Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo16g01131 | ATGGCGGAATTTGGAGTTAAGGCGCTTGTTTTGTTGTTATTGGGTGTCGTAGCCAACGCTCACATCGGAGAGTTTGATGATTACTGGAAAAATCGAGCAGCGGAAGCCAAATTGGCGGCTCTTGACGCATACGATCCTAACCCGGAGGCCGTTACCGATAGTTTCAACGCTCAAGTTGGCAAAGCAATTGCGGGAGCAAACAGCACAAGAAGAAATCTGCGGACAAACAAGGGCCCATGCAGGGCGACGAACCCCATTGACAGGTGTTGGAGGTGCGATCCAAACTGGGCGAACAACCGGAAGAAGCTAGCCAGCTGCGTTCTGGGGTTCGGCCGGAAGACGTTCGGAGGAAAATACGGACCATATTACGTCGTCACAGACTCCTCCGACTCTGATCTACTCAACCCTAAACCAGGAACTCTCCGGCACGCCGTGATTCAGAAACAACCCCTCTGGATCATCTTCGCCAGAAGCATGGTCATTCGCCTGACCCAAGAGCTAATGGTGAACAGCCACAAAACCATTGACGCTCGAGGAGTCAACGTCCATATCGCGTTCGGAGCCGGAATTACGGTCCAGTTTGTGAAGAATGTGATCATCCATGGCCTCCATATCCACGACATTGTTATCGGCACCGGCGGACTTATCAGAGATTCCGTCGACCATTATGGGTTTAGAACGAAGAGTGATGGCGATGGAATTTCAATCTTTGGAGCTTCAAATGTTTGGATCGACCACATTTCCATGTCCAACTGCCAAGACGGACTAATCGACGCTATCATGGGGTCTACTGCTATCACCATCTCCAACTGTCACTTCACTCACCATAACGAGGTGATGCTGTTCGGAGCGAGCGACAGCTATTCCGGCGACGCAATAATGCAAGTGACGGTAGCTTTCAACCATTTCGGAAGAGGGTTAGTGCAGAGGATGCCGAGATGCAGATGGGGCTTCTTCCACGTCGTTAACAATGACTACACCCACTGGCTCATGTACGCCATTGGAGGCAGCCAACACCCCACCATTGTTAGCCAAGGGAATCGCTTTATTGCTCCTCACAATGCAGCAGCTAAAGAGGTGACGAAGAGGGATTATGCACCAGAAGATGTGTGGAAAAACTGGATATGGAGATCAGAGGGAGATCTACTAGTGAATGGAGCATTCTTTGTGAGATCAGGAGATCAAAGTAGAAGGAGGCCATTTCACAGGCTGGATATGATCTCCTACAAGCCCGGGACTTTCGTCAGCCGGCTAACTCGCTTTTCCGGTGCCCTTGTTTGCTTCATCGGACGGCCATGTTAG | 1302 | 50.69 | MAEFGVKALVLLLLGVVANAHIGEFDDYWKNRAAEAKLAALDAYDPNPEAVTDSFNAQVGKAIAGANSTRRNLRTNKGPCRATNPIDRCWRCDPNWANNRKKLASCVLGFGRKTFGGKYGPYYVVTDSSDSDLLNPKPGTLRHAVIQKQPLWIIFARSMVIRLTQELMVNSHKTIDARGVNVHIAFGAGITVQFVKNVIIHGLHIHDIVIGTGGLIRDSVDHYGFRTKSDGDGISIFGASNVWIDHISMSNCQDGLIDAIMGSTAITISNCHFTHHNEVMLFGASDSYSGDAIMQVTVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIVSQGNRFIAPHNAAAKEVTKRDYAPEDVWKNWIWRSEGDLLVNGAFFVRSGDQSRRRPFHRLDMISYKPGTFVSRLTRFSGALVCFIGRPC | 433 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 39837804 | 39840287 | - | BLOR21918 | Blo16g01131 | 72322 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo16g01131 | 433 | PANTHER | PECTATE LYASE | 16 | 433 | - | - | |
Blo16g01131 | 433 | SUPERFAMILY | Pectin lyase-like | 84 | 424 | IPR011050 | - | |
Blo16g01131 | 433 | PANTHER | PECTATE LYASE 18-RELATED | 16 | 433 | IPR045032 | GO:0030570 | |
Blo16g01131 | 433 | Pfam | Pectate lyase, N terminus | 21 | 73 | IPR007524 | GO:0030570 | |
Blo16g01131 | 433 | Pfam | Pectate lyase | 168 | 349 | IPR002022 | - | |
Blo16g01131 | 433 | SMART | amb_all | 158 | 355 | IPR002022 | - | |
Blo16g01131 | 433 | PRINTS | Pollen allergen Amb family signature | 106 | 123 | IPR018082 | - | |
Blo16g01131 | 433 | PRINTS | Pollen allergen Amb family signature | 166 | 182 | IPR018082 | - | |
Blo16g01131 | 433 | PRINTS | Pollen allergen Amb family signature | 130 | 155 | IPR018082 | - | |
Blo16g01131 | 433 | PRINTS | Pollen allergen Amb family signature | 374 | 398 | IPR018082 | - | |
Blo16g01131 | 433 | PRINTS | Pollen allergen Amb family signature | 230 | 251 | IPR018082 | - | |
Blo16g01131 | 433 | PRINTS | Pollen allergen Amb family signature | 332 | 351 | IPR018082 | - | |
Blo16g01131 | 433 | PRINTS | Pollen allergen Amb family signature | 404 | 427 | IPR018082 | - | |
Blo16g01131 | 433 | PRINTS | Pollen allergen Amb family signature | 310 | 329 | IPR018082 | - | |
Blo16g01131 | 433 | Gene3D | - | 83 | 426 | IPR012334 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo16g01131 | Blo-Chr16:39837804 | Blo14g00306 | Blo-Chr14:3136127 | 1.69E-166 | dispersed | |
Blo17g00352 | Blo-Chr17:3723371 | Blo16g01131 | Blo-Chr16:39837804 | 0 | transposed | |
Blo01g00418 | Blo-Chr1:4714030 | Blo16g01131 | Blo-Chr16:39837804 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo16g01131 | K01728 | - | csv:101206497 | 716.072 |