Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01111 ATGTATCAAAACGTTTTATTATATTCTTCTGTCTTCTGGAAGTTGGGAGGCGTCTATTCTGGAAGTTCTGTTGGGGGACATGATAATGGCTCACATCACTCCCTGTCTTCTCGGCATGCATCAATGTTGGGGACTTCACAGGAAGCAGATGCTTCTGCATACCGGGGACATTCTTCAACGACTACAAATTATGGGGGACAATATAGTTCTTTGTATAGTTCTTCTTCATTGGGCGGTACCACACAGGTACCCCCAATGAGTGTCAAAGGTTCTGGGTCATCAGTTTTGGAAGGCCGTGGCGCCTATGCCTCTGCTATTCCTAATTCACCTAAGTTTTCTTCCAGTGAATATGTCTCCTCATCAAACCATGGTTATGGTCAGAAAACTGATCCTTTTTTTCCAGAGAAGGTTCCTGAATATCCTACCCTTGAGAGACGTCAATATAGTGAGCGACAGAGTACTTATATCGCGAGGGACATGCAGAATGAACAAACAGGAAGATTCTTGGATTCTGCTGGTTTTGGTCATCAGCGTCACTCAGACATGTATGATCGCATTGATCCAGTCCCCCTACTTCGACAAGAACAGTTGTTAAAAGTTCAATCGCTGCAGTCTTCCACCCTTGATGGGAATGCAAGACAAAATGATTATCTTGCAGCAAGAACCACTGTTAGTCGTCATTCTGCCCAAGAAGTCGTACCATATGGAGGAAGAGTAGATGCTGATCCTCGCAGTATATCTTCCCTTAATACTTCATTTAGCAGTCAACGTACTCCGTCAATATTAGGAGTAGCTCCAAGGAGAGATGTGGATGAACTTCTCTACTCCCAAAGTTCATCAAACCCAGGTTATGGAGTGAGCTTACCTCCTGGTAGAGACTACGCCACTGGAAAAGGTCTACATGGCACATCTCTAGAGTCAGATTACTCAGGTAGCATTTTATCACGTAGTGGTCATTCAAGGATTGATGACCGCAAGGACGAAAAAGCTGGTTATCTTCGGGAATTTGAGCTTCGAGAGGAGGAGCGACGTAGGGAGCGTATGCGTGCCAGAGAGAAAGAAAGAGATCGGGAGAAGGAACGCGAGCGTGAAACAGAAAGAGAAAGGGAAAGAGAAAGAGAACGAGAAAGAGATCGAGATCGAGAACGAGAACGAGAGCGGGACAAGGAAAGGGAACGAGAACGAGAACGGTTGTTGGTGCGGCAAAAGTTAAGAGAGCGTGAAAACAAACGAGGAATTGAGATCAGGCGAGAACGAACTCCACCAAGGGCATCTAGGGATCGCGGTGGTTCCTCCTTGACGAAGGAGGGAAAACTCTTGCGACGAGATTCTCCATATCATGAAGCTTTGCATAGGCGCCATTCACCTATTAAAGAGAAAAGAAGAGAATATGTCTGCAAGGTATATTCATATAATTTTGTTGACGTGGAGAGAGATTATTTAGCAATAGATAAGCGTTATCCCCGACTCTTTATACCCCCTGAATTTTCAAAGGTCGTGGTGAATTGGCCTATGGAGGAGCTGAAACTGTCTATTCATACCCCTGTCAGTTTTGAGCATGATTTCATAGACGAAGGGAGTGGGGATGTGTCAAAAGAGCCATGCTTTGATGTTTCGGCTGTAGATCCTACAAAGTCGGAACATGTAAATGTGGTGTGGAATGCAAAGATTGTTTTAATGAGCGGCCTGAGCAGAAATGCTTTGGAGGATTTGTCATCTGAAAGAAGTCAAGACAATCGAATACCACATATTTGCAATATCCTTAGATTTGCCGTTCTTAAAAAGGACCATTCTATTATGGCGATTGGTGGCCCTTGGAAATCTGATGATGGAAATGCTCCATCAATTGATAATACCTCTTTGTTTCAAACAGCTCTTAGATATGCAAAGGATGTTACACAAGTTGATTTGCAGAATTGCCTCCATTGGAATCGTTTTCTTGAGATTCACTATGATAGACTGGGAAAGGATGGGCTATTTAGCCATAAAGAGATTACTGTACTTTTCGTCCCAGATTTGTCTGACTGTGTCCCTTCATTGGAAGTGTGGCGTGAACAATGGCTTACTCATAAGAAGGCAGTTGCTGATAGAGAGCGGCAACTTTCAAAAGAGAAATCCAAGGAGAAGAAGGAGCTGGCAAAAGATAAGAAAATACAAGCAAAAATGGTAAAGAACCAAGAGTCTCTGTCTTCCAAGCCAGATGGTGTCGAAGATAAGGAGAAAACTAGTAAGGATGTTAATAAGAATTCAACTGAGAAAGCCGATGATGGAAGTGACAAAAATCTTGATAAGAAAGTCTTGAGCGAAAAATGTGTAGAAGAAGAGGATATCGAGAAGAAAAAGGAGGAAGTGGCTGCAGGCACCGTGAAGAAAGGAAAAAAGAAAGTTATAAAGAAGGTGATCAAACAGAAGGTTAAAATTGGTGATGCTGGTGATTCTGCGACAAAGAAAAATGACGAGCAGAGTGAAAAGGAGAGTACAGAAAAGAGCATGGGGTCAGATATTTCTGCTACACAGGATGAATCTTTGGCTGATCCTACAAAGGTTAAAACTTTTGTAAGAAAAAAAATTGTTAAAAAAGTTCCTGTGGAAAAAACTACTGACGGTGAAAACAAAGTCAGTCAACCGGGATCAAAGGATGAAAATGAAAAGGACAGCTCAGAAGATAAAAAGGATGATCCGGATAGTGTGGTAGCTGTGAAAGATAATGTTGTAAAAACTACTGTAAAGAAAAAAGTAATTAAAAGAGTTCCTAAAAGAAAAGTATCTGGAGTGAAATCAAATATTGGGGTAGTCGACAATAATGTTGATGGTAAAATGGATGAGACGGATGTTGCAACAGAAATGGCAGAAAATAAAGTGAATCTCTCCATGGGTGAAGAAAGCCTGGAGGCCAAGAAAACAGAGAAGAAATTGGCTCCAGAAACCAAGTCAAAGGGTGACAAGGATGATAAGGAAGATGAAAATAAAGTTAGCACTATGCCAAAGACAGCGAATGAGGTTGACCGGCAGAAAAAGGCTCAGAATGACGGAAATAATGGTGAAGCTGAAAAATCGAAGGATGGAGAAAAGCCAAAAGATGGCAAAGGTGAGATAGGCAAAGATGGAAAGAATGAGTCTAGAGGCAGCAGGGAAGTAAAAGAAAAGAAGTCTGTAGATCCTCCTCGGCACCCGGGATTCGTTTTACGGACAAAAGGAAGCAAGGATTCTAAACTACGATCTACATCACTTTCCCTGGATTCTCTTTTGGAATACACTGACAAGGACACTGACGAATCAACATTTGAGCTTTCACTATTTGCCGAATCACTGTACGAAATGTTTCAGTATCAGATGGGTTGTCGTATTTTTACTTTCCTTCAGAGACTACGACTTAAATTTGTAACAAGAAGGAACGAGCGCAAGAGGCAGCGGTTAGAAATAGACCAAGAGAATGACAAAAAGTCGTCACCTGAAAAAAAATCATCACCAAAGCGTCAAAAAACTGATGAGCCTCCTGCCGAGAAACAGTCTACTACATCTGCTGTCGAGGGTTCATCTCAACCAGATAATGAAAAAACTGAAGTGAAACAGAGTAGTCCAACTGATCATGTAGAAGAGACAATGAAGGAGAATGAAATTGATAATGATGAAGACATGGAGGAAGATCCGGAAGAGTACGAAGAAATGGACAATTCAACTCGCAATGATTCATCTAATGAGGCAAGCCTCCTATCTAATGATGAAGATGAGAAGAAGTCTGAAGCAAATGAAGAGGAGAAGGTTGAACCAGATGCAAAGCCTGAAGAAACAGCCGCAAACGAACAAAATGAAGGTGAAGAGTTGTCAAAGAAACCAGACGCAGCAGCTTCTGAGACAAAGATGATTCTTGATACCGACGAATCGAAAACAAAAGCTGCCAACCCAGAGACAAAGAAGAAAGAAGTTTCTTCTCCCAAGGAGGTTGTTGTCGATAAAGAGCTGCTGCAGGCTTTTAGATTTTTTGACCGGAATCGAGTCGGCTATATTAGGGTTGAAGATATGAGGTTGATCATACACAACTTAGGAAAGTTTCTGTCTCACAGGGATGTGAAGGAACTGGTGCAAAGCGCATTGCTCGAGAGCAGCACTGGAAGAGACGACCGGATTCTCTATAATAAGCTGGTCCGAATGCCACCGCTAATTTGA 4167 42.14 MYQNVLLYSSVFWKLGGVYSGSSVGGHDNGSHHSLSSRHASMLGTSQEADASAYRGHSSTTTNYGGQYSSLYSSSSLGGTTQVPPMSVKGSGSSVLEGRGAYASAIPNSPKFSSSEYVSSSNHGYGQKTDPFFPEKVPEYPTLERRQYSERQSTYIARDMQNEQTGRFLDSAGFGHQRHSDMYDRIDPVPLLRQEQLLKVQSLQSSTLDGNARQNDYLAARTTVSRHSAQEVVPYGGRVDADPRSISSLNTSFSSQRTPSILGVAPRRDVDELLYSQSSSNPGYGVSLPPGRDYATGKGLHGTSLESDYSGSILSRSGHSRIDDRKDEKAGYLREFELREEERRRERMRAREKERDREKERERETERERERERERERDRDRERERERDKERERERERLLVRQKLRERENKRGIEIRRERTPPRASRDRGGSSLTKEGKLLRRDSPYHEALHRRHSPIKEKRREYVCKVYSYNFVDVERDYLAIDKRYPRLFIPPEFSKVVVNWPMEELKLSIHTPVSFEHDFIDEGSGDVSKEPCFDVSAVDPTKSEHVNVVWNAKIVLMSGLSRNALEDLSSERSQDNRIPHICNILRFAVLKKDHSIMAIGGPWKSDDGNAPSIDNTSLFQTALRYAKDVTQVDLQNCLHWNRFLEIHYDRLGKDGLFSHKEITVLFVPDLSDCVPSLEVWREQWLTHKKAVADRERQLSKEKSKEKKELAKDKKIQAKMVKNQESLSSKPDGVEDKEKTSKDVNKNSTEKADDGSDKNLDKKVLSEKCVEEEDIEKKKEEVAAGTVKKGKKKVIKKVIKQKVKIGDAGDSATKKNDEQSEKESTEKSMGSDISATQDESLADPTKVKTFVRKKIVKKVPVEKTTDGENKVSQPGSKDENEKDSSEDKKDDPDSVVAVKDNVVKTTVKKKVIKRVPKRKVSGVKSNIGVVDNNVDGKMDETDVATEMAENKVNLSMGEESLEAKKTEKKLAPETKSKGDKDDKEDENKVSTMPKTANEVDRQKKAQNDGNNGEAEKSKDGEKPKDGKGEIGKDGKNESRGSREVKEKKSVDPPRHPGFVLRTKGSKDSKLRSTSLSLDSLLEYTDKDTDESTFELSLFAESLYEMFQYQMGCRIFTFLQRLRLKFVTRRNERKRQRLEIDQENDKKSSPEKKSSPKRQKTDEPPAEKQSTTSAVEGSSQPDNEKTEVKQSSPTDHVEETMKENEIDNDEDMEEDPEEYEEMDNSTRNDSSNEASLLSNDEDEKKSEANEEEKVEPDAKPEETAANEQNEGEELSKKPDAAASETKMILDTDESKTKAANPETKKKEVSSPKEVVVDKELLQAFRFFDRNRVGYIRVEDMRLIIHNLGKFLSHRDVKELVQSALLESSTGRDDRILYNKLVRMPPLI 1388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 39571986 39580018 - BLOR21898 Blo16g01111 72302

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01111 1388 Gene3D - 1317 1385 - -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 1238 1281 - -
