Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01085 ATGGAACCATCCCAAGTTGTGGTTCTACCTTTGGAGCTTCCCGAACATAATTGTATGAATAACATGGGAAAGTTGAATGTGAAAGGATATAAAAATCATCGGCCTGGTATACCAGCTCTTAAGAAGCGAGGTCATGGCGGCCGTTCTTGGATAAAAATTGATCAGGATGGAAACTCAAAAATATTGGAACTTGATAAGGCCACAATAATGAGGCATTGCTCCCTACCTTCAAGAGATCTGCGACTTTTGGATCCTATGTTCATTTATCCTTCTACGATACTGGGACGAGAGAAGGCAATTGTGGTCAGTCTTGAACAGATCAGGTGTATAATCACTTCAAATGAAGTTGTTTTAATGAACTCCTTGGATGGATGTGTTGTACAGTACAGGTTGGAGCTGTCCAAGCGCCTCCAGACTTCCAAATATCAATCAGGTGAACAACTATATGGTTTACCGTTTGAGTTTAAAGCCCTGGAGCTGGCTTTGGAGCTCACTTGCATGTCTCTTGATGCTCAGGTTAAGGAACTGGAAATGGAGATATATCCCGGCCTAGATGAACTTGCATTATCCATTAACACGCTTAACCTAGAACGGGTCCGAAGATTTAAAGGCCATCTCCTTGGATTGACCCAGCGTGTTCAAAAGGTTCGTGATGAAATTGAACATCTCATGAATGATGATGGTGACATGGCTGAGATGTATTTGACTGAGAAAAAAGAAAGGTTGGAGGGTTATACCCTAAATGACCTTTACGTTCAAACAAAGCGCAGATCAAAGTTGCTATCCAAATCCGCTCCCGTCTCTCCAGTTGGATCAATTAATCGAACCCAGAAACTGGAAAGGACTTTTAGTGGTGTTGTTAGTTCAAGCAGACACGGAAGCTCGACAAGTTTATCCAACAATGGAGAAAACATTGATCAACTGGAAATGCTACTTGAAGCCTACTTTGTCGGCATAGACAACACCCTCAACAAGTTATTATCGCTCAAACAATGTATTGATGATACTGAAGATTTAATCAACATTAAACTGGATAATGTTCAGAACCACCTGATAAAATTTCAGCTACTTCTCACAGCAGCTACTTTCATGGCTACAATCTTTGCTACGGTTACAGCCGTATTCGGTATGAATTTCGCCGCTCAAATCTTTGATTCTCCAACTGCATTCAACTGGGTTTTAGCTGTAACTAGTGGCTTTTGTGTATTATTTTTCTTATCTTTCCAGATTTATTTTAGACATAAGAAATCTTTCCCACTGTAA 1263 40.54 MEPSQVVVLPLELPEHNCMNNMGKLNVKGYKNHRPGIPALKKRGHGGRSWIKIDQDGNSKILELDKATIMRHCSLPSRDLRLLDPMFIYPSTILGREKAIVVSLEQIRCIITSNEVVLMNSLDGCVVQYRLELSKRLQTSKYQSGEQLYGLPFEFKALELALELTCMSLDAQVKELEMEIYPGLDELALSINTLNLERVRRFKGHLLGLTQRVQKVRDEIEHLMNDDGDMAEMYLTEKKERLEGYTLNDLYVQTKRRSKLLSKSAPVSPVGSINRTQKLERTFSGVVSSSRHGSSTSLSNNGENIDQLEMLLEAYFVGIDNTLNKLLSLKQCIDDTEDLINIKLDNVQNHLIKFQLLLTAATFMATIFATVTAVFGMNFAAQIFDSPTAFNWVLAVTSGFCVLFFLSFQIYFRHKKSFPL 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 39382813 39385742 + BLOR21872 Blo16g01085 72276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01085 420 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 356 408 IPR045863 -
Blo16g01085 420 Coils Coil 206 226 - -
Blo16g01085 420 Gene3D - 39 121 - -
Blo16g01085 420 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 7 420 IPR039204 -
Blo16g01085 420 CDD Mrs2_Mfm1p-like 50 416 IPR039204 -
Blo16g01085 420 PANTHER MAGNESIUM TRANSPORTER MRS2-5 7 420 - -
Blo16g01085 420 Gene3D Magnesium transport protein CorA, transmembrane region 126 351 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00506 Blo-Chr10:11257200 Blo16g01085 Blo-Chr16:39382813 4.71E-152 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01085 K16075 - rcu:8264709 551.206