Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo16g01125 | ATGGCTTTCTTCCCTGCAAATTTCATGCCACAAGCTCGCCATGAAGATGAACATCAACCTCCCTCTACTCTTAACCCAATTCTTCACCCTTGTACTCCTCAAGACTTTCATGGTGTGGCATCGTTTCTAGGAAAGAGATCCATGTCGTTTTCGGGGATTGAAATGGGGGAAGAAGGGAACAATGGGGAGGACGATTTGTCGGACGATGGATCACTTGCCGGAGAGAAGAAGAGGAGGCTTAATATGGAGCAAGTGAAAACTCTTGAGAAGAACTTCGAGCTGGGAAATAAGCTCGAGCCCGAGAGAAAAATGCAGTTGGCTCGAGCTCTTAATCTGCAACCACGACAGATTGCGATTTGGTTTCAGAACAGAAGAGCAAGGTGGAAGACGAAGCAGTTGGAGAAAGATTATGATCTTCTCAAACGACAGTTTGAAGCCATTAAAGCCGATAACGAAGCTCTACAAACTCAGAATAAAAAGCTTCAGGCAGAGATTATGGGTCTGAAAAGTAGAGAACCAACCGAATCGATCAATCTGAACAAAGAAACAGAAGGATCATGCAGCAATCGGAGCGAGAACAGCTCCGACATAAAACTGGATATCTCCAGAGCAGCCGCCATTGATAGTCCTTTACCCACGAGCAGACCTTTATTTCCTCCCGCCATTAGAGGTCCCGTTGTAACTCAGCTCTTTCAGAACCCATCAAGATCTGAACCCCATTGCCATAAACTAGATCAGATGGTCAAAGAAGAAAGCCTTAGCAACATGTTTTGCGGGATCGAGGATCAGTCCGGCGGGCTGTGGCCATGGTTGGAGAATCAACATTTTAATTGA | 834 | 45.8 | MAFFPANFMPQARHEDEHQPPSTLNPILHPCTPQDFHGVASFLGKRSMSFSGIEMGEEGNNGEDDLSDDGSLAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALNLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKADNEALQTQNKKLQAEIMGLKSREPTESINLNKETEGSCSNRSENSSDIKLDISRAAAIDSPLPTSRPLFPPAIRGPVVTQLFQNPSRSEPHCHKLDQMVKEESLSNMFCGIEDQSGGLWPWLENQHFN | 277 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 39769985 | 39771209 | + | BLOR21912 | Blo16g01125 | 72316 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo16g01125 | 277 | CDD | homeodomain | 76 | 132 | IPR001356 | GO:0003677 | |
Blo16g01125 | 277 | Coils | Coil | 123 | 171 | - | - | |
Blo16g01125 | 277 | MobiDBLite | consensus disorder prediction | 53 | 72 | - | - | |
Blo16g01125 | 277 | Gene3D | - | 69 | 137 | - | - | |
Blo16g01125 | 277 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN | 1 | 277 | IPR045224 | GO:0003700 | |
Blo16g01125 | 277 | SMART | HOX_1 | 74 | 135 | IPR001356 | GO:0003677 | |
Blo16g01125 | 277 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Blo16g01125 | 277 | MobiDBLite | consensus disorder prediction | 172 | 194 | - | - | |
Blo16g01125 | 277 | ProSiteProfiles | 'Homeobox' domain profile. | 71 | 131 | IPR001356 | GO:0003677 | |
Blo16g01125 | 277 | Pfam | Homeobox associated leucine zipper | 131 | 171 | IPR003106 | GO:0006355|GO:0043565 | |
Blo16g01125 | 277 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 | 1 | 277 | - | - | |
Blo16g01125 | 277 | Pfam | Homeodomain | 76 | 129 | IPR001356 | GO:0003677 | |
Blo16g01125 | 277 | ProSitePatterns | 'Homeobox' domain signature. | 106 | 129 | IPR017970 | GO:0000981|GO:0006355 | |
Blo16g01125 | 277 | SUPERFAMILY | Homeodomain-like | 73 | 133 | IPR009057 | - | |
Blo16g01125 | 277 | MobiDBLite | consensus disorder prediction | 179 | 194 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo11g00762 | Blo16g01125 | CCT | |
Blo11g00762 | Blo16g01125 | ECH | |
Blo01g00421 | Blo16g01125 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo11g00762 | Blo-Chr11:10558154 | Blo16g01125 | Blo-Chr16:39769985 | 3.61E-139 | dispersed | |
Blo16g00302 | Blo-Chr16:7401600 | Blo16g01125 | Blo-Chr16:39769985 | 1.14E-37 | dispersed | |
Blo16g01125 | Blo-Chr16:39769985 | Blo16g01135 | Blo-Chr16:39868208 | 3.86E-33 | dispersed | |
Blo01g00421 | Blo-Chr1:4753880 | Blo16g01125 | Blo-Chr16:39769985 | 1.59E-160 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13471 | PF00046 | Homeodomain | 6.60E-15 | CL0123 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo16g01125 | K09338 | - | qsu:112032056 | 424.861 |