Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01122 ATGGAGACTTGGTCTTGTTCGGACTCGAGGGCGCTTTCAAGCTCGTGCCTTTCGGAAACTGACTGGCCGGTATCTACTCGTCAGATAGAAGTCGAAATGGCAGACGGGAAACGCCCATTCAGCGTGGATGAAATCGACAAATGCCAAGACGCGAAATTATCGAAGCTTTTCGATTCCGGGAAAAGAGTAAAAAGGGCTAAAAATCAGTGGGATGAAGAGGATTGTTTAGGGTCTTCTTTGGATTCAGATGATCTAATTTCTTCGATTGGGCGAGACAACTTGGTCAGCTGCATGATTCGCTGCTCGAGATCGGATTATGGCTCGATCGCTTATTTGAATCGGAGTTTTCGATGGTTAATTAGATCCGGCGAACTGTACAAGTTGAGGAGGCTAAATGGTGTTGTAGAACATTGGATATATTTTTCGTGCCACCTTCTCGAATGGGAAGCTTTCGATCCAATTCGACATCGATGGATGCATCTGCCGAGAATGACTTCTAACGAATGTTTTATGTGTTCGGATAAGGAATCCCTGGCCGTCGGCACTGAGCTTCTCGTATTCGGCAAGGATTTGACTTCCCAAGTCATTTACAGGTATAGTCTTTTGACCAATTCGTGGTCGTCGGGGATGAGAATGAACAATCCGAGATGTTTGTTTGGGTCAGCCAGCCTCGGAGAGAAGGCGATCTTGGCCGGTGGGAGCGATTCGAGAGGGAAGATTTTGAATTCGGCAGAAATGTATAATTCCGAGACTCGAACTTGGGAGACCCTCCCTGGAATGAACAAGCCAAGAAAGATGTGTTCTGCAGTGTTCATGGACGGAAAATTTTATGTCATTGGAGGAATCGGAGGGAGTAAATCGAATCTTCTAACATGCGGAGAGGAATTCGATTTAGAAACGAAGACTTGGAGAGAAGTTCCTAATATGTCTCCGGTCAGGACGGGGTTGGCCAGGGAATCAGAGGCGGTTTCAACGGCCGAAGCTCCGCCACTCGTTGCAGTCGTAAATAACGAACTTTATGCAGCCGATTATGCGGATATGGAGATAAGAAAATTCAATAAAGATAGAAAGATGTGGTTTAAGGTCGGAAGATTGCCAGAACGGGCAAACTCGATGAACGGATGGGGCCTGGCATTCCGAGCATGCAGGGACCGTCTGGTTGTCATCGGAGGGCCAAAGGCTATGGGCGAAGGCTTCATCGAGCTGAATTCTTGGGTTCCAAGCGAAGGCCCTTCGCAGTGGAACTTGCTTGCCAGAAAGCGATCGGCCAATTTCTTGCTCAGAGAACAAACTAGATTAGTTGGGCTGACATATGCTGAGATTCAATCTATTGTCGTCTATGATTCTGGTTTCTGGTCGGAGAAGTTGTCTGGGTGGATGGGTTATGGGGTTTGGTGGATGGTTTTCACCATTGCAGTGGAATCATCAACTGAAGAACTAGTTTCTCTTCCTCAGCCCCAAGTTCCATTTCGTTTTAGTCTTACTCTCTTCACACTCGTCTCTGTTCTCTTCTCTGCCCGCCGATTTGCTGTATTTCCTCTTCTTTGGCCGTCTTGCTCCTCCAATCTCCCTCTTCGCTGCTCCCCATCCTTCTACATCCCATTCAATTTTCAGTCAATTTCCCACAGAGTGATCTATTCTCTCCGTCAATCGCTACGTGCTCTTCAGAGTATTCCATCGAGCTCCAAAGTCGGCGTCTTTCAAGCTCCGATTTTGTTGTTGTTGTGGGGAAGTATCTCGTTCTGCGAGTGTCGAACCATTCTGGGTTCCCAGAAAACGGCTGAGGGGAAGCTTTGCTGTTCTTGGGGAGGTAGCTTCAATGGAGAATATTACTATAATCTAAAAGAGAGCTCGAATCTCCGAGCTAATCCTGAAACCTACCTAACTGCCAAATCCCGGCCCTTCTCCAGTGGACATGATGAATGGAACGATGCTTGGGAATCTTCTTGGCTGCCGGAGGACCTTACTGCAAAGAACCAATCTCCATGGGAGAATGGTCGGAATTCTACGTCAAATTCGACGGTTTTCCTGTCTTCGGACGTGGATCCGGAGACGAAGGCGTTTGTTGAGGACATGAATGAAAATTGGAACGAGAGGCGTAAAGGGGGAAAGCAAGACAAAGATCCGGAGCAGAAGGAGGGTGAGGGTGTTGGTGGGTCACTTTATAGCTTGGAGAATATGAAGAAAGACTACAGGTTGAAAAAACAAAGGATTCATGCTGGGTTGTGGGTTAAGGAGATCGAGAAGCAAGAGGAGGCCAAGCTAGTGGATTCTATCGCCGGAGGAGGGCATGCTATCGAAAAACTGCTGGATAGTTGTTCTGAGATATTCGACTCAGTCAGTGATGATTTGTACAACTCAAAAATCCCAAGTTCATCTGAGTTCAAGAACAAGCCCGAAGGCTGGGAGACGACATCCAAAACTCCAAACGGAAATGTATGGGAGATGTCTCAAAGTGAAGAAGACATTCTCCTCCAAGAATACGACCGTCGAATCGCATACAACAAATTTCAGATAGCAAGTTTTATCAAGACTCATATATTTAGTAGAAGGAGACCAATTGATGGATGGAAGTACATGATAGAGGAACTCGGACCAAACGCAAAGAAAGGGAAAGGTAGTGTTTCAAGGATACCCGCTCTATCCGACCCATCAACCCAACCTTTCAAGGAGGAAAAGACTCCAAATTCAAGCACTCTCACCCCCTTGAGGAGAAGGTAG 2721 46.82 