Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01125 ATGGCTTTCTTCCCTGCAAATTTCATGCCACAAGCTCGCCATGAAGATGAACATCAACCTCCCTCTACTCTTAACCCAATTCTTCACCCTTGTACTCCTCAAGACTTTCATGGTGTGGCATCGTTTCTAGGAAAGAGATCCATGTCGTTTTCGGGGATTGAAATGGGGGAAGAAGGGAACAATGGGGAGGACGATTTGTCGGACGATGGATCACTTGCCGGAGAGAAGAAGAGGAGGCTTAATATGGAGCAAGTGAAAACTCTTGAGAAGAACTTCGAGCTGGGAAATAAGCTCGAGCCCGAGAGAAAAATGCAGTTGGCTCGAGCTCTTAATCTGCAACCACGACAGATTGCGATTTGGTTTCAGAACAGAAGAGCAAGGTGGAAGACGAAGCAGTTGGAGAAAGATTATGATCTTCTCAAACGACAGTTTGAAGCCATTAAAGCCGATAACGAAGCTCTACAAACTCAGAATAAAAAGCTTCAGGCAGAGATTATGGGTCTGAAAAGTAGAGAACCAACCGAATCGATCAATCTGAACAAAGAAACAGAAGGATCATGCAGCAATCGGAGCGAGAACAGCTCCGACATAAAACTGGATATCTCCAGAGCAGCCGCCATTGATAGTCCTTTACCCACGAGCAGACCTTTATTTCCTCCCGCCATTAGAGGTCCCGTTGTAACTCAGCTCTTTCAGAACCCATCAAGATCTGAACCCCATTGCCATAAACTAGATCAGATGGTCAAAGAAGAAAGCCTTAGCAACATGTTTTGCGGGATCGAGGATCAGTCCGGCGGGCTGTGGCCATGGTTGGAGAATCAACATTTTAATTGA 834 45.8 MAFFPANFMPQARHEDEHQPPSTLNPILHPCTPQDFHGVASFLGKRSMSFSGIEMGEEGNNGEDDLSDDGSLAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALNLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKADNEALQTQNKKLQAEIMGLKSREPTESINLNKETEGSCSNRSENSSDIKLDISRAAAIDSPLPTSRPLFPPAIRGPVVTQLFQNPSRSEPHCHKLDQMVKEESLSNMFCGIEDQSGGLWPWLENQHFN 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 39769985 39771209 + BLOR21912 Blo16g01125 72316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01125 277 CDD homeodomain 76 132 IPR001356 GO:0003677
Blo16g01125 277 Coils Coil 123 171 - -
Blo16g01125 277 MobiDBLite consensus disorder prediction 53 72 - -
Blo16g01125 277 Gene3D - 69 137 - -
Blo16g01125 277 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 277 IPR045224 GO:0003700
Blo16g01125 277 SMART HOX_1 74 135 IPR001356 GO:0003677
Blo16g01125 277 MobiDBLite consensus disorder prediction 1 23 - -
Blo16g01125 277 MobiDBLite consensus disorder prediction 172 194 - -
Blo16g01125 277 ProSiteProfiles 'Homeobox' domain profile. 71 131 IPR001356 GO:0003677
Blo16g01125 277 Pfam Homeobox associated leucine zipper 131 171 IPR003106 GO:0006355|GO:0043565
Blo16g01125 277 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 1 277 - -
Blo16g01125 277 Pfam Homeodomain 76 129 IPR001356 GO:0003677
Blo16g01125 277 ProSitePatterns 'Homeobox' domain signature. 106 129 IPR017970 GO:0000981|GO:0006355
Blo16g01125 277 SUPERFAMILY Homeodomain-like 73 133 IPR009057 -
Blo16g01125 277 MobiDBLite consensus disorder prediction 179 194 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo11g00762 Blo16g01125 CCT
Blo11g00762 Blo16g01125 ECH
Blo01g00421 Blo16g01125 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00762 Blo-Chr11:10558154 Blo16g01125 Blo-Chr16:39769985 3.61E-139 dispersed
Blo16g00302 Blo-Chr16:7401600 Blo16g01125 Blo-Chr16:39769985 1.14E-37 dispersed
Blo16g01125 Blo-Chr16:39769985 Blo16g01135 Blo-Chr16:39868208 3.86E-33 dispersed
Blo01g00421 Blo-Chr1:4753880 Blo16g01125 Blo-Chr16:39769985 1.59E-160 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13471 PF00046 Homeodomain 6.60E-15 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01125 K09338 - qsu:112032056 424.861