Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01089 ATGGTTGCTCTCTTCGTTGGCTTGAGCTCTGCTCCACCGGCGGCGAAATGGAGGTCTATGAAGCATCTGAGGGGGAGAGTTACGGCCGATGCGTTTCCCTCCTTCCTTCCAAAAGAAGTCGACAGAATCAAAGATCCTTTTGCTCGGAAGCTAGCGTCAAGGATTGAGAGGGTTCCAGTGAGCTTTTCTCAAAATTGTGTTATGACCAGTTGTGTGAGGCCATCGATAAAGAGTGAAACGAGTCCAGTGGTTCTACTCCATGGTTTTGACAGCTCCTGTTTAGAGTGGAGATATACACATCCATTGCTTGAGGAGGCTGGTTTGGAGACTTGGGCTGTTGACATTCTAGGATGGGGATTTTCTGATTTAGAAAGCCTTCCACCAGTCGATGTGACATCAAAGCGTGAACACTTTTATCAGCTTTGGAGTACCTACATTAAAAGGCCTATGTTATTGGTTGGACCAAGCCTCGGTGCTGCTGTTGCTATTGATTTTGCTGTCAAATATCCAGAAGCTGTTGATAGGCTTGTTTTGATCGATGCTAGTGTCTATGCGGAAGGCACTGGAAACTTATCAACCTTACCAAGAGGGCTAGCCTATGCCGGGGTGTCTTTGTTAAAGAGCATACCTCTGCGCTTCTATGTGAACGTGCTGGCATTCAATTCCATATCACTGGATACAAGCATTGATTGGATGAAAGTGGGTCGTTTACAATGCCTTTTACCTTGGTGGGAGGATGCAACTGTGAATTTTATGATGAGCGGAGGTTATAATGTCAGCAGCTTGATAAAACAGGTCAAACAGGAAACACTCGTCATATGGGGTGAGAATGATCAGATTATCAGCAACAAATTTGCATTGAGATTGAACAGTGAGTTGCCAAATTCAATCCTTCGTCAAGTGCCCGGCTGCGGGCACATTCCTCACGTGGAGAAGCCAAGCATCGTCTCCAATTTGATCACGGAATTTGTTAGAGAAGAATACGCGGGTAAAATGGTTAAGCTTTTCTCATAA 1014 45.27 MVALFVGLSSAPPAAKWRSMKHLRGRVTADAFPSFLPKEVDRIKDPFARKLASRIERVPVSFSQNCVMTSCVRPSIKSETSPVVLLHGFDSSCLEWRYTHPLLEEAGLETWAVDILGWGFSDLESLPPVDVTSKREHFYQLWSTYIKRPMLLVGPSLGAAVAIDFAVKYPEAVDRLVLIDASVYAEGTGNLSTLPRGLAYAGVSLLKSIPLRFYVNVLAFNSISLDTSIDWMKVGRLQCLLPWWEDATVNFMMSGGYNVSSLIKQVKQETLVIWGENDQIISNKFALRLNSELPNSILRQVPGCGHIPHVEKPSIVSNLITEFVREEYAGKMVKLFS 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 39402415 39406561 + BLOR21876 Blo16g01089 72280

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01089 337 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 23 327 - -
Blo16g01089 337 Pfam Alpha/beta hydrolase family 83 313 IPR000073 -
Blo16g01089 337 Gene3D alpha/beta hydrolase 71 329 IPR029058 -
Blo16g01089 337 SUPERFAMILY alpha/beta-Hydrolases 81 325 IPR029058 -
Blo16g01089 337 PRINTS Epoxide hydrolase signature 166 179 IPR000639 GO:0003824
Blo16g01089 337 PRINTS Epoxide hydrolase signature 107 122 IPR000639 GO:0003824
Blo16g01089 337 PRINTS Epoxide hydrolase signature 301 323 IPR000639 GO:0003824
Blo16g01089 337 PRINTS Epoxide hydrolase signature 87 105 IPR000639 GO:0003824
Blo16g01089 337 PANTHER HYDROLASE 23 327 - -
Blo16g01089 337 PRINTS Alpha/beta hydrolase fold signature 107 122 IPR000073 -
Blo16g01089 337 PRINTS Alpha/beta hydrolase fold signature 152 165 IPR000073 -
Blo16g01089 337 PRINTS Alpha/beta hydrolase fold signature 166 179 IPR000073 -
Blo16g01089 337 PRINTS Alpha/beta hydrolase fold signature 270 284 IPR000073 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01089 - - - bhj:120075164 489.96
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00554 Blo-Chr11:5237916 Blo16g01089 Blo-Chr16:39402415 4.77E-06 dispersed
Blo16g01089 Blo-Chr16:39402415 Blo10g00154 Blo-Chr10:1786595 1.07E-123 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g45 . Blo16g01089 . Bda11g01180 Bpe13g01378 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone9ag0543 . . . . . . . Bda11g01180 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001673 2 3 2 2 3 2 3 2 2 2 2 2 2 2 2 3 2 3 3 2 3 3 2 2 2 2 2 3 3 2 70
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g01089 Blo_Chr16 FPKM 10.616166 11.164313 12.507693 13.765631 10.80615 10.992117 11.798458 28.243015 25.190748 27.187