Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01112 ATGGCAGTCTCTGGTATTTTCATAATGTGCTTTCTCTTATCACTTTCCTCCGCCAATGGCTATGGAGGAGAAGGCTGGATTAACGCCCACGCCACCTTTTACGGGGGAAGCGATGCCTCAGGAACAATGGGCGGGGCTTGTGGGTACGGAAACCTCTACAGCCAAGGCTATGGCACAAACACAGCAGCTCTAAGCACCGCTCTGTTCAACAGCGGACTGAGCTGTGGCTCTTGTTACGAGATCAGATGCGCCGGCGAGCGGAAATGGTGCATTCCTGGCTCGATTGTGGTGACGGCAACCAACTTTTGCCCGCCCAACAATGCGCTTCCTAACAACGCCGGCGGCTGGTGCAACCCCCCTATGCACCATTTTGACCTTTCTCAGCCTGTCTTTCAACACATTGCGCAGTACAGAGCTGGAATAGTCCCTGTTTCCTACAGAAGGGTACCCTGCAGAAGAAGGGGAGGGATCAGATTCACCATTAACGGCCACTCCTACTTCAACCTGGTCCTGATTACTAACGTGGGCGGCGCCGGCGACGTCCATGCTGTTTCCATCAAAGGGTCTAGTACCGGCTGGCAGCCAATGTCCAGAAACTGGGGCCAGAACTGGCAGAGCAACTCCAACCTCAACGGACAGACCCTTTCGTTTAAAGTCACCACAAGCGACGGCCGGACCATCACGTCCTACAACGTAGCTCCGGCCGGCTGGTCCTTTGGGCGGACCTACAGTGGGGCTCAATTTCAC 747 55.15 MAVSGIFIMCFLLSLSSANGYGGEGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNSGLSCGSCYEIRCAGERKWCIPGSIVVTATNFCPPNNALPNNAGGWCNPPMHHFDLSQPVFQHIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSSTGWQPMSRNWGQNWQSNSNLNGQTLSFKVTTSDGRTITSYNVAPAGWSFGRTYSGAQFH 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 39592483 39593930 + BLOR21899 Blo16g01112 72303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01112 249 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 44 156 IPR007112 -
Blo16g01112 249 PANTHER EXPANSIN 8 249 - -
Blo16g01112 249 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 166 245 IPR007117 -
Blo16g01112 249 SUPERFAMILY Barwin-like endoglucanases 9 174 IPR036908 -
Blo16g01112 249 Pfam Lytic transglycolase 61 146 IPR009009 -
Blo16g01112 249 Pfam Expansin C-terminal domain 157 234 IPR007117 -
Blo16g01112 249 PRINTS Expansin signature 155 167 IPR002963 GO:0009664
Blo16g01112 249 PRINTS Expansin signature 95 105 IPR002963 GO:0009664
Blo16g01112 249 PRINTS Expansin signature 167 188 IPR002963 GO:0009664
Blo16g01112 249 PRINTS Expansin signature 83 94 IPR002963 GO:0009664
Blo16g01112 249 PRINTS Expansin signature 56 70 IPR002963 GO:0009664
Blo16g01112 249 PRINTS Expansin signature 231 247 IPR002963 GO:0009664
Blo16g01112 249 PRINTS Expansin signature 114 131 IPR002963 GO:0009664
Blo16g01112 249 PRINTS Expansin signature 131 144 IPR002963 GO:0009664
Blo16g01112 249 PRINTS Expansin signature 202 223 IPR002963 GO:0009664
Blo16g01112 249 SUPERFAMILY PHL pollen allergen 153 244 IPR036749 -
Blo16g01112 249 Gene3D - 156 249 IPR036749 -
Blo16g01112 249 Gene3D - 14 152 IPR036908 -
Blo16g01112 249 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Blo16g01112 249 PRINTS Expansin/Lol pI family signature 25 40 IPR007118 GO:0005576
Blo16g01112 249 PRINTS Expansin/Lol pI family signature 139 155 IPR007118 GO:0005576
Blo16g01112 249 PRINTS Expansin/Lol pI family signature 231 245 IPR007118 GO:0005576
Blo16g01112 249 PRINTS Expansin/Lol pI family signature 43 61 IPR007118 GO:0005576
Blo16g01112 249 PRINTS Expansin/Lol pI family signature 193 207 IPR007118 GO:0005576
Blo16g01112 249 SMART dpbb_1 61 146 IPR007112 -
Blo16g01112 249 PANTHER EXPANSIN-A15 8 249 IPR002963 GO:0009664
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g00911 Blo16g01112 CCT
Blo06g00911 Blo16g01112 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00187 Blo-Chr4:1518644 Blo16g01112 Blo-Chr16:39592483 2.68E-138 dispersed
Blo10g00137 Blo-Chr10:1545841 Blo16g01112 Blo-Chr16:39592483 4.62E-141 dispersed
Blo10g00222 Blo-Chr10:2866533 Blo16g01112 Blo-Chr16:39592483 7.53E-93 dispersed
Blo11g00580 Blo-Chr11:5668430 Blo16g01112 Blo-Chr16:39592483 7.77E-133 dispersed
Blo13g00832 Blo-Chr13:31013777 Blo16g01112 Blo-Chr16:39592483 8.93E-142 dispersed
Blo15g00315 Blo-Chr15:3642505 Blo16g01112 Blo-Chr16:39592483 1.65E-140 dispersed
Blo16g01112 Blo-Chr16:39592483 Blo07g01176 Blo-Chr7:31647090 4.96E-124 dispersed
Blo16g01112 Blo-Chr16:39592483 Blo17g00731 Blo-Chr17:22268891 2.51E-111 wgd
Blo16g01112 Blo-Chr16:39592483 Blo06g00911 Blo-Chr6:32384409 1.21E-143 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01112 - - pop:7481578 464.536