METWSCSDSRALSSSCLSETDWPVSTRQIEVEMADGKRPFSVDEIDKCQDAKLSKLFDSGKRVKRAKNQWDEEDCLGSSLDSDDLISSIGRDNLVSCMIRCSRSDYGSIAYLNRSFRWLIRSGELYKLRRLNGVVEHWIYFSCHLLEWEAFDPIRHRWMHLPRMTSNECFMCSDKESLAVGTELLVFGKDLTSQVIYRYSLLTNSWSSGMRMNNPRCLFGSASLGEKAILAGGSDSRGKILNSAEMYNSETRTWETLPGMNKPRKMCSAVFMDGKFYVIGGIGGSKSNLLTCGEEFDLETKTWREVPNMSPVRTGLARESEAVSTAEAPPLVAVVNNELYAADYADMEIRKFNKDRKMWFKVGRLPERANSMNGWGLAFRACRDRLVVIGGPKAMGEGFIELNSWVPSEGPSQWNLLARKRSANFLLREQTRLVGLTYAEIQSIVVYDSGFWSEKLSGWMGYGVWWMVFTIAVESSTEELVSLPQPQVPFRFSLTLFTLVSVLFSARRFAVFPLLWPSCSSNLPLRCSPSFYIPFNFQSISHRVIYSLRQSLRALQSIPSSSKVGVFQAPILLLLWGSISFCECRTILGSQKTAEGKLCCSWGGSFNGEYYYNLKESSNLRANPETYLTAKSRPFSSGHDEWNDAWESSWLPEDLTAKNQSPWENGRNSTSNSTVFLSSDVDPETKAFVEDMNENWNERRKGGKQDKDPEQKEGEGVGGSLYSLENMKKDYRLKKQRIHAGLWVKEIEKQEEAKLVDSIAGGGHAIEKLLDSCSEIFDSVSDDLYNSKIPSSSEFKNKPEGWETTSKTPNGNVWEMSQSEEDILLQEYDRRIAYNKFQIASFIKTHIFSRRRPIDGWKYMIEELGPNAKKGKGSVSRIPALSDPSTQPFKEEKTPNSSTLTPLRRR 906
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 39717851 39723628 - BLOR21909 Blo16g01122 72313

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01122 906 MobiDBLite consensus disorder prediction 868 906 - -
Blo16g01122 906 MobiDBLite consensus disorder prediction 694 714 - -
Blo16g01122 906 Gene3D - 137 416 IPR015915 GO:0005515
Blo16g01122 906 MobiDBLite consensus disorder prediction 879 906 - -
Blo16g01122 906 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 2 426 - -
Blo16g01122 906 Pfam Kelch motif 215 261 IPR006652 GO:0005515
Blo16g01122 906 Pfam Kelch motif 263 310 IPR006652 GO:0005515
Blo16g01122 906 SMART kelc_smart 227 274 IPR006652 GO:0005515
Blo16g01122 906 SMART kelc_smart 183 226 IPR006652 GO:0005515
Blo16g01122 906 SMART kelc_smart 275 327 IPR006652 GO:0005515
Blo16g01122 906 MobiDBLite consensus disorder prediction 694 720 - -
Blo16g01122 906 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 2 426 - -
Blo16g01122 906 SUPERFAMILY Kelch motif 145 414 IPR015915 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01122 - - - cit:102625928 612.068
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo06g00901 Blo16g01122 CCT
Blo06g00901 Blo16g01122 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g01114 Blo-Chr13:33281873 Blo16g01122 Blo-Chr16:39717851 7.74E-105 dispersed
Blo14g00174 Blo-Chr14:1360152 Blo16g01122 Blo-Chr16:39717851 2.18E-101 dispersed
Blo16g01122 Blo-Chr16:39717851 Blo18g00297 Blo-Chr18:3110882 1.54E-63 dispersed
Blo01g00188 Blo-Chr1:2568618 Blo16g01122 Blo-Chr16:39717851 3.06E-36 transposed
Blo16g01122 Blo-Chr16:39717851 Blo04g00765 Blo-Chr4:7297218 1.30E-170 wgd
Blo16g01122 Blo-Chr16:39717851 Blo06g00901 Blo-Chr6:32264612 4.09E-177 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g886 . Blo16g01122 . Bda11g01225 Bpe13g01419 Bpe10g00862 Bma14g01637 Bma15g00165 Cmo04g01725 Cmo18g01186 . Cma18g01163 . Car18g01072 . Cpe09g00167 Cpe01g01456 Bhi07g01584 Tan04g1095 . . . . . Cla05g02456 Cam05g2642 Cec05g2675 Cco05g2712 Clacu05g2645 Cmu05g2499 Cre05g2613 Cone13ag0964 Cone19ag0956 Cone6ag0600 Cone9ag0605 Lsi04g00439 Csa05g02435 Chy10g00988 Cme10g00430 Blo06g00901 . Bda07g01463 Bda11g01225 Bpe11g01636 . . Bma06g00678 . . . Cma04g01646 . Car04g01687 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003256 3 4 2 3 3 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 2 0 1 1 1 1 3 2 1 50
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g01122 Blo_Chr16 FPKM 31.335329 28.817429 46.055519 49.416809 50.048553 49.530552 47.947788 24.791937 28.020185 23.882496