Blo16g01111 1388 SMART DBC1_2 581 706 IPR025954 -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 275 326 - -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 303 317 - -
Blo16g01111 1388 Coils Coil 333 377 - -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 111 137 - -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 860 899 - -
Blo16g01111 1388 Pfam DBC1 583 700 IPR025954 -
Blo16g01111 1388 ProSiteProfiles EF-hand calcium-binding domain profile. 1316 1351 IPR002048 GO:0005509
Blo16g01111 1388 MobiDBLite consensus disorder prediction 111 127 - -
Blo16g01111 1388 SUPERFAMILY EF-hand 1319 1364 IPR011992 -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 960 1070 - -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 920 1074 - -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 1287 1311 - -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 731 790 - -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 343 388 - -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 698 846 - -
Blo16g01111 1388 PANTHER CCAR1 HOMOLOG 18 388 - -
Blo16g01111 1388 PANTHER CCAR1 HOMOLOG 368 828 - -
Blo16g01111 1388 PANTHER CCAR1 HOMOLOG 815 1384 - -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 1205 1223 - -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 1138 1166 - -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 412 439 - -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 874 899 - -
Blo16g01111 1388 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 368 828 IPR025224 GO:0006355
Blo16g01111 1388 MobiDBLite consensus disorder prediction 24 60 - -
Blo16g01111 1388 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 815 1384 IPR025224 GO:0006355
Blo16g01111 1388 MobiDBLite consensus disorder prediction 831 845 - -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 802 830 - -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 698 722 - -
Blo16g01111 1388 Pfam BURAN domain 475 562 IPR045354 -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 1167 1188 - -
Blo16g01111 1388 Pfam LAIKA domain 1055 1120 IPR045353 -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 1189 1204 - -
Blo16g01111 1388 MobiDBLite consensus disorder prediction 1138 1311 - -
Blo16g01111 1388 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 18 388 IPR025224 GO:0006355
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01111 K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 - qsu:112005584 893.649
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g936 . Blo16g01111 . . Bpe13g01405 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0569 Cone9ag0575 . . . . . . . . . . . Bma06g00700 . . . . . . . . Cpe07g00648 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007311 0 1 1 1 1 1 2 1 1 1 1 1 2 1 2 2 1 2 1 1 1 1 1 2 1 1 0 1 1 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g01111 Blo_Chr16 FPKM 14.082391 11.826092 0.741264 0.0 4.96872 5.625104 4.604335 0.807524 0.854875 0.701859