Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01086 ATGGGATCGACAAATGTGCTCACAGATTTGGTATGGGAAGAATGGAATGGTTCTTCTTCTACGAAGCTTTCTAAAACTGCCACCATAACTACCACTCCTCACCTTACCATCGAAAGGCGAGTTATTACGATTTCATGCGGTAGCCGGTTTAATCACGTTTGGGGACGATTCTTGGATGCATTCGTTCCAGAGGGATTTCCTAGCAGTGTAACTCCGGATTATGTCCCTTTTCAAGTATGGGATTTGTTGCAGGGTCTCTCAACATACATAAGGACTATGCTTTCTACACAAGCTTTGTTGAGTGCCATTGGAGTTGGCGAGAAATCGGCAACTGTGATTGGTGCCACATTTCAGTGGTTTCTTAGGGATCTGACTGGAATGGTTGGAGGTATCTTATTCACATTCTATCAGGGATCAAATCTAGATAGTGATGCAAAAATGTGGCGTTTGGTTGCAGATCTTATGAATGATCTAGGGATGTTAATGGACCTACTCTCCCCATTATTTCCTTCAGCATTTGTACTCATTGTTTGCTTAGGCAGCCTGTCAAGATCATTCACTGGTGTTGCTAGTGGAGCTACCAGAGCTGCTTTAACACAGCATTTTGCCCTTCAGCATAACGCAGCAGATATATCTGCCAAGGAAGGAAGTCAAGAGACAGTAGCCACAATGATAGGAATGGCATTGGGTATGCTTCTTGCGCGTAATACAGTAGGACATCCGCTGGCTATTTGGTTCTCTTTTTTGTGTCTCACCATGTTTCATATGTATGCGAACTACAAGGCTGTGCAGTGCCTTGCGTTGACTTCATTAAACCCAGAGAGAAGTTCAATTGCTTTGCAGCATTTCATGGCGTCTGGTAAAGTTCTCTCACCTGAAAAAGTCTCGAGGATGGAGCATGTATTACCCACTTGGGCGGCCTTTTCATGGAGCTCCAAGAATGCAAAATTACTGCATGCTCGAGTTCAATTAGGCGTGAGGCTTACTTCCCTTGATCAATTGGAAATGATGGACTTGATGCAGTCAACGGGAGCTCACTATAATACAGCAAAGCATTTGCTGGTGGAGAGGAAGGAACATGTCGGCATTATTATGCATAAAGATTCAACCGCAGCAGATGTCTTGCGTGCTTTTATTCATGCACTTGTTATGGCAAATCTTCCTGATACAAAAAACTCCAAGCATTTGGAGAGCAGAACATGGATGGATAAAAACTATCAAGTTTTTATTGAAAAGCTGAAGTCATCGGGTTGGAAAACAGAACGACTGCTCTCGCAATCGATTGTGTGGAGAGCAAACTGGTTATCTGGTTCTGTAGATGAGAAGATTGACTAA 1335 43.3 MGSTNVLTDLVWEEWNGSSSTKLSKTATITTTPHLTIERRVITISCGSRFNHVWGRFLDAFVPEGFPSSVTPDYVPFQVWDLLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMVGGILFTFYQGSNLDSDAKMWRLVADLMNDLGMLMDLLSPLFPSAFVLIVCLGSLSRSFTGVASGATRAALTQHFALQHNAADISAKEGSQETVATMIGMALGMLLARNTVGHPLAIWFSFLCLTMFHMYANYKAVQCLALTSLNPERSSIALQHFMASGKVLSPEKVSRMEHVLPTWAAFSWSSKNAKLLHARVQLGVRLTSLDQLEMMDLMQSTGAHYNTAKHLLVERKEHVGIIMHKDSTAADVLRAFIHALVMANLPDTKNSKHLESRTWMDKNYQVFIEKLKSSGWKTERLLSQSIVWRANWLSGSVDEKID 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 39390826 39394961 + BLOR21873 Blo16g01086 72277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01086 444 PANTHER PROTEIN ROOT UVB SENSITIVE 3 8 444 - -
Blo16g01086 444 Pfam Vitamin B6 photo-protection and homoeostasis 51 286 IPR006968 -
Blo16g01086 444 PANTHER RUS1 FAMILY PROTEIN C16ORF58 8 444 IPR006968 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00826 Blo-Chr7:26343107 Blo16g01086 Blo-Chr16:39390826 2.44E-50 dispersed
Blo11g00310 Blo-Chr11:2495225 Blo16g01086 Blo-Chr16:39390826 1.13E-28 dispersed
Blo16g01086 Blo-Chr16:39390826 Blo03g00281 Blo-Chr3:5692638 7.98E-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01086 - - jre:109014367 648.277