Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01081 ATGAGAACTGGGAAATCCAATCGGGTAGAAGACGAGTTCGAGGAGGAAGAGTTCATCTCCAAAAAAGATGGCCCTTCTTCAACTACTATTGCCAACATTAATAGCAACAGCAAAGATGCGAAGAACAACGATAAAGCTAATGCAATTCGGTCCAAGCATTCGGTTACAGAGCAACGAAGAAGAAGCAAGATCAATGAGAGGTTCCAAATGTTGAGAGATCTCATACCTCATAGCGATCAAAAGAGGGATACAGCATCTTTCCTACTCGAAGTGATCGAGTATGTTCGATATTTGCAAGAAAAAGTGCAAAAGTGCGAGGGTTCATATCGGAGCTGGAGCGGGGAGCCTACCAAATTAATGCCATGGAGAAATAGTCATTGGCGGGCCCAAAGTTTTGCCGGTCAATCTCCGACCGTAAAAAACGGTTCGGTTCCGGGATTAACTTTTCCGGGTAAATTTGATGAAACCCAAAACCCGGAGGATTCACTTGCATACAGGGACCTTGTTCGACAAGGCGATGGAGCAAATATAGGGACTCCTTTGCAGGTTAGCATTCCGTCTTTTGTGCGAAGCGATGGCATTCTTGCTCGTCCTCTTCAAGCTTCGGCTTCTATTGTGCAGTCAACTGAGTGTCTAGTCCCGTCCGAGGCTTTGAACCAGCATGAGGAGGTGATTATCGAAGGCGGAACCATCAGCATCTCGAGTCTTTACTCAGAAGGCTTATTGAGCACTTTGACGCAAGCACTCAACGGTGCCGGAGTGAATCTGTCTCAGGCCAGTATCTCTATTCAGATAGACATTGGAAAAAGAGCAGCCGGAGCATCGGGGTTTAAGGAAGTTCAGAATCTACAGCAAAAAAGACCCTCCCACCAACATCTAAGCCTCCGGAGATTCCTCCGATCGCCTTTTGCCATTCTTATTGGACTACTGTTCCATTCGGACTGCAATCTGCAAACATATAACAACCGGTAA 972 46.3 MRTGKSNRVEDEFEEEEFISKKDGPSSTTIANINSNSKDAKNNDKANAIRSKHSVTEQRRRSKINERFQMLRDLIPHSDQKRDTASFLLEVIEYVRYLQEKVQKCEGSYRSWSGEPTKLMPWRNSHWRAQSFAGQSPTVKNGSVPGLTFPGKFDETQNPEDSLAYRDLVRQGDGANIGTPLQVSIPSFVRSDGILARPLQASASIVQSTECLVPSEALNQHEEVIIEGGTISISSLYSEGLLSTLTQALNGAGVNLSQASISIQIDIGKRAAGASGFKEVQNLQQKRPSHQHLSLRRFLRSPFAILIGLLFHSDCNLQTYNNR 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 39364982 39368205 - BLOR21868 Blo16g01081 72272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01081 323 Gene3D - 46 117 IPR036638 GO:0046983
Blo16g01081 323 Pfam Helix-loop-helix DNA-binding domain 50 99 IPR011598 GO:0046983
Blo16g01081 323 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 98 IPR011598 GO:0046983
Blo16g01081 323 SMART finulus 54 104 IPR011598 GO:0046983
Blo16g01081 323 MobiDBLite consensus disorder prediction 23 42 - -
Blo16g01081 323 CDD bHLH_AtBIM_like 47 123 - -
Blo16g01081 323 MobiDBLite consensus disorder prediction 1 22 - -
Blo16g01081 323 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 292 IPR044295 GO:0003700|GO:0006351|GO:0046983
Blo16g01081 323 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 46 120 IPR036638 GO:0046983
Blo16g01081 323 PANTHER TRANSCRIPTION FACTOR BIM2 1 292 - -
Blo16g01081 323 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01201 Blo-Chr6:35547454 Blo16g01081 Blo-Chr16:39364982 2.01E-14 dispersed
Blo15g00347 Blo-Chr15:4381286 Blo16g01081 Blo-Chr16:39364982 6.46E-52 dispersed
Blo16g01081 Blo-Chr16:39364982 Blo10g00026 Blo-Chr10:233643 5.35E-09 dispersed
Blo16g01081 Blo-Chr16:39364982 Blo01g00464 Blo-Chr1:5121398 3.51E-131 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13465 PF00010 HLH 3.60E-13 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01081 - - qsu:112028766 335.109