTAATTTATCGAATTTGATTCACCCGAGCTTACCTCAATTTCCAGCCGATTCTGCATTCATCGAGCGAGCAGCTATATTATCTTGCTTCAATGGTGGAAATCTCATGGAAACAGCTAGTCCTTTCAGCATTCCTCAACCCATGGCTCTTTACTCTAGGAGTTTGGTGATTCCAGGCAATCAAGAACTTACAGCCATTAATGGGATGAGATCAGATACTATGGGACAGCCTCAAAAACATGATATTAGTCACATAGGTGAAGCCTCCATAGATGTTTGCTTGGAGGATGGAACTAACAGTCCTAAGAATGAAGGACAAAATGAGAACCATTTGAGATCTCACGGTGAAGAAAAACAATGTAATGGCGGGTCGGAAGATGAAATGAGTGTTAGTGGTCAAGATGAACCATCTATGGTGGAGGGTAGATGTAAAGAGTCTTCTGGCAACAAAAGAAGGAGGAGTAGGCAGAGTAATGGACTTGATCAAGCCAAAGATGCTGCACAACAAACAGGTGAATCTGCAAGGGATGATAATGAGATTCAACATAAGAACGATCAAAACCCATGTTCAGTTAACAACAAATCTCCTGGAAAACATGGCAAACAAGGATCTCAAGCCTCCGAACCACCCAAGGAAGAATACATTCACGTTAGAGCACGAAGAGGTCAGGCAACAAATAGCCATAGTCTTGCAGAAAGGGTTAGAAGGGAAAAGATCAGTGAACGAATGAAGTTTCTTCAAGACCTTGTACCTGGTTGCAGCAAGGTCACTGGCAAGGCGGTAATGCTAGATGAAATTATAAATTACGTACAGTCACTGCAACGACAAGTAGAGTTTTTGTCAATGAAACTTGCCACTCTCAATCCGCGGATAGATTTCAGTATTGATGGTCTTGCGAAAGATATTCTTAAAACAAGGACTGGTTCCTCATCCACGTTGGGCTACTCACCAGACATTTCTATGGCTTATCCTCCACTTCAACTTTCTCAACAAGGACTTCTTTCCTGGGGTGTTAATGGGATGGGCAGCTCTTCCGAAATTCTCCGGAGAGCACTTGCTTCCCAGTTGACACCAATGACTAGTGGATTTAAAGAGCCTTCTCAGCCATCGAATGTGTGGGAGGATGATCTCCACAATGTTTTCCAGATGAGCTTTGGAACTGCAGCTCCTTCCAATAGCCAAAATGTTGATGCATCCTTCACCTACACTGCTCATCAACGGCAATATCATGGCCAATACTTGTCCTTAGAGGAGGATCTTCATGTTGATAAATTATCATCTAACATTCCATAA 1602 42.57 MNCSPSLSSGWPFGGAHLANTSMGLVNPANSSGKEDLILPSCSSASMVDSFGPTFNGEFFDVHNNCNSSNLVGISRDSEASLRRNVDRTLDMSWNPPNQMMKRINLSNLIHPSLPQFPADSAFIERAAILSCFNGGNLMETASPFSIPQPMALYSRSLVIPGNQELTAINGMRSDTMGQPQKHDISHIGEASIDVCLEDGTNSPKNEGQNENHLRSHGEEKQCNGGSEDEMSVSGQDEPSMVEGRCKESSGNKRRRSRQSNGLDQAKDAAQQTGESARDDNEIQHKNDQNPCSVNNKSPGKHGKQGSQASEPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATLNPRIDFSIDGLAKDILKTRTGSSSTLGYSPDISMAYPPLQLSQQGLLSWGVNGMGSSSEILRRALASQLTPMTSGFKEPSQPSNVWEDDLHNVFQMSFGTAAPSNSQNVDASFTYTAHQRQYHGQYLSLEEDLHVDKLSSNIP 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 39276599 39279494 + BLOR21859 Blo16g01072 72263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01072 533 MobiDBLite consensus disorder prediction 241 262 - -
Blo16g01072 533 PANTHER TRANSCRIPTION FACTOR BHLH49 30 504 - -
Blo16g01072 533 Pfam Helix-loop-helix DNA-binding domain 329 377 IPR011598 GO:0046983
Blo16g01072 533 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 326 376 IPR011598 GO:0046983
Blo16g01072 533 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 324 396 IPR036638 GO:0046983
Blo16g01072 533 MobiDBLite consensus disorder prediction 210 226 - -
Blo16g01072 533 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 30 504 IPR024097 GO:0006355
Blo16g01072 533 SMART finulus 332 382 IPR011598 GO:0046983
Blo16g01072 533 MobiDBLite consensus disorder prediction 287 305 - -
Blo16g01072 533 CDD bHLH_AtBPE_like 316 401 - -
Blo16g01072 533 Gene3D - 323 396 IPR036638 GO:0046983
Blo16g01072 533 MobiDBLite consensus disorder prediction 197 313 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00466 Blo16g01072 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00067 Blo-Chr7:975466 Blo16g01072 Blo-Chr16:39276599 5.75E-64 dispersed
Blo15g00700 Blo-Chr15:22161819 Blo16g01072 Blo-Chr16:39276599 1.32E-47 dispersed
Blo16g01072 Blo-Chr16:39276599 Blo06g00398 Blo-Chr6:23064680 4.01E-45 dispersed
Blo01g01485 Blo-Chr1:54299482 Blo16g01072 Blo-Chr16:39276599 1.55E-49 transposed
Blo01g00466 Blo-Chr1:5141924 Blo16g01072 Blo-Chr16:39276599 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13463 PF00010 HLH 6.80E-06 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01072 - - zju:107429134 540.036